RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 SLC5A7Q9GZV3 580 aa18.7■□□□□ 0.58
SMAD1-201ENST00000302085 SHARPINQ9H0F6 387 aa18.7■□□□□ 0.58
SMAD1-201ENST00000302085 OR1A1Q9P1Q5 309 aa18.7■□□□□ 0.58
SMAD1-201ENST00000302085 ZDHHC8Q9ULC8 765 aa18.7■□□□□ 0.58
SMAD1-201ENST00000302085 IGKV1D-17A0A075B6S4 117 aa18.7■□□□□ 0.58
SMAD1-201ENST00000302085 HMGN3Q15651 99 aa18.7■□□□□ 0.58
SMAD1-201ENST00000302085 C11orf87Q6NUJ2 197 aa18.7■□□□□ 0.58
SMAD1-201ENST00000302085 TMEM65Q6PI78 240 aa18.7■□□□□ 0.58
SMAD1-201ENST00000302085 ZNF565Q8N9K5 539 aa18.7■□□□□ 0.58
SMAD1-201ENST00000302085 IL1F10Q8WWZ1 152 aa18.7■□□□□ 0.58
SMAD1-201ENST00000302085 TAF9BQ9HBM6 251 aa18.7■□□□□ 0.58
SMAD1-201ENST00000302085 NGBQ9NPG2 151 aa18.7■□□□□ 0.58
SMAD1-201ENST00000302085 IL19Q9UHD0 177 aa18.7■□□□□ 0.58
SMAD1-201ENST00000302085 KIF25Q9UIL4 384 aa18.7■□□□□ 0.58
SMAD1-201ENST00000302085 CACNA1AO00555 2505 aa18.69■□□□□ 0.58
SMAD1-201ENST00000302085 IGHV3OR15-7A0A075B7D8 119 aa18.69■□□□□ 0.58
SMAD1-201ENST00000302085 NKX2-6A6NCS4 301 aa18.69■□□□□ 0.58
SMAD1-201ENST00000302085 NPIPB11E5RHQ5 1161 aa18.69■□□□□ 0.58
SMAD1-201ENST00000302085 MPPED1O15442 326 aa18.69■□□□□ 0.58
SMAD1-201ENST00000302085 ZZEF1O43149 2961 aa18.69■□□□□ 0.58
SMAD1-201ENST00000302085 CYCSP99999 105 aaKnown RBP18.69■□□□□ 0.58
SMAD1-201ENST00000302085 NCMAPQ5T1S8 102 aa18.69■□□□□ 0.58
SMAD1-201ENST00000302085 ZNF818PQ6ZRF7 136 aa18.69■□□□□ 0.58
SMAD1-201ENST00000302085 TMUB2Q71RG4 321 aa18.69■□□□□ 0.58
SMAD1-201ENST00000302085 CCDC71LQ8N9Z2 235 aa18.69■□□□□ 0.58
SMAD1-201ENST00000302085 UBALD1Q8TB05 177 aa18.69■□□□□ 0.58
SMAD1-201ENST00000302085 GCM1Q9NP62 436 aa18.69■□□□□ 0.58
SMAD1-201ENST00000302085 CCL28Q9NRJ3 127 aa18.69■□□□□ 0.58
SMAD1-201ENST00000302085 OR2W1Q9Y3N9 320 aa18.69■□□□□ 0.58
SMAD1-201ENST00000302085 MED19A0JLT2 244 aaPredicted RBP18.68■□□□□ 0.58
SMAD1-201ENST00000302085 ZNF546Q86UE3 836 aa18.68■□□□□ 0.58
SMAD1-201ENST00000302085 SLC7A5P1Q8MH63 180 aa18.68■□□□□ 0.58
SMAD1-201ENST00000302085 PRR18Q8N4B5 295 aa18.68■□□□□ 0.58
SMAD1-201ENST00000302085 OR8H1Q8NGG4 311 aa18.68■□□□□ 0.58
SMAD1-201ENST00000302085 RNASE6Q93091 150 aaKnown RBP18.68■□□□□ 0.58
SMAD1-201ENST00000302085 C2orf50Q96LR7 162 aa18.68■□□□□ 0.58
SMAD1-201ENST00000302085 SUCNR1Q9BXA5 334 aa18.68■□□□□ 0.58
SMAD1-201ENST00000302085 SEBOXQ9HB31 216 aaPredicted RBP18.68■□□□□ 0.58
SMAD1-201ENST00000302085 DNAJB11Q9UBS4 358 aa18.68■□□□□ 0.58
SMAD1-201ENST00000302085 SHISA9B4DS77 424 aa18.68■□□□□ 0.58
SMAD1-201ENST00000302085 GPR31O00270 319 aa18.68■□□□□ 0.58
SMAD1-201ENST00000302085 RPA2P15927 270 aa18.68■□□□□ 0.58
SMAD1-201ENST00000302085 PSMB6P28072 239 aa18.68■□□□□ 0.58
SMAD1-201ENST00000302085 CDSNQ15517 529 aa18.68■□□□□ 0.58
SMAD1-201ENST00000302085 TEX261Q6UWH6 196 aa18.68■□□□□ 0.58
SMAD1-201ENST00000302085 DMRTC2Q8IXT2 367 aaPredicted RBP18.68■□□□□ 0.58
SMAD1-201ENST00000302085 FAM185AQ8N0U4 392 aa18.68■□□□□ 0.58
SMAD1-201ENST00000302085 LILRB4Q8NHJ6 448 aa18.68■□□□□ 0.58
SMAD1-201ENST00000302085 GLYATL2Q8WU03 294 aa18.68■□□□□ 0.58
SMAD1-201ENST00000302085 MFFQ9GZY8 342 aa18.68■□□□□ 0.58
SMAD1-201ENST00000302085 ERRFI1Q9UJM3 462 aaPredicted RBP18.68■□□□□ 0.58
SMAD1-201ENST00000302085 U3KQ87 197 aa18.68■□□□□ 0.58
SMAD1-201ENST00000302085 ZNF737O75373 536 aa18.67■□□□□ 0.58
SMAD1-201ENST00000302085 TNFSF4P23510 183 aa18.67■□□□□ 0.58
SMAD1-201ENST00000302085 GRNP28799 593 aaKnown RBP18.67■□□□□ 0.58
SMAD1-201ENST00000302085 RND3P61587 244 aa18.67■□□□□ 0.58
SMAD1-201ENST00000302085 IL15RAQ13261 267 aa18.67■□□□□ 0.58
SMAD1-201ENST00000302085 LINC01560Q8TB33 94 aa18.67■□□□□ 0.58
SMAD1-201ENST00000302085 M0R233 179 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 HSD17B6O14756 317 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 HEXAP06865 529 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 GLIPR1P48060 266 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 TESK1Q15569 626 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 FAM201AQ5SY85 155 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 LIAT1Q6ZQX7 453 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 ZNF767PQ75MW2 155 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 LRTM2Q8N967 370 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 MSI2Q96DH6 328 aaKnown RBP18.66■□□□□ 0.58
SMAD1-201ENST00000302085 PLPPR2Q96GM1 343 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 TP53RKQ96S44 253 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 RNF126Q9BV68 326 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 ESRP2Q9H6T0 727 aaKnown RBP18.66■□□□□ 0.58
SMAD1-201ENST00000302085 KCNIP1Q9NZI2 227 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 COQ3Q9NZJ6 369 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 RNF7Q9UBF6 113 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 S100A11P31949 105 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 KRBOX4Q5JUW0 171 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 GGNBP1Q5YKI7 109 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 TBC1D26Q86UD7 250 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 ZNF680Q8NEM1 530 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 OR1L1Q8NH94 360 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 TNFSF18Q9UNG2 199 aa18.66■□□□□ 0.58
SMAD1-201ENST00000302085 C3orf85A0A1B0GTC6 90 aa18.65■□□□□ 0.58
SMAD1-201ENST00000302085 PHF1O43189 567 aaPredicted RBP18.65■□□□□ 0.58
SMAD1-201ENST00000302085 ADH4P08319 380 aa18.65■□□□□ 0.58
SMAD1-201ENST00000302085 C4BPBP20851 252 aa18.65■□□□□ 0.58
SMAD1-201ENST00000302085 GABRA2P47869 451 aa18.65■□□□□ 0.58
SMAD1-201ENST00000302085 THAP6Q8TBB0 222 aa18.65■□□□□ 0.58
SMAD1-201ENST00000302085 NEUROG1Q92886 237 aa18.65■□□□□ 0.58
SMAD1-201ENST00000302085 C18orf12Q96KH6 178 aa18.65■□□□□ 0.58
SMAD1-201ENST00000302085 GPHA2Q96T91 129 aa18.65■□□□□ 0.58
SMAD1-201ENST00000302085 C17orf100A8MU93 164 aa18.64■□□□□ 0.58
SMAD1-201ENST00000302085 C12orf77C9JDV5 145 aa18.64■□□□□ 0.58
SMAD1-201ENST00000302085 E7EQL1 145 aa18.64■□□□□ 0.58
SMAD1-201ENST00000302085 CD80P33681 288 aa18.64■□□□□ 0.58
SMAD1-201ENST00000302085 NDUFA5Q16718 116 aa18.64■□□□□ 0.58
SMAD1-201ENST00000302085 TPRX1Q8N7U7 411 aa18.64■□□□□ 0.58
SMAD1-201ENST00000302085 Q8TCH9 128 aa18.64■□□□□ 0.58
SMAD1-201ENST00000302085 FAM222BQ8WU58 562 aa18.64■□□□□ 0.58
SMAD1-201ENST00000302085 VRK1Q99986 396 aaPredicted RBP18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms