RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 SP1P08047 785 aa13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 SFTA3P0C7M3 94 aa13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 CLDN18P56856 261 aa13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 TRIP6Q15654 476 aaKnown RBP13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 RBMS3Q6XE24 437 aaKnown RBP13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 OR1J1Q8NGS3 322 aa13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 HPSE2Q8WWQ2 592 aa13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 DNAJB11Q9UBS4 358 aa13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 C3orf85A0A1B0GTC6 90 aa13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 KLRC4-KLRK1H3BQV0 150 aa13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 ST8SIA3O43173 380 aa13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 ACAA1P09110 424 aaPredicted RBP13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 HOXC12P31275 282 aa13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 NKX2-1P43699 371 aaPredicted RBP13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 IL15RAQ13261 267 aa13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 OR8G2PQ6IF36 304 aa13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 BTNL3Q6UXE8 466 aa13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 SSX9Q7RTT3 188 aa13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 DEFB108BQ8NET1 73 aa13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 SPACA1Q9HBV2 294 aa13.36□□□□□ -0.27
CHAF1A-201ENST00000301280 CD59P13987 128 aa13.35□□□□□ -0.27
CHAF1A-201ENST00000301280 MEOX2P50222 304 aa13.35□□□□□ -0.27
CHAF1A-201ENST00000301280 GFRA1P56159 465 aa13.35□□□□□ -0.27
CHAF1A-201ENST00000301280 CLEC12BQ2HXU8 276 aa13.35□□□□□ -0.27
CHAF1A-201ENST00000301280 DECR2Q9NUI1 292 aa13.35□□□□□ -0.27
CHAF1A-201ENST00000301280 COLCA2A8K830 154 aa13.35□□□□□ -0.27
CHAF1A-201ENST00000301280 TXNL1O43396 289 aa13.35□□□□□ -0.27
CHAF1A-201ENST00000301280 CYTIPO60759 359 aa13.35□□□□□ -0.27
CHAF1A-201ENST00000301280 ZNF154Q13106 437 aa13.35□□□□□ -0.27
CHAF1A-201ENST00000301280 LGI3Q8N145 548 aa13.35□□□□□ -0.27
CHAF1A-201ENST00000301280 FGF23Q9GZV9 251 aaPredicted RBP13.35□□□□□ -0.27
CHAF1A-201ENST00000301280 NSG2Q9Y328 171 aa13.35□□□□□ -0.27
CHAF1A-201ENST00000301280 KMT2EQ8IZD2 1858 aa13.35□□□□□ -0.27
CHAF1A-201ENST00000301280 RPS2P15880 293 aaKnown RBP13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 OR2B8PP59922 312 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 PRAMEF6Q5VXH4 476 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 Q6ZPA2 131 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 TMEM9BQ9NQ34 198 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 RCC2Q9P258 522 aaKnown RBP13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 ATPIF1Q9UII2 106 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 KRASP01116 189 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 IGHEP01854 428 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 GABRA2P47869 451 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 ZNF816Q0VGE8 651 aaPredicted RBP13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 HABP2Q14520 560 aaPredicted RBP13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 SUMF2Q8NBJ7 301 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 OR2G3Q8NGZ4 309 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 SFT2D1Q8WV19 159 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 C14orf79Q96F83 325 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 LINC00587B1AMM8 73 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 B4E171 279 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 RNASEK-C17orf49H0YIS7 233 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 CTSDP07339 412 aaPredicted RBP13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 PPP1CCP36873 323 aaKnown RBP13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 TSPAN7P41732 249 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 FDCSPQ8NFU4 85 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 OR5C1Q8NGR4 320 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 NRIP2Q9BQI9 281 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 RGCCQ9H4X1 137 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 LPAR3Q9UBY5 353 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 ZNF292O60281 2723 aa13.34□□□□□ -0.27
CHAF1A-201ENST00000301280 ELLP55199 621 aaPredicted RBP13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 OR10J5Q8NHC4 309 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 APOBEC3DQ96AK3 386 aaPredicted RBP13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 DCTN5Q9BTE1 182 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 WFDC1Q9HC57 220 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 BORCS7-ASMTA0A0B4J1R7 106 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 A0A1W2PPE3 182 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 PQLC2LA1A4F0 135 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 CRYM-AS1A6NIL9 109 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 MPPED1O15442 326 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 DNPH1O43598 174 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 MMP7P09237 267 aaPredicted RBP13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 ACP1P24666 158 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 SNRPEP62304 92 aaKnown RBP13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 NAAAQ02083 359 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 EIF5AL1Q6IS14 154 aaKnown RBP13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 ADGRG7Q96K78 797 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 ZFP57Q9NU63 452 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 FAM157AC9JC47 383 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 PSG2P11465 335 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 WNT5AP41221 380 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 FGF8P55075 233 aaPredicted RBP13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 ADAM5Q6NVV9 412 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 LCN15Q6UWW0 184 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 SLC16A13Q7RTY0 426 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 CMTM1Q8IZ96 169 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 RARRES2Q99969 163 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 SEC11CQ9BY50 192 aa13.33□□□□□ -0.28
CHAF1A-201ENST00000301280 RRP8O43159 456 aaKnown RBP13.32□□□□□ -0.28
CHAF1A-201ENST00000301280 CHST1O43916 411 aa13.32□□□□□ -0.28
CHAF1A-201ENST00000301280 METTL15P1P0C7V9 234 aa13.32□□□□□ -0.28
CHAF1A-201ENST00000301280 ARL6IP1Q15041 203 aa13.32□□□□□ -0.28
CHAF1A-201ENST00000301280 SPANXN5Q5MJ07 72 aa13.32□□□□□ -0.28
CHAF1A-201ENST00000301280 ASCL4Q6XD76 172 aa13.32□□□□□ -0.28
CHAF1A-201ENST00000301280 LIAT1Q6ZQX7 453 aa13.32□□□□□ -0.28
CHAF1A-201ENST00000301280 FAM58AQ8N1B3 248 aa13.32□□□□□ -0.28
CHAF1A-201ENST00000301280 MMP26Q9NRE1 261 aa13.32□□□□□ -0.28
CHAF1A-201ENST00000301280 AESQ08117 197 aa13.32□□□□□ -0.28
CHAF1A-201ENST00000301280 GPR157Q5UAW9 335 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms