RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 TEX13DA0A0J9YY54 714 aaPredicted RBP13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 OOEPA6NGQ2 149 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 DEFB108AA8MXU0 73 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 NPIPB11E5RHQ5 1161 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 SIAH2O43255 324 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 CYB5R3P00387 301 aaPredicted RBP13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 PLAUP00749 431 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 MUC1P15941 1255 aaPredicted RBP13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 CD80P33681 288 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 H2BFSP57053 126 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 PIGPP57054 158 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 SUPT4H1P63272 117 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 HMGN3Q15651 99 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 C2orf68Q2NKX9 166 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 C1orf87Q8N0U7 546 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 ZNF843Q8N446 348 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 ZNF565Q8N9K5 539 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 OR5M8Q8NGP6 311 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 IL1F10Q8WWZ1 152 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 TMEM204Q9BSN7 226 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 SHARPINQ9H0F6 387 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 SHPKQ9UHJ6 478 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 KIF25Q9UIL4 384 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 METRNQ9UJH8 293 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 TRAV39A0A0B4J263 110 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 CRYM-AS1A6NIL9 109 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 MGST3O14880 152 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 ZNF737O75373 536 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 TUSC2O75896 110 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 IFNA2P01563 188 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 TFF1P04155 84 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 HLA-GP17693 338 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 DNASE1P24855 282 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 SLC9A3R2Q15599 337 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 C6orf183Q5T699 404 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 KCTD9Q7L273 389 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 ZCCHC24Q8N2G6 241 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 PRR18Q8N4B5 295 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 CCDC71LQ8N9Z2 235 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 ANGPTL6Q8NI99 470 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 COQ2Q96H96 371 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 RSRP1Q9BUV0 290 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 TAF9BQ9HBM6 251 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 PIPOXQ9P0Z9 390 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 KCNIP3Q9Y2W7 256 aa13.16□□□□□ -0.3
HERPUD1-201ENST00000300302 ADGRG4Q8IZF6 3080 aa13.15□□□□□ -0.3
HERPUD1-201ENST00000300302 C1QL1O75973 258 aa13.15□□□□□ -0.3
HERPUD1-201ENST00000300302 SIX6O95475 246 aa13.15□□□□□ -0.3
HERPUD1-201ENST00000300302 RPS2P15880 293 aaKnown RBP13.15□□□□□ -0.3
HERPUD1-201ENST00000300302 RBMXP38159 391 aaKnown RBP13.15□□□□□ -0.3
HERPUD1-201ENST00000300302 SNRPD2P62316 118 aaKnown RBP13.15□□□□□ -0.3
HERPUD1-201ENST00000300302 IFITM2Q01629 132 aa13.15□□□□□ -0.3
HERPUD1-201ENST00000300302 MST1LQ2TV78 715 aa13.15□□□□□ -0.3
HERPUD1-201ENST00000300302 TRAT1Q6PIZ9 186 aa13.15□□□□□ -0.3
HERPUD1-201ENST00000300302 C5orf24Q7Z6I8 188 aa13.15□□□□□ -0.3
HERPUD1-201ENST00000300302 FAM185AQ8N0U4 392 aa13.15□□□□□ -0.3
HERPUD1-201ENST00000300302 MUC15Q8N387 334 aa13.15□□□□□ -0.3
HERPUD1-201ENST00000300302 ZNF561Q8N587 486 aa13.15□□□□□ -0.3
HERPUD1-201ENST00000300302 SLC2A9Q9NRM0 540 aa13.15□□□□□ -0.3
HERPUD1-201ENST00000300302 OPN4Q9UHM6 478 aa13.15□□□□□ -0.3
HERPUD1-201ENST00000300302 HCFC1P51610 2035 aa13.15□□□□□ -0.3
HERPUD1-201ENST00000300302 DIDO1Q9BTC0 2240 aaKnown RBP13.15□□□□□ -0.3
HERPUD1-201ENST00000300302 NBASA2RRP1 2371 aa13.15□□□□□ -0.31
HERPUD1-201ENST00000300302 DBX1A6NMT0 343 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 HSPA12AO43301 675 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 RGS11O94810 467 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 TEX36Q5VZQ5 186 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 STUMQ69YW2 141 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 H1FOOQ8IZA3 346 aaPredicted RBP13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 OR5D13Q8NGL4 314 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 RTN4IP1Q8WWV3 396 aaPredicted RBP13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 GALMQ96C23 342 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 PDCD10Q9BUL8 212 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 DNTTIP1Q9H147 329 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 OR2W1Q9Y3N9 320 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 K7N7A8 449 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 LOXP28300 417 aaPredicted RBP13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 GLIPR1P48060 266 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 EDDM3AQ14507 147 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 SWI5Q1ZZU3 235 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 PHLDA2Q53GA4 152 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 LY6G6FQ5SQ64 297 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 FAM201AQ5SY85 155 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 DCAF12L2Q5VW00 463 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 SECTM1Q8WVN6 248 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 SDSLQ96GA7 329 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 LURAP1Q96LR2 239 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 SLC5A7Q9GZV3 580 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 NAA60Q9H7X0 242 aa13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 PAIP2BQ9ULR5 123 aaKnown RBP13.14□□□□□ -0.31
HERPUD1-201ENST00000300302 ICE1Q9Y2F5 2266 aa13.13□□□□□ -0.31
HERPUD1-201ENST00000300302 DYSFO75923 2080 aa13.13□□□□□ -0.31
HERPUD1-201ENST00000300302 TRAV38-1A0A0B4J264 116 aa13.13□□□□□ -0.31
HERPUD1-201ENST00000300302 IL2RGP31785 369 aa13.13□□□□□ -0.31
HERPUD1-201ENST00000300302 ZNRF1Q8ND25 227 aa13.13□□□□□ -0.31
HERPUD1-201ENST00000300302 VRK1Q99986 396 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-201ENST00000300302 ZNF665Q9H7R5 613 aa13.13□□□□□ -0.31
HERPUD1-201ENST00000300302 RAB18Q9NP72 206 aa13.13□□□□□ -0.31
HERPUD1-201ENST00000300302 FBXO9Q9UK97 447 aaPredicted RBP13.13□□□□□ -0.31
HERPUD1-201ENST00000300302 C12orf77C9JDV5 145 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms