RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 POC1AQ8NBT0 407 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 ADAMTS17Q8TE56 1095 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 ZIC3O60481 467 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 NPIPB7O75200 414 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 SELENOVP59797 346 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 H3F3AP84243 136 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 DHODHQ02127 395 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 SLC10A1Q14973 349 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 WDFY1Q8IWB7 410 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 PINX1Q96BK5 328 aaKnown RBP11.53□□□□□ -0.56
CASC4-201ENST00000299957 TRIB1Q96RU8 372 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 TMEM38BQ9NVV0 291 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 PSG11Q9UQ72 335 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 LINC00587B1AMM8 73 aa11.52□□□□□ -0.56
CASC4-201ENST00000299957 KITLGP21583 273 aa11.52□□□□□ -0.56
CASC4-201ENST00000299957 C15orf54Q8N8G6 183 aa11.52□□□□□ -0.56
CASC4-201ENST00000299957 ZNF383Q8NA42 475 aa11.52□□□□□ -0.56
CASC4-201ENST00000299957 MEGF10Q96KG7 1140 aa11.52□□□□□ -0.56
CASC4-201ENST00000299957 TMEM100Q9NV29 134 aa11.52□□□□□ -0.56
CASC4-201ENST00000299957 HS3ST3B1Q9Y662 390 aa11.52□□□□□ -0.56
CASC4-201ENST00000299957 NCOA6Q14686 2063 aaPredicted RBP11.52□□□□□ -0.56
CASC4-201ENST00000299957 SLC25A6P12236 298 aa11.52□□□□□ -0.57
CASC4-201ENST00000299957 SNCAP37840 140 aa11.52□□□□□ -0.57
CASC4-201ENST00000299957 P2RY1P47900 373 aa11.52□□□□□ -0.57
CASC4-201ENST00000299957 ZP4Q12836 540 aa11.52□□□□□ -0.57
CASC4-201ENST00000299957 LURAP1Q96LR2 239 aa11.52□□□□□ -0.57
CASC4-201ENST00000299957 PARP11Q9NR21 331 aa11.52□□□□□ -0.57
CASC4-201ENST00000299957 TGIF2-C20orf24A0A0A6YYL0 155 aa11.52□□□□□ -0.57
CASC4-201ENST00000299957 Q3ZCU0 254 aa11.52□□□□□ -0.57
CASC4-201ENST00000299957 APOBEC3DQ96AK3 386 aaPredicted RBP11.52□□□□□ -0.57
CASC4-201ENST00000299957 AQP10Q96PS8 301 aa11.52□□□□□ -0.57
CASC4-201ENST00000299957 OR2D2Q9H210 308 aa11.52□□□□□ -0.57
CASC4-201ENST00000299957 ARHGAP21Q5T5U3 1957 aa11.52□□□□□ -0.57
CASC4-201ENST00000299957 VDAC1P21796 283 aa11.52□□□□□ -0.57
CASC4-201ENST00000299957 NAAAQ02083 359 aa11.52□□□□□ -0.57
CASC4-201ENST00000299957 IL13RA2Q14627 380 aa11.52□□□□□ -0.57
CASC4-201ENST00000299957 TBC1D28Q2M2D7 210 aa11.52□□□□□ -0.57
CASC4-201ENST00000299957 WDR74Q6RFH5 385 aaPredicted RBP11.52□□□□□ -0.57
CASC4-201ENST00000299957 OR2Y1Q8NGV0 311 aa11.52□□□□□ -0.57
CASC4-201ENST00000299957 GPR35Q9HC97 309 aa11.52□□□□□ -0.57
CASC4-201ENST00000299957 NTF3P20783 257 aa11.51□□□□□ -0.57
CASC4-201ENST00000299957 FKBP2P26885 142 aaKnown RBP11.51□□□□□ -0.57
CASC4-201ENST00000299957 HLA-DRB3P79483 266 aa11.51□□□□□ -0.57
CASC4-201ENST00000299957 SLC38A11Q08AI6 406 aa11.51□□□□□ -0.57
CASC4-201ENST00000299957 SLC23A3Q6PIS1 610 aa11.51□□□□□ -0.57
CASC4-201ENST00000299957 NTNG2Q96CW9 530 aa11.51□□□□□ -0.57
CASC4-201ENST00000299957 G6PCP35575 357 aa11.51□□□□□ -0.57
CASC4-201ENST00000299957 RND3P61587 244 aa11.51□□□□□ -0.57
CASC4-201ENST00000299957 GNG3P63215 75 aa11.51□□□□□ -0.57
CASC4-201ENST00000299957 SUPT4H1P63272 117 aaKnown RBP11.51□□□□□ -0.57
CASC4-201ENST00000299957 ZNF826PQ6ZT77 177 aa11.51□□□□□ -0.57
CASC4-201ENST00000299957 ZNF107Q9UII5 783 aaPredicted RBP11.51□□□□□ -0.57
CASC4-201ENST00000299957 MDFIC2A0A1B0GVS7 189 aa11.51□□□□□ -0.57
CASC4-201ENST00000299957 A0A1W2PPE3 182 aa11.51□□□□□ -0.57
CASC4-201ENST00000299957 SH2D1BO14796 132 aa11.51□□□□□ -0.57
CASC4-201ENST00000299957 AGFG2O95081 481 aa11.51□□□□□ -0.57
CASC4-201ENST00000299957 FFAR4Q5NUL3 377 aa11.51□□□□□ -0.57
CASC4-201ENST00000299957 MARS2Q96GW9 593 aaKnown RBP11.51□□□□□ -0.57
CASC4-201ENST00000299957 RTL8AQ9BWD3 113 aa11.51□□□□□ -0.57
CASC4-201ENST00000299957 PRDM6Q9NQX0 595 aa11.51□□□□□ -0.57
CASC4-201ENST00000299957 CLN8Q9UBY8 286 aa11.51□□□□□ -0.57
CASC4-201ENST00000299957 CACFD1Q9UGQ2 172 aa11.51□□□□□ -0.57
CASC4-201ENST00000299957 PROB1E7EW31 1015 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 E9PLN8 166 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 SYNGR2O43760 224 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 FCGR3BO75015 233 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 ZNF737O75373 536 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 CELA3AP09093 270 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 ADCYAP1P18509 176 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 CCL20P78556 96 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 ABHD5Q8WTS1 349 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 CRYM-AS1A6NIL9 109 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 CLDN34H7C241 214 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 TNFSF15O95150 251 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 CLPSP04118 112 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 CTXN2P0C2S0 81 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 RBM11P57052 281 aaKnown RBP11.5□□□□□ -0.57
CASC4-201ENST00000299957 ENDOGQ14249 297 aaKnown RBP11.5□□□□□ -0.57
CASC4-201ENST00000299957 FAM27BQ5VT28 67 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 POMT1Q9Y6A1 747 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 SPEGQ15772 3267 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 TOX4O94842 621 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 SURF2Q15527 256 aaPredicted RBP11.5□□□□□ -0.57
CASC4-201ENST00000299957 SSMEM1Q8WWF3 244 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 LYZL4Q96KX0 146 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 Q96M66 194 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 TCFL5Q9UL49 500 aa11.5□□□□□ -0.57
CASC4-201ENST00000299957 C9JQL5 133 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 IL2RAP01589 272 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 SRD5A2P31213 254 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 OR8B8Q15620 311 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 ZNF818PQ6ZRF7 136 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 ZNF251Q9BRH9 671 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 MTCH1Q9NZJ7 389 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 CUL9Q8IWT3 2517 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 MELTFP08582 738 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 SEC11BP0C7V7 166 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 AESQ08117 197 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 KCNIP4Q6PIL6 250 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 OR51I2Q9H344 312 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms