RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 SMAGPQ0VAQ4 97 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 PHOSPHO2Q8TCD6 241 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 GRAMD2BQ96HH9 432 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 TMEM30AQ9NV96 361 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 PATE4P0C8F1 98 aa13.08□□□□□ -0.31
SCN3B-201ENST00000299333 PLPPR5Q32ZL2 321 aa13.08□□□□□ -0.31
SCN3B-201ENST00000299333 ZNF766Q5HY98 468 aa13.08□□□□□ -0.31
SCN3B-201ENST00000299333 C10orf113Q5VZT2 155 aa13.08□□□□□ -0.31
SCN3B-201ENST00000299333 RSPO2Q6UXX9 243 aaPredicted RBP13.08□□□□□ -0.31
SCN3B-201ENST00000299333 LRRC29Q8WV35 223 aa13.08□□□□□ -0.31
SCN3B-201ENST00000299333 LINC00615Q96LM1 132 aaPredicted RBP13.08□□□□□ -0.31
SCN3B-201ENST00000299333 SLC25A17O43808 307 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 PPYP01298 95 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 TNFRSF1AP19438 455 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 PMCHL1Q16048 86 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 OR4X1Q8NH49 305 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 TREM2Q9NZC2 230 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 TINAGQ9UJW2 476 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 HTN1P15515 57 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 RUNX1Q01196 453 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 FOXQ1Q9C009 403 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 MTCH2Q9Y6C9 303 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 MGAT2Q10469 447 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 F11RQ9Y624 299 aaKnown RBP13.08□□□□□ -0.32
SCN3B-201ENST00000299333 IGLV3-27P01718 113 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 CEACAM5P06731 702 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 GLULP15104 373 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 HIST1H1BP16401 226 aaKnown RBP13.08□□□□□ -0.32
SCN3B-201ENST00000299333 COX7A1P24310 79 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 C21orf58P58505 322 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 PERPQ96FX8 193 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 SLC52A3Q9NQ40 469 aa13.08□□□□□ -0.32
SCN3B-201ENST00000299333 WDR25Q64LD2 544 aaPredicted RBP13.07□□□□□ -0.32
SCN3B-201ENST00000299333 MYOZ1Q9NP98 299 aaPredicted RBP13.07□□□□□ -0.32
SCN3B-201ENST00000299333 LOC105371267A0A1B0GV96 52 aa13.07□□□□□ -0.32
SCN3B-201ENST00000299333 NTN1O95631 604 aa13.07□□□□□ -0.32
SCN3B-201ENST00000299333 TMEM50BP56557 158 aa13.07□□□□□ -0.32
SCN3B-201ENST00000299333 C3orf80F5H4A9 247 aa13.07□□□□□ -0.32
SCN3B-201ENST00000299333 CDX1P47902 265 aaPredicted RBP13.07□□□□□ -0.32
SCN3B-201ENST00000299333 YBX1P67809 324 aaKnown RBP13.07□□□□□ -0.32
SCN3B-201ENST00000299333 TMEM95Q3KNT9 176 aa13.07□□□□□ -0.32
SCN3B-201ENST00000299333 OR8B3Q8NGG8 313 aa13.07□□□□□ -0.32
SCN3B-201ENST00000299333 OR2V2Q96R30 315 aa13.07□□□□□ -0.32
SCN3B-201ENST00000299333 THYN1Q9P016 225 aa13.07□□□□□ -0.32
SCN3B-201ENST00000299333 CACNA1CQ13936 2221 aa13.07□□□□□ -0.32
SCN3B-201ENST00000299333 A0A1B0GW15 77 aa13.07□□□□□ -0.32
SCN3B-201ENST00000299333 FAM157AC9JC47 383 aa13.07□□□□□ -0.32
SCN3B-201ENST00000299333 PITX3O75364 302 aa13.07□□□□□ -0.32
SCN3B-201ENST00000299333 MOSPD3O75425 235 aa13.07□□□□□ -0.32
SCN3B-201ENST00000299333 ZNF324O75467 553 aaPredicted RBP13.07□□□□□ -0.32
SCN3B-201ENST00000299333 MPLP40238 635 aa13.07□□□□□ -0.32
SCN3B-201ENST00000299333 H1FOOQ8IZA3 346 aaPredicted RBP13.07□□□□□ -0.32
SCN3B-201ENST00000299333 KCNE1BA0A087WTH5 132 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 PLPP3O14495 311 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 BTF3P20290 206 aaKnown RBP13.06□□□□□ -0.32
SCN3B-201ENST00000299333 ZNF660Q6AZW8 331 aaPredicted RBP13.06□□□□□ -0.32
SCN3B-201ENST00000299333 FGF14Q92915 247 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 ZDHHC16Q969W1 377 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 SNRNP40Q96DI7 357 aaKnown RBP13.06□□□□□ -0.32
SCN3B-201ENST00000299333 C7orf66A4D0T2 115 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 PRSS23O95084 383 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 RBPMS2Q6ZRY4 209 aaKnown RBP13.06□□□□□ -0.32
SCN3B-201ENST00000299333 PRF1P14222 555 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 EFNB2P52799 333 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 HFEQ30201 348 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 GNRHR2Q96P88 292 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 PPIL1Q9Y3C6 166 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 TRAV8-7A0A075B6U6 113 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 VSIG10L2P0DP72 767 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 ERASQ7Z444 233 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 SOSTQ9BQB4 213 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 GHITMQ9H3K2 345 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 OR5AC2Q9NZP5 309 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 HBZP02008 142 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 MRPS11P82912 194 aaKnown RBP13.06□□□□□ -0.32
SCN3B-201ENST00000299333 PRNTQ86SH4 94 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 ATOH7Q8N100 152 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 GBGT1Q8N5D6 347 aa13.06□□□□□ -0.32
SCN3B-201ENST00000299333 C1QL1O75973 258 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 IFITM2Q01629 132 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 ACER2Q5QJU3 275 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 OR8I2Q8N0Y5 310 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 TLNRD1Q9H1K6 362 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 PQLC2LA1A4F0 135 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 NDUFB4O95168 129 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 OR10S1Q8NGN2 331 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 PTX4Q96A99 478 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 SMDT1Q9H4I9 107 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 MMP17Q9ULZ9 603 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 SMIM13P0DJ93 91 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 TWIST1Q15672 202 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 OR11G2Q8NGC1 345 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 TMEM38BQ9NVV0 291 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 PSG2P11465 335 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 PMELP40967 661 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 ZNF83P51522 516 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 FZD5Q13467 585 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 TMEM91Q6ZNR0 172 aa13.05□□□□□ -0.32
SCN3B-201ENST00000299333 ZNF107Q9UII5 783 aaPredicted RBP13.05□□□□□ -0.32
SCN3B-201ENST00000299333 CFDP00746 253 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms