RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 A0A0G2JMZ2 1700 aa15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 LRRC37A2A6NM11 1700 aa15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 ZFP36L1Q07352 338 aaKnown RBP15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 C4orf17Q53FE4 359 aa15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 ZNF788Q6ZQV5 615 aa15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 OR1L4Q8NGR5 311 aa15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 ST8SIA2Q92186 375 aa15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 SMIM7Q9BQ49 75 aa15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 ARID1AO14497 2285 aa15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 CSRP3P50461 194 aa15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 ZNF90Q03938 601 aa15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 ZNF260Q3ZCT1 412 aa15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 CBY1Q9Y3M2 126 aa15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 GNG7O60262 68 aa15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 VDAC1P21796 283 aa15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 BCL2L2Q92843 193 aaPredicted RBP15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 FAM103A1Q9BTL3 118 aaKnown RBP15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 OR1A1Q9P1Q5 309 aa15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 C9orf172C9J069 976 aa15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 KIR3DL2P43630 455 aa15.37■□□□□ 0.05
CDC42EP3-201ENST00000295324 CLDN14O95500 239 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 DAOP14920 347 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 GZMKP49863 264 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 NAAAQ02083 359 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 PTX4Q96A99 478 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 ZNF488Q96MN9 340 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 ST6GALNAC2Q9UJ37 374 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 ZMIZ1Q9ULJ6 1067 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 CACNA1IQ9P0X4 2223 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 IGLV3-12A0A075B6K2 115 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 NTF3P20783 257 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 IRF3Q14653 427 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 GAPTQ8N292 157 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 OR2C3Q8N628 320 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 CCL28Q9NRJ3 127 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 SERTM2A0A1B0GWG4 89 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 NPIPB13A6NJU9 1138 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 NPIPB4C9JG80 1138 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 GSTZ1O43708 216 aaPredicted RBP15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 SMPD2O60906 423 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 RFPL3SP0C7P2 107 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 FFAR4Q5NUL3 377 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 PRR27Q6MZM9 219 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 FAM57AQ8TBR7 257 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 CXorf58Q96LI9 332 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 B9A039 149 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 K7N7A8 449 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 SYNGR1O43759 233 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 GCM2O75603 506 aaPredicted RBP15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 CST4P01036 141 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 FGF12P61328 243 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 RHOBP62745 196 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 PLAC9Q5JTB6 97 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 RXFP4Q8TDU9 374 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 LINC00470Q9BZP3 86 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 J3QW42 95 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 DCTN6O00399 190 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 TIMM23BQ5SRD1 257 aa15.36■□□□□ 0.05
CDC42EP3-201ENST00000295324 TRAV39A0A0B4J263 110 aa15.35■□□□□ 0.05
CDC42EP3-201ENST00000295324 NECAP1Q8NC96 275 aa15.35■□□□□ 0.05
CDC42EP3-201ENST00000295324 OR5C1Q8NGR4 320 aa15.35■□□□□ 0.05
CDC42EP3-201ENST00000295324 ZNRF4Q8WWF5 429 aa15.35■□□□□ 0.05
CDC42EP3-201ENST00000295324 PDLIM4P50479 330 aa15.35■□□□□ 0.05
CDC42EP3-201ENST00000295324 SPINK9Q5DT21 86 aa15.35■□□□□ 0.05
CDC42EP3-201ENST00000295324 GCSAMQ8N6F7 178 aa15.35■□□□□ 0.05
CDC42EP3-201ENST00000295324 NANOS3P60323 173 aaKnown RBP15.35■□□□□ 0.05
CDC42EP3-201ENST00000295324 KCNMB1Q16558 191 aa15.35■□□□□ 0.05
CDC42EP3-201ENST00000295324 TRBV23-1A0A0A0MS06 115 aa15.35■□□□□ 0.05
CDC42EP3-201ENST00000295324 TRIM77I1YAP6 450 aa15.35■□□□□ 0.05
CDC42EP3-201ENST00000295324 S100A8P05109 93 aa15.35■□□□□ 0.05
CDC42EP3-201ENST00000295324 RAB32Q13637 225 aa15.35■□□□□ 0.05
CDC42EP3-201ENST00000295324 MUC15Q8N387 334 aa15.35■□□□□ 0.05
CDC42EP3-201ENST00000295324 SNX22Q96L94 193 aa15.35■□□□□ 0.05
CDC42EP3-201ENST00000295324 PRDM14Q9GZV8 571 aa15.35■□□□□ 0.05
CDC42EP3-201ENST00000295324 ARL2-SNX15V9GYD0 113 aa15.35■□□□□ 0.05
CDC42EP3-201ENST00000295324 RAB29O14966 203 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 ARG1P05089 322 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 MPV17P39210 176 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 SIGLECL1Q8N7X8 197 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 ZNF586Q9NXT0 402 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 SYNGR2O43760 224 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 FSTP19883 344 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 GTF2H5Q6ZYL4 71 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 KLF14Q8TD94 323 aaPredicted RBP15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 TMEM45BQ96B21 275 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 Q9N2K0 584 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 CLCF1Q9UBD9 225 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 DBX1A6NMT0 343 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 GAPDHP04406 335 aaKnown RBP15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 PKIBQ9C010 78 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 TMPRSS5Q9H3S3 457 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 GAR1Q9NY12 217 aaKnown RBP15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 MIOXQ9UGB7 285 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 LYZP61626 148 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 VAMP3Q15836 100 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 LINC01560Q8TB33 94 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 CCL19Q99731 98 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 LHFPL6Q9Y693 200 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 IGKV1D-42A0A075B6H8 117 aa15.34■□□□□ 0.05
CDC42EP3-201ENST00000295324 RPS4XP62701 263 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms