RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 CEBPDP49716 269 aaPredicted RBP13.46□□□□□ -0.26
NCKIPSD-201ENST00000294129 FAM76BQ5HYJ3 339 aa13.46□□□□□ -0.26
NCKIPSD-201ENST00000294129 TMEM182Q6ZP80 229 aaPredicted RBP13.46□□□□□ -0.26
NCKIPSD-201ENST00000294129 RNASE11Q8TAA1 199 aaKnown RBP13.46□□□□□ -0.26
NCKIPSD-201ENST00000294129 AKR1E2Q96JD6 320 aa13.46□□□□□ -0.26
NCKIPSD-201ENST00000294129 CDH20Q9HBT6 801 aa13.46□□□□□ -0.26
NCKIPSD-201ENST00000294129 DLL3Q9NYJ7 618 aa13.46□□□□□ -0.26
NCKIPSD-201ENST00000294129 HSPA12AO43301 675 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 SS18L1O75177 396 aaPredicted RBP13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 GAPDHP04406 335 aaKnown RBP13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 ETV3LQ6ZN32 361 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 SAXO1Q8IYX7 474 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 CMTM1Q8IZ96 169 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 SELENOHQ8IZQ5 122 aaKnown RBP13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 Q8NFD4 153 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 OR10J5Q8NHC4 309 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 BCL2L14Q9BZR8 327 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 FAM212BQ9NTI7 297 aaPredicted RBP13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 PTPRZ1P23471 2315 aaPredicted RBP13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 FAM90A10PA6NDY2 464 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 FAM90A18PA6NE21 464 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 FAM90A16PA6NEW6 464 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 FAM90A20PA6NIJ5 464 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 FAM90A8PA6NJQ4 464 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 FAM90A7PA6NKC0 464 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 FAM90A22PA8MWA6 464 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 FAM90A12PA8MX19 464 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 FAM90A5PA8MXJ8 464 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 FAM90A23PA8MXZ1 464 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 FAM90A15PP0C7V4 464 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 FAM90A13PP0C7W8 464 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 FAM90A14PP0C7W9 464 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 FAM90A24PP0C7X0 464 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 SPP1P10451 314 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 KCNJ3P48549 501 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 HOXA1P49639 335 aaPredicted RBP13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 EWSR1Q01844 656 aaKnown RBP eCLIP13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 DHRS7BQ6IAN0 325 aaPredicted RBP13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 WDR86Q86TI4 376 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 UBAC2Q8NBM4 344 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 OR4D5Q8NGN0 318 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 LILRB1Q8NHL6 650 aaPredicted RBP13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 MPC1Q9Y5U8 109 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 POMT1Q9Y6A1 747 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 USF3Q68DE3 2245 aa13.45□□□□□ -0.26
NCKIPSD-201ENST00000294129 OR5B21A6NL26 309 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 SNAPINO95295 136 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 IGHV1-2P23083 117 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 TNFSF10P50591 281 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 F2RL1P55085 397 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 PPP1CBP62140 327 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 VAMP2P63027 116 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 RNF122Q9H9V4 155 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 KCNS2Q9ULS6 477 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 PPP1R3CQ9UQK1 317 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 TFF1P04155 84 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 CRYBA1P05813 215 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 P2RY1P47900 373 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 CTAG1AP78358 180 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 IL13RA2Q14627 380 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 BTNL8Q6UX41 500 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 OR2C3Q8N628 320 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 FAM213BQ8TBF2 198 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 SLC25A40Q8TBP6 338 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 EIF5A2Q9GZV4 153 aaKnown RBP13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 OR51I2Q9H344 312 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 PLSCR2Q9NRY7 297 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 CARHSP1Q9Y2V2 147 aaKnown RBP13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 IGSF23A1L1A6 192 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 H0YL77 283 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 WRBO00258 174 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 NXPH2O95156 264 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 OR1J1Q8NGS3 322 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 TRAPPC2LQ9UL33 140 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 DOCK11Q5JSL3 2073 aa13.44□□□□□ -0.26
NCKIPSD-201ENST00000294129 PROB1E7EW31 1015 aa13.43□□□□□ -0.26
NCKIPSD-201ENST00000294129 WT1P19544 449 aaPredicted RBP13.43□□□□□ -0.26
NCKIPSD-201ENST00000294129 C10orf91Q5T1B1 145 aa13.43□□□□□ -0.26
NCKIPSD-201ENST00000294129 PCSK4Q6UW60 755 aa13.43□□□□□ -0.26
NCKIPSD-201ENST00000294129 SCCPDHQ8NBX0 429 aa13.43□□□□□ -0.26
NCKIPSD-201ENST00000294129 RXFP4Q8TDU9 374 aa13.43□□□□□ -0.26
NCKIPSD-201ENST00000294129 BOD1Q96IK1 185 aa13.43□□□□□ -0.26
NCKIPSD-201ENST00000294129 SMPD2O60906 423 aa13.43□□□□□ -0.26
NCKIPSD-201ENST00000294129 PGLYRP1O75594 196 aaPredicted RBP13.43□□□□□ -0.26
NCKIPSD-201ENST00000294129 CNOT4O95628 575 aaKnown RBP13.43□□□□□ -0.26
NCKIPSD-201ENST00000294129 C20orf24Q9BUV8 137 aa13.43□□□□□ -0.26
NCKIPSD-201ENST00000294129 SPACA1Q9HBV2 294 aa13.43□□□□□ -0.26
NCKIPSD-201ENST00000294129 PARP11Q9NR21 331 aa13.43□□□□□ -0.26
NCKIPSD-201ENST00000294129 TINAGQ9UJW2 476 aa13.43□□□□□ -0.26
NCKIPSD-201ENST00000294129 PSG2P11465 335 aa13.42□□□□□ -0.26
NCKIPSD-201ENST00000294129 PMELP40967 661 aa13.42□□□□□ -0.26
NCKIPSD-201ENST00000294129 GPR157Q5UAW9 335 aa13.42□□□□□ -0.26
NCKIPSD-201ENST00000294129 ZNF826PQ6ZT77 177 aa13.42□□□□□ -0.26
NCKIPSD-201ENST00000294129 FAM185AQ8N0U4 392 aa13.42□□□□□ -0.26
NCKIPSD-201ENST00000294129 PLPPR1Q8TBJ4 325 aa13.42□□□□□ -0.26
NCKIPSD-201ENST00000294129 RTL8AQ9BWD3 113 aa13.42□□□□□ -0.26
NCKIPSD-201ENST00000294129 SEC11CQ9BY50 192 aa13.42□□□□□ -0.26
NCKIPSD-201ENST00000294129 OPA3Q9H6K4 179 aa13.42□□□□□ -0.26
NCKIPSD-201ENST00000294129 OBP2BQ9NPH6 170 aa13.42□□□□□ -0.26
NCKIPSD-201ENST00000294129 BIN3Q9NQY0 253 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms