RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 A0A1W2PRM7 423 aa21.89■■□□□ 1.09
SSU72-201ENST00000291386 GDNFP39905 211 aa21.89■■□□□ 1.09
SSU72-201ENST00000291386 VEGFCP49767 419 aa21.89■■□□□ 1.09
SSU72-201ENST00000291386 SLC16A12Q6ZSM3 486 aa21.89■■□□□ 1.09
SSU72-201ENST00000291386 RTN4RL2Q86UN3 420 aa21.89■■□□□ 1.09
SSU72-201ENST00000291386 ZDHHC22Q8N966 263 aa21.89■■□□□ 1.09
SSU72-201ENST00000291386 KIRREL1Q96J84 757 aa21.89■■□□□ 1.09
SSU72-201ENST00000291386 CYYR1Q96J86 154 aa21.89■■□□□ 1.09
SSU72-201ENST00000291386 MBNL3Q9NUK0 354 aaKnown RBP21.89■■□□□ 1.09
SSU72-201ENST00000291386 IDI2-AS1Q9NZ38 188 aa21.89■■□□□ 1.09
SSU72-201ENST00000291386 IGHV2-26A0A0B4J1V2 119 aa21.88■■□□□ 1.09
SSU72-201ENST00000291386 MDFIC2A0A1B0GVS7 189 aa21.88■■□□□ 1.09
SSU72-201ENST00000291386 MEIOCA2RUB1 952 aa21.88■■□□□ 1.09
SSU72-201ENST00000291386 C15orf65H3BRN8 121 aa21.88■■□□□ 1.09
SSU72-201ENST00000291386 OMGP23515 440 aa21.88■■□□□ 1.09
SSU72-201ENST00000291386 RPS19P39019 145 aaKnown RBP21.88■■□□□ 1.09
SSU72-201ENST00000291386 TRAT1Q6PIZ9 186 aa21.88■■□□□ 1.09
SSU72-201ENST00000291386 Q6ZTK2 550 aa21.88■■□□□ 1.09
SSU72-201ENST00000291386 GPR141Q7Z602 305 aa21.88■■□□□ 1.09
SSU72-201ENST00000291386 ZNF554Q86TJ5 538 aa21.88■■□□□ 1.09
SSU72-201ENST00000291386 LDLRAD3Q86YD5 345 aa21.88■■□□□ 1.09
SSU72-201ENST00000291386 MRPL30Q8TCC3 161 aaKnown RBP21.88■■□□□ 1.09
SSU72-201ENST00000291386 CCDC107Q8WV48 283 aa21.88■■□□□ 1.09
SSU72-201ENST00000291386 ZFAND2BQ8WV99 257 aa21.88■■□□□ 1.09
SSU72-201ENST00000291386 AJUBAQ96IF1 538 aa21.88■■□□□ 1.09
SSU72-201ENST00000291386 CLEC7AQ9BXN2 247 aa21.88■■□□□ 1.09
SSU72-201ENST00000291386 ESM1Q9NQ30 184 aa21.88■■□□□ 1.09
SSU72-201ENST00000291386 TRAPPC2LQ9UL33 140 aa21.88■■□□□ 1.09
SSU72-201ENST00000291386 TBL2Q9Y4P3 447 aaKnown RBP21.88■■□□□ 1.09
SSU72-201ENST00000291386 TRAV39A0A0B4J263 110 aa21.87■■□□□ 1.09
SSU72-201ENST00000291386 METTL21EPA6NDL7 271 aa21.87■■□□□ 1.09
SSU72-201ENST00000291386 CLDN34H7C241 214 aa21.87■■□□□ 1.09
SSU72-201ENST00000291386 GABARAPO95166 117 aa21.87■■□□□ 1.09
SSU72-201ENST00000291386 FBP1P09467 338 aa21.87■■□□□ 1.09
SSU72-201ENST00000291386 SSTR5P35346 364 aa21.87■■□□□ 1.09
SSU72-201ENST00000291386 C6orf183Q5T699 404 aa21.87■■□□□ 1.09
SSU72-201ENST00000291386 OR4K15Q8NH41 348 aa21.87■■□□□ 1.09
SSU72-201ENST00000291386 ZDHHC16Q969W1 377 aa21.87■■□□□ 1.09
SSU72-201ENST00000291386 RIMS4Q9H426 269 aaPredicted RBP21.87■■□□□ 1.09
SSU72-201ENST00000291386 ZMAT3Q9HA38 289 aaKnown RBP21.87■■□□□ 1.09
SSU72-201ENST00000291386 FAM96BQ9Y3D0 163 aa21.87■■□□□ 1.09
SSU72-201ENST00000291386 RAB27BO00194 218 aa21.86■■□□□ 1.09
SSU72-201ENST00000291386 NAPSAO96009 420 aa21.86■■□□□ 1.09
SSU72-201ENST00000291386 NCS1P62166 190 aa21.86■■□□□ 1.09
SSU72-201ENST00000291386 BAMBIQ13145 260 aa21.86■■□□□ 1.09
SSU72-201ENST00000291386 PLAC9Q5JTB6 97 aa21.86■■□□□ 1.09
SSU72-201ENST00000291386 ABHD12Q8N2K0 398 aa21.86■■□□□ 1.09
SSU72-201ENST00000291386 OR10R2Q8NGX6 335 aa21.86■■□□□ 1.09
SSU72-201ENST00000291386 ARHGAP5-AS1Q96IT6 56 aa21.86■■□□□ 1.09
SSU72-201ENST00000291386 PECRQ9BY49 303 aa21.86■■□□□ 1.09
SSU72-201ENST00000291386 RAB9BQ9NP90 201 aa21.86■■□□□ 1.09
SSU72-201ENST00000291386 ATRQ13535 2644 aa21.86■■□□□ 1.09
SSU72-201ENST00000291386 TRBV6-6A0A0A6YYG2 114 aa21.85■■□□□ 1.09
SSU72-201ENST00000291386 POM121CA8CG34 1229 aa21.85■■□□□ 1.09
SSU72-201ENST00000291386 ARG1P05089 322 aa21.85■■□□□ 1.09
SSU72-201ENST00000291386 MELTFP08582 738 aa21.85■■□□□ 1.09
SSU72-201ENST00000291386 SNRPBP14678 240 aaKnown RBP21.85■■□□□ 1.09
SSU72-201ENST00000291386 RPL5P46777 297 aaKnown RBP21.85■■□□□ 1.09
SSU72-201ENST00000291386 LGALS4P56470 323 aa21.85■■□□□ 1.09
SSU72-201ENST00000291386 VBP1P61758 197 aa21.85■■□□□ 1.09
SSU72-201ENST00000291386 CTF1Q16619 201 aa21.85■■□□□ 1.09
SSU72-201ENST00000291386 IDNKQ5T6J7 187 aa21.85■■□□□ 1.09
SSU72-201ENST00000291386 BAIAP2L2Q6UXY1 529 aa21.85■■□□□ 1.09
SSU72-201ENST00000291386 TMEM86BQ8N661 226 aa21.85■■□□□ 1.09
SSU72-201ENST00000291386 OR52M1Q8NGK5 317 aa21.85■■□□□ 1.09
SSU72-201ENST00000291386 LGALS14Q8TCE9 139 aa21.85■■□□□ 1.09
SSU72-201ENST00000291386 ARL11Q969Q4 196 aa21.85■■□□□ 1.09
SSU72-201ENST00000291386 MEGF9Q9H1U4 602 aa21.85■■□□□ 1.09
SSU72-201ENST00000291386 ABRACLQ9P1F3 81 aa21.85■■□□□ 1.09
SSU72-201ENST00000291386 ZNRD1Q9P1U0 126 aa21.85■■□□□ 1.09
SSU72-201ENST00000291386 ETV7Q9Y603 341 aa21.85■■□□□ 1.09
SSU72-201ENST00000291386 DNAJC9-AS1A6NH13 148 aa21.84■■□□□ 1.09
SSU72-201ENST00000291386 C12orf77C9JDV5 145 aa21.84■■□□□ 1.09
SSU72-201ENST00000291386 TRIM77I1YAP6 450 aa21.84■■□□□ 1.09
SSU72-201ENST00000291386 F2RL2O00254 374 aa21.84■■□□□ 1.09
SSU72-201ENST00000291386 PAHP00439 452 aa21.84■■□□□ 1.09
SSU72-201ENST00000291386 TMEM30BQ3MIR4 351 aa21.84■■□□□ 1.09
SSU72-201ENST00000291386 MOGAT2Q3SYC2 334 aa21.84■■□□□ 1.09
SSU72-201ENST00000291386 MINOS1Q5TGZ0 78 aa21.84■■□□□ 1.09
SSU72-201ENST00000291386 GPR107Q5VW38 600 aa21.84■■□□□ 1.09
SSU72-201ENST00000291386 ZNF880Q6PDB4 577 aa21.84■■□□□ 1.09
SSU72-201ENST00000291386 BEND2Q8NDZ0 799 aa21.84■■□□□ 1.09
SSU72-201ENST00000291386 RFESDQ8TAC1 157 aa21.84■■□□□ 1.09
SSU72-201ENST00000291386 RAB3CQ96E17 227 aa21.84■■□□□ 1.09
SSU72-201ENST00000291386 NAA50Q9GZZ1 169 aaKnown RBP21.84■■□□□ 1.09
SSU72-201ENST00000291386 ZNF286AQ9HBT8 521 aa21.84■■□□□ 1.09
SSU72-201ENST00000291386 AK3Q9UIJ7 227 aa21.84■■□□□ 1.09
SSU72-201ENST00000291386 MINOS1-NBL1R4GNA1 71 aa21.84■■□□□ 1.09
SSU72-201ENST00000291386 IGLV1-47P01700 117 aa21.83■■□□□ 1.09
SSU72-201ENST00000291386 RCC1P18754 421 aaPredicted RBP21.83■■□□□ 1.09
SSU72-201ENST00000291386 SERPINB10P48595 397 aa21.83■■□□□ 1.09
SSU72-201ENST00000291386 UBA52P62987 128 aaKnown RBP21.83■■□□□ 1.09
SSU72-201ENST00000291386 SLC9A3R2Q15599 337 aa21.83■■□□□ 1.09
SSU72-201ENST00000291386 ZNF596Q8TC21 504 aa21.83■■□□□ 1.09
SSU72-201ENST00000291386 C17orf50Q8WW18 174 aa21.83■■□□□ 1.09
SSU72-201ENST00000291386 SLC25A46Q96AG3 418 aa21.83■■□□□ 1.09
SSU72-201ENST00000291386 SPATA2Q9UM82 520 aa21.83■■□□□ 1.09
SSU72-201ENST00000291386 POMT1Q9Y6A1 747 aa21.83■■□□□ 1.09
SSU72-201ENST00000291386 HOXA3O43365 443 aaPredicted RBP21.82■■□□□ 1.08
SSU72-201ENST00000291386 SCGNO76038 276 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms