RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 LPAR2Q9HBW0 351 aa17.97■□□□□ 0.47
PDLIM3-203ENST00000284771 FLNAP21333 2647 aaKnown RBP17.97■□□□□ 0.47
PDLIM3-203ENST00000284771 LOC105371242A0A075B767 164 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 FUOMA2VDF0 154 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 CCL3L1P16619 93 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 SSTR5P35346 364 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 C17orf58Q2M2W7 97 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 HOGA1Q86XE5 327 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 C11orf42Q8N5U0 333 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 ZNF565Q8N9K5 539 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 UBALD1Q8TB05 177 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 C1orf159Q96HA4 380 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 WDR12Q9GZL7 423 aaKnown RBP17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 POLR3KQ9Y2Y1 108 aaPredicted RBP17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 LINC00312Q9Y6C7 94 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 TRBV23-1A0A0A0MS06 115 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 hADV38S2A0JD32 116 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 C12orf77C9JDV5 145 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 C15orf65H3BRN8 121 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 RBBP9O75884 186 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 ECDO95905 644 aaPredicted RBP17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 SCTP09683 121 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 CD40LGP29965 261 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 GLP1RP43220 463 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 FAM185AQ8N0U4 392 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 OR6C3Q9NZP0 311 aa17.96■□□□□ 0.47
PDLIM3-203ENST00000284771 TEX15Q9BXT5 2789 aa17.95■□□□□ 0.46
PDLIM3-203ENST00000284771 PPIAL4CA0A0B4J2A2 164 aa17.95■□□□□ 0.46
PDLIM3-203ENST00000284771 POM121CA8CG34 1229 aa17.95■□□□□ 0.46
PDLIM3-203ENST00000284771 PPIAL4GP0DN37 164 aa17.95■□□□□ 0.46
PDLIM3-203ENST00000284771 NAT1P18440 290 aa17.95■□□□□ 0.46
PDLIM3-203ENST00000284771 DLX6P56179 175 aa17.95■□□□□ 0.46
PDLIM3-203ENST00000284771 SRSF7Q16629 238 aaKnown RBP eCLIP17.95■□□□□ 0.46
PDLIM3-203ENST00000284771 C11orf91Q3C1V1 193 aa17.95■□□□□ 0.46
PDLIM3-203ENST00000284771 Q6ZS49 121 aa17.95■□□□□ 0.46
PDLIM3-203ENST00000284771 BEST4Q8NFU0 473 aa17.95■□□□□ 0.46
PDLIM3-203ENST00000284771 TAF9BQ9HBM6 251 aa17.95■□□□□ 0.46
PDLIM3-203ENST00000284771 TRGV10A0A0A0MS01 117 aa17.94■□□□□ 0.46
PDLIM3-203ENST00000284771 FOXH1O75593 365 aa17.94■□□□□ 0.46
PDLIM3-203ENST00000284771 HEXAP06865 529 aa17.94■□□□□ 0.46
PDLIM3-203ENST00000284771 GSTT2P0CG29 244 aa17.94■□□□□ 0.46
PDLIM3-203ENST00000284771 GSTT2BP0CG30 244 aa17.94■□□□□ 0.46
PDLIM3-203ENST00000284771 GDNFP39905 211 aa17.94■□□□□ 0.46
PDLIM3-203ENST00000284771 CBX5P45973 191 aa17.94■□□□□ 0.46
PDLIM3-203ENST00000284771 CD276Q5ZPR3 534 aa17.94■□□□□ 0.46
PDLIM3-203ENST00000284771 RFESDQ8TAC1 157 aa17.94■□□□□ 0.46
PDLIM3-203ENST00000284771 ACANP16112 2415 aa17.94■□□□□ 0.46
PDLIM3-203ENST00000284771 ABCA1O95477 2261 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 IGKV1-6A0A0C4DH72 117 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 A0A1W2PQ09 198 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 MMP23AO75900 390 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 GZMHP20718 246 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 OMGP23515 440 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 IFITM3Q01628 133 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 HERPUD1Q15011 391 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 HMGN3Q15651 99 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 PRR18Q8N4B5 295 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 IFT46Q9NQC8 304 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 ANXA10Q9UJ72 324 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 UBE2J1Q9Y385 318 aaPredicted RBP17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 KBTBD11-OT1A0A1B0GTJ5 212 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 TRDCB7Z8K6 153 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 IL7P13232 177 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 HLA-DMAP28067 261 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 TMEM249Q2WGJ8 235 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 UTF1Q5T230 341 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 FAM53AQ6NSI3 398 aaPredicted RBP17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 OR1L1Q8NH94 360 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 ARL11Q969Q4 196 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 CALYQ9NYX4 217 aa17.93■□□□□ 0.46
PDLIM3-203ENST00000284771 CSPG4Q6UVK1 2322 aa17.92■□□□□ 0.46
PDLIM3-203ENST00000284771 KIR2DS1A0A191URI9 304 aa17.92■□□□□ 0.46
PDLIM3-203ENST00000284771 NPIPB11E5RHQ5 1161 aa17.92■□□□□ 0.46
PDLIM3-203ENST00000284771 ZNF728P0DKX0 622 aa17.92■□□□□ 0.46
PDLIM3-203ENST00000284771 HLA-DRB3P79483 266 aa17.92■□□□□ 0.46
PDLIM3-203ENST00000284771 IGSF11Q5DX21 431 aa17.92■□□□□ 0.46
PDLIM3-203ENST00000284771 MOB1BQ7L9L4 216 aa17.92■□□□□ 0.46
PDLIM3-203ENST00000284771 MSI2Q96DH6 328 aaKnown RBP17.92■□□□□ 0.46
PDLIM3-203ENST00000284771 KIRREL1Q96J84 757 aa17.92■□□□□ 0.46
PDLIM3-203ENST00000284771 ZNF714Q96N38 554 aa17.92■□□□□ 0.46
PDLIM3-203ENST00000284771 CCDC32Q9BV29 185 aa17.92■□□□□ 0.46
PDLIM3-203ENST00000284771 LINC00574Q9H8X3 128 aa17.92■□□□□ 0.46
PDLIM3-203ENST00000284771 ZNF286AQ9HBT8 521 aa17.92■□□□□ 0.46
PDLIM3-203ENST00000284771 TAS2R3Q9NYW6 316 aa17.92■□□□□ 0.46
PDLIM3-203ENST00000284771 LPAR3Q9UBY5 353 aa17.92■□□□□ 0.46
PDLIM3-203ENST00000284771 IGHV2-70DA0A0C4DH43 119 aa17.91■□□□□ 0.46
PDLIM3-203ENST00000284771 B4DSR2 109 aa17.91■□□□□ 0.46
PDLIM3-203ENST00000284771 FABP7O15540 132 aa17.91■□□□□ 0.46
PDLIM3-203ENST00000284771 HBZP02008 142 aa17.91■□□□□ 0.46
PDLIM3-203ENST00000284771 LIPFP07098 398 aa17.91■□□□□ 0.46
PDLIM3-203ENST00000284771 RCVRNP35243 200 aa17.91■□□□□ 0.46
PDLIM3-203ENST00000284771 ACTBP60709 375 aa17.91■□□□□ 0.46
PDLIM3-203ENST00000284771 ACTG1P63261 375 aa17.91■□□□□ 0.46
PDLIM3-203ENST00000284771 SSBP1Q04837 148 aaKnown RBP17.91■□□□□ 0.46
PDLIM3-203ENST00000284771 C6orf183Q5T699 404 aa17.91■□□□□ 0.46
PDLIM3-203ENST00000284771 ANKRD20A5PA0PJZ0 165 aa17.9■□□□□ 0.46
PDLIM3-203ENST00000284771 ZNF729A6NN14 1252 aaPredicted RBP17.9■□□□□ 0.46
PDLIM3-203ENST00000284771 CD3DP04234 171 aa17.9■□□□□ 0.46
PDLIM3-203ENST00000284771 MSMBP08118 114 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms