RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 OPA3Q9H6K4 179 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 WSB1Q9Y6I7 421 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 H0YL77 283 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 PHOX2AO14813 284 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 SYNGR1O43759 233 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 MMP9P14780 707 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 OTX1P32242 354 aaPredicted RBP11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 HES3Q5TGS1 186 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 MRPL14Q6P1L8 145 aaKnown RBP11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 CLDN23Q96B33 292 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 HSF4Q9ULV5 492 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 NCKAP5O14513 1909 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 SPAARA0A1B0GVQ0 90 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 KLRC4-KLRK1H3BQV0 150 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 CDIPTO14735 213 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 GPR137BO60478 399 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 CD63P08962 238 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 CEBPDP49716 269 aaPredicted RBP11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 S100A12P80511 92 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 TGFBR3Q03167 851 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 ZNF528Q3MIS6 628 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 ZNF429Q86V71 674 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 WDR5BQ86VZ2 330 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 SLC35B3Q9H1N7 401 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 DEPPQ9NTK1 212 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 SLC39A9Q9NUM3 307 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 FOXJ2Q9P0K8 574 aa11.88□□□□□ -0.51
LPCAT1-201ENST00000283415 LOC102723996A0A087X1L8 192 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 MFNGO00587 321 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 PDCD6O75340 191 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 RAB5AP20339 215 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 HOXA1P49639 335 aaPredicted RBP11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 GTF3C1Q12789 2109 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 GAPTQ8N292 157 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 PROK2Q9HC23 129 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 CYTL1Q9NRR1 136 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 DECR2Q9NUI1 292 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 GNG12Q9UBI6 72 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 PRSS50Q9UI38 385 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 WASF3Q9UPY6 502 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 TIMM8BQ9Y5J9 83 aaPredicted RBP11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 PINLYPA6NC86 204 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 LINC00587B1AMM8 73 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 KLF7O75840 302 aaPredicted RBP11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 SERPINA7P05543 415 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 NAT2P11245 290 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 RAB5CP51148 216 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 DYNLT3P51808 116 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 SPSB1Q96BD6 273 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 SSX3Q99909 188 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 C3orf85A0A1B0GTC6 90 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 CHST1O43916 411 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 MT-ND4LP03901 98 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 TFF1P04155 84 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 ATP6V0CP27449 155 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 DEFB109BQ30KR1 87 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 DEFB124Q8NES8 71 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 V9GYS6 101 aa11.87□□□□□ -0.51
LPCAT1-201ENST00000283415 MT-CO3P00414 261 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 RAC2P15153 192 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 GCH1P30793 250 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 SUPT4H1P63272 117 aaKnown RBP11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 FAM209BQ5JX69 171 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 C10orf128Q5T292 105 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 FAM27BQ5VT28 67 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 TBC1D26Q86UD7 250 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 TMEM54Q969K7 222 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 NABP1Q96AH0 204 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 SAT2Q96F10 170 aaPredicted RBP11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 TOLLIPQ9H0E2 274 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 TINAGQ9UJW2 476 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 SLC22A20A6NK97 555 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 TAAR9Q96RI9 348 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 ANGPTL4Q9BY76 406 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 MSL2Q9HCI7 577 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 MUC6Q6W4X9 2439 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.86□□□□□ -0.518e-7■■■■□ 21.1
LPCAT1-201ENST00000283415 A0A1W2PPQ1 181 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 PRF1P14222 555 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 FKBP2P26885 142 aaKnown RBP11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 RTL6Q6ICC9 239 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 PPP1R32Q7Z5V6 425 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 KCNE4Q8WWG9 221 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 PRO3102Q9H379 93 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 ZNF705FA8MVS1 300 aaPredicted RBP11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 C9JQL5 133 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 FCGR3AP08637 254 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 ZNF705DP0CH99 300 aaPredicted RBP11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 ZNF705BP0CI00 300 aaPredicted RBP11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 UBE2G2P60604 165 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 EWSR1Q01844 656 aaKnown RBP eCLIP11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 TLE4Q04727 773 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 SSPNQ14714 243 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 FIP1L1Q6UN15 594 aaKnown RBP11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 ZNF826PQ6ZT77 177 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 HIST1H2BAQ96A08 127 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 FAM173AQ9BQD7 235 aa11.86□□□□□ -0.51
LPCAT1-201ENST00000283415 ZGRF1Q86YA3 2104 aa11.85□□□□□ -0.51
LPCAT1-201ENST00000283415 PPYP01298 95 aa11.85□□□□□ -0.51
LPCAT1-201ENST00000283415 CTSDP07339 412 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms