RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 SLC16A13Q7RTY0 426 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 TSPAN32Q96QS1 320 aa11.69□□□□□ -0.54
SMARCA5-201ENST00000283131 LTBP3Q9NS15 1303 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 A0A1W2PQM1 296 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 FFAR1O14842 300 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 FCGR3AP08637 254 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 GZMKP49863 264 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 NXPH1P58417 271 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 DUX5Q96PT3 197 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 TRBV7-9A0A0J9YWB2 115 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 MOSPD3O75425 235 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 MEF2CQ06413 473 aaPredicted RBP11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 SSPNQ14714 243 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 C17orf99Q6UX52 265 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 DLEU7Q6UYE1 221 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 KIR3DL3Q8N743 410 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 MRGPRX1Q96LB2 322 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 SLC25A35Q3KQZ1 300 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 RNF133Q8WVZ7 376 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 ARRDC5A6NEK1 342 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 HYPMO75409 117 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 FCGR2BP31994 310 aaPredicted RBP11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 RELQ04864 619 aaPredicted RBP11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 CLEC18BQ6UXF7 455 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 ABHD14BQ96IU4 210 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 C1QTNF9BB2RNN3 333 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 GABRG2P18507 467 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 B4GALNT1Q00973 533 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 LHX8Q68G74 356 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 HDHD3Q9BSH5 251 aaPredicted RBP11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 MIA3Q5JRA6 1907 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 KIF13AQ9H1H9 1805 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 CHST1O43916 411 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 SPATA45Q537H7 98 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 ZNF506Q5JVG8 444 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 MRGPRGQ86SM5 289 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 TDHQ8IZJ6 230 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 NFAM1Q8NET5 270 aaPredicted RBP11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 OR10D3Q8NH80 312 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 LHFPL5Q8TAF8 219 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 ORAI1Q96D31 301 aa11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 NXT2Q9NPJ8 142 aaKnown RBP11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 CICQ96RK0 1608 aaPredicted RBP11.68□□□□□ -0.54
SMARCA5-201ENST00000283131 LTN1O94822 1766 aa11.67□□□□□ -0.54
SMARCA5-201ENST00000283131 P2RY1P47900 373 aa11.67□□□□□ -0.54
SMARCA5-201ENST00000283131 NUBP1P53384 320 aa11.67□□□□□ -0.54
SMARCA5-201ENST00000283131 TRA2AQ13595 282 aaKnown RBP eCLIP11.67□□□□□ -0.543e-12■■■■□ 21.5
SMARCA5-201ENST00000283131 GPR82Q96P67 336 aa11.67□□□□□ -0.54
SMARCA5-201ENST00000283131 ERVFRD-1P60508 538 aa11.67□□□□□ -0.54
SMARCA5-201ENST00000283131 CDK5RAP2Q96SN8 1893 aa11.67□□□□□ -0.54
SMARCA5-201ENST00000283131 LINC01553A4QN01 128 aa11.67□□□□□ -0.54
SMARCA5-201ENST00000283131 PRKNO60260 465 aaPredicted RBP11.67□□□□□ -0.54
SMARCA5-201ENST00000283131 SCNM1Q9BWG6 230 aa11.67□□□□□ -0.54
SMARCA5-201ENST00000283131 FGF20Q9NP95 211 aaPredicted RBP11.67□□□□□ -0.54
SMARCA5-201ENST00000283131 PI4KAP42356 2102 aa11.67□□□□□ -0.54
SMARCA5-201ENST00000283131 DPTQ07507 201 aa11.67□□□□□ -0.54
SMARCA5-201ENST00000283131 AWAT1Q58HT5 328 aa11.67□□□□□ -0.54
SMARCA5-201ENST00000283131 KIRREL2Q6UWL6 708 aa11.67□□□□□ -0.54
SMARCA5-201ENST00000283131 HSPB7Q9UBY9 170 aa11.67□□□□□ -0.54
SMARCA5-201ENST00000283131 PAGE4O60829 102 aa11.67□□□□□ -0.54
SMARCA5-201ENST00000283131 FAM106AQ4KMX7 169 aa11.67□□□□□ -0.54
SMARCA5-201ENST00000283131 J3QR06 171 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 SMIM6P0DI80 62 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 CCL2P13500 99 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 ISL1P61371 349 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 PMCHL1Q16048 86 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 ZNF418Q8TF45 676 aaPredicted RBP11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 RNF7Q9UBF6 113 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 SSC4DQ8WTU2 575 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 MRPL16Q9NX20 251 aaKnown RBP11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 IGHV3-21A0A0B4J1V1 117 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 TRAV21A0A0B4J279 112 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 EML2O95834 649 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 NUTF2P61970 127 aaKnown RBP11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 PSG6Q00889 435 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 C1orf220Q5T0J3 134 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 MOGAT3Q86VF5 341 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 OR8D4Q8NGM9 314 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 STARD10Q9Y365 291 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 PPLO60437 1756 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 GFERP55789 205 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 ZNF117Q03924 483 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 F11RQ9Y624 299 aaKnown RBP11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 C7orf71A4D174 169 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 LINC00862A6NCI5 91 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 UPK1AO00322 258 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 SLC23A3Q6PIS1 610 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 MAFAQ8NHW3 353 aaPredicted RBP11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 MEGF10Q96KG7 1140 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 SF3B6Q9Y3B4 125 aaKnown RBP11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 LMO7DNF2Z398 122 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 TRGC1P0CF51 173 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 RPS20P60866 119 aaKnown RBP11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 SNRPD3P62318 126 aaKnown RBP11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 CX3CL1P78423 397 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 KLF9Q13886 244 aaPredicted RBP11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 KLK15Q9H2R5 256 aa11.66□□□□□ -0.54
SMARCA5-201ENST00000283131 FAM27D1Q5T7N8 215 aa11.65□□□□□ -0.54
SMARCA5-201ENST00000283131 FAM74A4Q5TZK3 123 aa11.65□□□□□ -0.54
SMARCA5-201ENST00000283131 TCF24Q7RTU0 167 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms