RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 FAM27E3Q08E93 113 aa12.97□□□□□ -0.33
SF3B4-201ENST00000271628 ABCA11PQ4W5N1 156 aa12.97□□□□□ -0.33
SF3B4-201ENST00000271628 SHEQ5VZ18 495 aa12.97□□□□□ -0.33
SF3B4-201ENST00000271628 SSX8Q7RTT4 187 aa12.97□□□□□ -0.33
SF3B4-201ENST00000271628 SVBPQ8N300 66 aa12.97□□□□□ -0.33
SF3B4-201ENST00000271628 TOMM40LQ969M1 308 aa12.97□□□□□ -0.33
SF3B4-201ENST00000271628 HES4Q9HCC6 221 aa12.97□□□□□ -0.33
SF3B4-201ENST00000271628 TAAR5O14804 337 aa12.97□□□□□ -0.33
SF3B4-201ENST00000271628 RBMXP38159 391 aaKnown RBP12.97□□□□□ -0.33
SF3B4-201ENST00000271628 IL15RAQ13261 267 aa12.97□□□□□ -0.33
SF3B4-201ENST00000271628 IGFBP7Q16270 282 aa12.97□□□□□ -0.33
SF3B4-201ENST00000271628 EIF5AL1Q6IS14 154 aaKnown RBP12.97□□□□□ -0.33
SF3B4-201ENST00000271628 ALKBH2Q6NS38 261 aa12.97□□□□□ -0.33
SF3B4-201ENST00000271628 Q6ZR03 302 aa12.97□□□□□ -0.33
SF3B4-201ENST00000271628 MRPL30Q8TCC3 161 aaKnown RBP12.97□□□□□ -0.33
SF3B4-201ENST00000271628 FZR1Q9UM11 496 aa12.97□□□□□ -0.33
SF3B4-201ENST00000271628 OR2H2O95918 312 aa12.96□□□□□ -0.33
SF3B4-201ENST00000271628 PPYP01298 95 aa12.96□□□□□ -0.33
SF3B4-201ENST00000271628 IGHV3-13P01766 116 aa12.96□□□□□ -0.33
SF3B4-201ENST00000271628 PIGPP57054 158 aa12.96□□□□□ -0.33
SF3B4-201ENST00000271628 FXYD4P59646 89 aa12.96□□□□□ -0.33
SF3B4-201ENST00000271628 RPS23P62266 143 aaKnown RBP12.96□□□□□ -0.33
SF3B4-201ENST00000271628 OR10C1Q96KK4 312 aa12.96□□□□□ -0.33
SF3B4-201ENST00000271628 TSNAXQ99598 290 aaKnown RBP12.96□□□□□ -0.33
SF3B4-201ENST00000271628 MSL2Q9HCI7 577 aa12.96□□□□□ -0.33
SF3B4-201ENST00000271628 OR5AC2Q9NZP5 309 aa12.96□□□□□ -0.33
SF3B4-201ENST00000271628 C16orf97H3BN30 126 aa12.95□□□□□ -0.34
SF3B4-201ENST00000271628 FAM157CP0CG43 387 aa12.95□□□□□ -0.34
SF3B4-201ENST00000271628 IGSF11Q5DX21 431 aa12.95□□□□□ -0.34
SF3B4-201ENST00000271628 ZNF880Q6PDB4 577 aa12.95□□□□□ -0.34
SF3B4-201ENST00000271628 IL34Q6ZMJ4 242 aa12.95□□□□□ -0.34
SF3B4-201ENST00000271628 C11orf53Q8IXP5 236 aa12.95□□□□□ -0.34
SF3B4-201ENST00000271628 CCDC71LQ8N9Z2 235 aa12.95□□□□□ -0.34
SF3B4-201ENST00000271628 TMED6Q8WW62 240 aa12.95□□□□□ -0.34
SF3B4-201ENST00000271628 SAT2Q96F10 170 aaPredicted RBP12.95□□□□□ -0.34
SF3B4-201ENST00000271628 MMP26Q9NRE1 261 aa12.95□□□□□ -0.34
SF3B4-201ENST00000271628 DUSP13Q9UII6 198 aa12.95□□□□□ -0.34
SF3B4-201ENST00000271628 MSGN1A6NI15 193 aa12.95□□□□□ -0.34
SF3B4-201ENST00000271628 SLC33A1O00400 549 aaPredicted RBP12.95□□□□□ -0.34
SF3B4-201ENST00000271628 SCTP09683 121 aa12.95□□□□□ -0.34
SF3B4-201ENST00000271628 SELENOVP59797 346 aa12.95□□□□□ -0.34
SF3B4-201ENST00000271628 NKX6-1P78426 367 aaPredicted RBP12.95□□□□□ -0.34
SF3B4-201ENST00000271628 RAB32Q13637 225 aa12.95□□□□□ -0.34
SF3B4-201ENST00000271628 C10orf91Q5T1B1 145 aa12.95□□□□□ -0.34
SF3B4-201ENST00000271628 OR4A4PQ8NGN8 299 aa12.95□□□□□ -0.34
SF3B4-201ENST00000271628 RTN4IP1Q8WWV3 396 aaPredicted RBP12.95□□□□□ -0.34
SF3B4-201ENST00000271628 GALNT14Q96FL9 552 aa12.95□□□□□ -0.34
SF3B4-201ENST00000271628 RSRP1Q9BUV0 290 aa12.95□□□□□ -0.34
SF3B4-201ENST00000271628 PIEZO2Q9H5I5 2752 aa12.94□□□□□ -0.34
SF3B4-201ENST00000271628 A6NLC8 198 aa12.94□□□□□ -0.34
SF3B4-201ENST00000271628 AADACP22760 399 aa12.94□□□□□ -0.34
SF3B4-201ENST00000271628 LMO1P25800 156 aa12.94□□□□□ -0.34
SF3B4-201ENST00000271628 KLF3P57682 345 aaPredicted RBP12.94□□□□□ -0.34
SF3B4-201ENST00000271628 MOB1BQ7L9L4 216 aa12.94□□□□□ -0.34
SF3B4-201ENST00000271628 FAM185AQ8N0U4 392 aa12.94□□□□□ -0.34
SF3B4-201ENST00000271628 BOLLQ8N9W6 283 aaKnown RBP12.94□□□□□ -0.34
SF3B4-201ENST00000271628 SLC5A7Q9GZV3 580 aa12.94□□□□□ -0.34
SF3B4-201ENST00000271628 SLC2A9Q9NRM0 540 aa12.94□□□□□ -0.34
SF3B4-201ENST00000271628 JKAMPQ9P055 326 aa12.94□□□□□ -0.34
SF3B4-201ENST00000271628 LPAR3Q9UBY5 353 aa12.94□□□□□ -0.34
SF3B4-201ENST00000271628 FAM74A7A6NL05 159 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 C1QTNF9BB2RNN3 333 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 SIRPB1O00241 398 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 SIGLEC5O15389 551 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 ZNF205O95201 554 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 CD200P41217 278 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 ARHGDIBP52566 201 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 FAM74A3Q4VXF1 159 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 WDR82Q6UXN9 313 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 GAPTQ8N292 157 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 CNTNAP3BQ96NU0 1288 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 SUCNR1Q9BXA5 334 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 NAA60Q9H7X0 242 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 PRR13Q9NZ81 148 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 SH3BGRL2Q9UJC5 107 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 CARHSP1Q9Y2V2 147 aaKnown RBP12.93□□□□□ -0.34
SF3B4-201ENST00000271628 ZGRF1Q86YA3 2104 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 IGLV3-9A0A075B6K5 115 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 IGHV3-64DA0A0J9YX35 117 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 HAND1O96004 215 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 HOXB5P09067 269 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 H2AFB1P0C5Y9 115 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 HLA-DRB3P79483 266 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 TMEM108Q6UXF1 575 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 ZNF497Q6ZNH5 498 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 C20orf204Q6ZNR8 217 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 OR2Z1Q8NG97 314 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 GSKIPQ9P0R6 139 aa12.93□□□□□ -0.34
SF3B4-201ENST00000271628 PRR14LQ5THK1 2151 aa12.92□□□□□ -0.34
SF3B4-201ENST00000271628 PTPRQQ9UMZ3 2332 aa12.92□□□□□ -0.34
SF3B4-201ENST00000271628 ZNF705EA8MWA4 302 aaPredicted RBP12.92□□□□□ -0.34
SF3B4-201ENST00000271628 IFNA21P01568 189 aa12.92□□□□□ -0.34
SF3B4-201ENST00000271628 CD40P25942 277 aa12.92□□□□□ -0.34
SF3B4-201ENST00000271628 PJVKQ0ZLH3 352 aa12.92□□□□□ -0.34
SF3B4-201ENST00000271628 HERPUD1Q15011 391 aa12.92□□□□□ -0.34
SF3B4-201ENST00000271628 PRR30Q53SZ7 412 aaPredicted RBP12.92□□□□□ -0.34
SF3B4-201ENST00000271628 PRAMEF6Q5VXH4 476 aa12.92□□□□□ -0.34
SF3B4-201ENST00000271628 ACP7Q6ZNF0 438 aa12.92□□□□□ -0.34
SF3B4-201ENST00000271628 ZNF826PQ6ZT77 177 aa12.92□□□□□ -0.34
SF3B4-201ENST00000271628 ZNF565Q8N9K5 539 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms