RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 TRAV38-1A0A0B4J264 116 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 IGHV1-69-2A0A0G2JMI3 117 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 FAM172BPA6NC97 362 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 NPIPB11E5RHQ5 1161 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 TUSC2O75896 110 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 CD8AP01732 235 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 DANCRP0C864 163 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 SULT1A3P0DMM9 295 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 SULT1A4P0DMN0 295 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 ZBTB25P24278 435 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 SEC61A1P61619 476 aaKnown RBP11.78□□□□□ -0.52
SS18-201ENST00000269137 DHODHQ02127 395 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 DHRS2Q13268 280 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 KRBOX4Q5JUW0 171 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 ZNF788Q6ZQV5 615 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 MUC20Q8N307 709 aaPredicted RBP11.78□□□□□ -0.52
SS18-201ENST00000269137 OR52B4Q8NGK2 314 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 OR5D13Q8NGL4 314 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 CCL17Q92583 94 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 FAM234AQ9H0X4 552 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 DNTTIP1Q9H147 329 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 ZNF69Q9UC07 566 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 CHD6Q8TD26 2715 aa11.78□□□□□ -0.52
SS18-201ENST00000269137 PPIAL4EA0A075B759 164 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 MEIKINA0A087WXM9 373 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 A0A1W2PPR1 153 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 A6NNC1 897 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 PPIAL4DF5H284 164 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 CTSDP07339 412 aaPredicted RBP11.77□□□□□ -0.52
SS18-201ENST00000269137 PPIAL4FP0DN26 164 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 TMEM128Q5BJH2 165 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 MEX3BQ6ZN04 569 aaKnown RBP11.77□□□□□ -0.52
SS18-201ENST00000269137 C5orf24Q7Z6I8 188 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 LYG2Q86SG7 212 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 SPICQ8N5J4 248 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 ADAD2Q8NCV1 583 aaKnown RBP11.77□□□□□ -0.52
SS18-201ENST00000269137 DEFB108BQ8NET1 73 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 OR11H7Q8NGC8 314 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 ZFAND1Q8TCF1 268 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 GAFA1Q96PS6 74 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 VRK1Q99986 396 aaPredicted RBP11.77□□□□□ -0.52
SS18-201ENST00000269137 TRAF4Q9BUZ4 470 aaPredicted RBP11.77□□□□□ -0.52
SS18-201ENST00000269137 TMPRSS13Q9BYE2 586 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 ZNF665Q9H7R5 613 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 TAF9BQ9HBM6 251 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 KCNIP1Q9NZI2 227 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 PPIAL4AQ9Y536 164 aa11.77□□□□□ -0.52
SS18-201ENST00000269137 TRAV39A0A0B4J263 110 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 BET1O15155 118 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 SIGLEC5O15389 551 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 ZNF205O95201 554 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 PPYP01298 95 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 C1QBP02746 253 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 ZNF728P0DKX0 622 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 PGAM2P15259 253 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 AADACP22760 399 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 NFYAP23511 347 aaPredicted RBP11.76□□□□□ -0.53
SS18-201ENST00000269137 ERP29P30040 261 aaKnown RBP11.76□□□□□ -0.53
SS18-201ENST00000269137 GLIPR1P48060 266 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 HERV-K104P61576 105 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 PPP1R1AQ13522 171 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 CR1LQ2VPA4 569 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 C6orf183Q5T699 404 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 TRAT1Q6PIZ9 186 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 ZNRF1Q8ND25 227 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 TMEM230Q96A57 120 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 KIRREL1Q96J84 757 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 LURAP1Q96LR2 239 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 FXYD6Q9H0Q3 95 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 RAB1BQ9H0U4 201 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 SLC23A1Q9UHI7 598 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 OPN4Q9UHM6 478 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 C14orf166Q9Y224 244 aaKnown RBP11.76□□□□□ -0.53
SS18-201ENST00000269137 LRBAP50851 2863 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 C9orf170A2RU37 121 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 FSTL3O95633 263 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 GYPAP02724 150 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 SOD3P08294 240 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 AKR1C4P17516 323 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 P2RX3P56373 397 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 BAMBIQ13145 260 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 HFEQ30201 348 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 OR10J5Q8NHC4 309 aa11.76□□□□□ -0.53
SS18-201ENST00000269137 ODAMA1E959 279 aa11.75□□□□□ -0.53
SS18-201ENST00000269137 C12orf77C9JDV5 145 aa11.75□□□□□ -0.53
SS18-201ENST00000269137 TNFRSF13BO14836 293 aaPredicted RBP11.75□□□□□ -0.53
SS18-201ENST00000269137 HLA-AP01891 365 aaKnown RBP11.75□□□□□ -0.53
SS18-201ENST00000269137 RNF224P0DH78 156 aa11.75□□□□□ -0.53
SS18-201ENST00000269137 CXCL3P19876 107 aa11.75□□□□□ -0.53
SS18-201ENST00000269137 PI3P19957 117 aa11.75□□□□□ -0.53
SS18-201ENST00000269137 GZMKP49863 264 aa11.75□□□□□ -0.53
SS18-201ENST00000269137 IL13RA1P78552 427 aa11.75□□□□□ -0.53
SS18-201ENST00000269137 MRPS11P82912 194 aaKnown RBP11.75□□□□□ -0.53
SS18-201ENST00000269137 LPCAT3Q6P1A2 487 aa11.75□□□□□ -0.53
SS18-201ENST00000269137 H1FOOQ8IZA3 346 aaPredicted RBP11.75□□□□□ -0.53
SS18-201ENST00000269137 SLC38A6Q8IZM9 456 aa11.75□□□□□ -0.53
SS18-201ENST00000269137 C12orf45Q8N5I9 185 aaPredicted RBP11.75□□□□□ -0.53
SS18-201ENST00000269137 CCL13Q99616 98 aa11.75□□□□□ -0.53
SS18-201ENST00000269137 SPOCK3Q9BQ16 436 aa11.75□□□□□ -0.53
SS18-201ENST00000269137 LRRK2Q5S007 2527 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms