RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 TRAV39A0A0B4J263 110 aa13.48□□□□□ -0.25
SNRPF-201ENST00000266735 POM121CA8CG34 1229 aa13.48□□□□□ -0.25
SNRPF-201ENST00000266735 ORC5O43913 435 aa13.48□□□□□ -0.25
SNRPF-201ENST00000266735 NAPSAO96009 420 aa13.48□□□□□ -0.25
SNRPF-201ENST00000266735 GNB3P16520 340 aa13.48□□□□□ -0.25
SNRPF-201ENST00000266735 CDK2P24941 298 aa13.48□□□□□ -0.25
SNRPF-201ENST00000266735 MRPS15P82914 257 aaKnown RBP13.48□□□□□ -0.25
SNRPF-201ENST00000266735 OR52W1Q6IF63 320 aa13.48□□□□□ -0.25
SNRPF-201ENST00000266735 ZNF782Q6ZMW2 699 aaPredicted RBP13.48□□□□□ -0.25
SNRPF-201ENST00000266735 ZNF554Q86TJ5 538 aa13.48□□□□□ -0.25
SNRPF-201ENST00000266735 SAMD12Q8N8I0 201 aa13.48□□□□□ -0.25
SNRPF-201ENST00000266735 DYNC2LI1Q8TCX1 351 aa13.48□□□□□ -0.25
SNRPF-201ENST00000266735 CMSS1Q9BQ75 279 aaKnown RBP13.48□□□□□ -0.25
SNRPF-201ENST00000266735 CHMP1AQ9HD42 196 aaPredicted RBP13.48□□□□□ -0.25
SNRPF-201ENST00000266735 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.48□□□□□ -0.25
SNRPF-201ENST00000266735 DIABLOQ9NR28 239 aa13.48□□□□□ -0.25
SNRPF-201ENST00000266735 CCDC59Q9P031 241 aaKnown RBP13.48□□□□□ -0.25
SNRPF-201ENST00000266735 NDUFA13Q9P0J0 144 aa13.48□□□□□ -0.25
SNRPF-201ENST00000266735 COMMD3Q9UBI1 195 aa13.48□□□□□ -0.25
SNRPF-201ENST00000266735 KCNK7Q9Y2U2 307 aa13.48□□□□□ -0.25
SNRPF-201ENST00000266735 SESN1Q9Y6P5 492 aa13.48□□□□□ -0.25
SNRPF-201ENST00000266735 HIVEP2P31629 2446 aa13.48□□□□□ -0.25
SNRPF-201ENST00000266735 IGHV3OR16-10A0A075B7F0 116 aa13.47□□□□□ -0.25
SNRPF-201ENST00000266735 IGHV1-69DA0A0B4J2H0 117 aa13.47□□□□□ -0.25
SNRPF-201ENST00000266735 NPIPB11E5RHQ5 1161 aa13.47□□□□□ -0.25
SNRPF-201ENST00000266735 RNASEK-C17orf49H0YIS7 233 aa13.47□□□□□ -0.25
SNRPF-201ENST00000266735 IGHV1-69P01742 117 aa13.47□□□□□ -0.25
SNRPF-201ENST00000266735 EPHA1P21709 976 aa13.47□□□□□ -0.25
SNRPF-201ENST00000266735 SSTR5P35346 364 aa13.47□□□□□ -0.25
SNRPF-201ENST00000266735 UBE2E1P51965 193 aa13.47□□□□□ -0.25
SNRPF-201ENST00000266735 DLX1P56177 255 aa13.47□□□□□ -0.25
SNRPF-201ENST00000266735 PRAMEF5Q5TYX0 476 aa13.47□□□□□ -0.25
SNRPF-201ENST00000266735 OR10A7Q8NGE5 316 aa13.47□□□□□ -0.25
SNRPF-201ENST00000266735 OR13D1Q8NGV5 346 aa13.47□□□□□ -0.25
SNRPF-201ENST00000266735 S100A16Q96FQ6 103 aaKnown RBP13.47□□□□□ -0.25
SNRPF-201ENST00000266735 ZMAT3Q9HA38 289 aaKnown RBP13.47□□□□□ -0.25
SNRPF-201ENST00000266735 ANK3Q12955 4377 aaKnown RBP13.47□□□□□ -0.25
SNRPF-201ENST00000266735 A0A075B6Q4 140 aa13.46□□□□□ -0.25
SNRPF-201ENST00000266735 TRBV6-6A0A0A6YYG2 114 aa13.46□□□□□ -0.25
SNRPF-201ENST00000266735 GSTP1P09211 210 aaKnown RBP13.46□□□□□ -0.25
SNRPF-201ENST00000266735 CD3GP09693 182 aa13.46□□□□□ -0.25
SNRPF-201ENST00000266735 RCC1P18754 421 aaPredicted RBP13.46□□□□□ -0.25
SNRPF-201ENST00000266735 OMGP23515 440 aa13.46□□□□□ -0.25
SNRPF-201ENST00000266735 PRB3Q04118 309 aaPredicted RBP13.46□□□□□ -0.25
SNRPF-201ENST00000266735 KLRD1Q13241 179 aa13.46□□□□□ -0.25
SNRPF-201ENST00000266735 CDNFQ49AH0 187 aa13.46□□□□□ -0.25
SNRPF-201ENST00000266735 HCP5Q6MZN7 132 aa13.46□□□□□ -0.25
SNRPF-201ENST00000266735 C9orf139Q6ZV77 190 aa13.46□□□□□ -0.25
SNRPF-201ENST00000266735 MOB1BQ7L9L4 216 aa13.46□□□□□ -0.25
SNRPF-201ENST00000266735 PDZD9Q8IXQ8 264 aa13.46□□□□□ -0.25
SNRPF-201ENST00000266735 ARL11Q969Q4 196 aa13.46□□□□□ -0.25
SNRPF-201ENST00000266735 MS4A7Q9GZW8 240 aaPredicted RBP13.46□□□□□ -0.25
SNRPF-201ENST00000266735 TMEM133Q9H2Q1 129 aa13.46□□□□□ -0.25
SNRPF-201ENST00000266735 IDI2-AS1Q9NZ38 188 aa13.46□□□□□ -0.25
SNRPF-201ENST00000266735 KCNIP1Q9NZI2 227 aa13.46□□□□□ -0.25
SNRPF-201ENST00000266735 MGAT4AQ9UM21 535 aa13.46□□□□□ -0.25
SNRPF-201ENST00000266735 C12orf77C9JDV5 145 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 C15orf65H3BRN8 121 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 SPINT2O43291 252 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 MMP23AO75900 390 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 APOA1P02647 267 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 COX7A1P24310 79 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 FPR2P25090 351 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 ARFRP1Q13795 201 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 TMEM30BQ3MIR4 351 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 ZNF260Q3ZCT1 412 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 HACD4Q5VWC8 232 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 OLFML2AQ68BL7 652 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 ZNF880Q6PDB4 577 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 RFESDQ8TAC1 157 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 KIRREL1Q96J84 757 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 HDHD3Q9BSH5 251 aaPredicted RBP13.45□□□□□ -0.26
SNRPF-201ENST00000266735 TAF9BQ9HBM6 251 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 ZNF69Q9UC07 566 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 SVEP1Q4LDE5 3571 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 TRAV18A0A075B6X5 111 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 A0A087X0M5 115 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 A0A1B0GX30 115 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 DPPA5A6NC42 116 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 XRCC3O43542 346 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 GDNFP39905 211 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 HMGN3Q15651 99 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 PNLIPRP3Q17RR3 467 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 RUSC1-AS1Q66K80 236 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 BRD3OSQ6XYD6 125 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 PNKDQ8N490 385 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 OR11H6Q8NGC7 330 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 SETD6Q8TBK2 473 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 DGCR14Q96DF8 476 aaKnown RBP13.45□□□□□ -0.26
SNRPF-201ENST00000266735 SUCNR1Q9BXA5 334 aa13.45□□□□□ -0.26
SNRPF-201ENST00000266735 IGHV2-26A0A0B4J1V2 119 aa13.44□□□□□ -0.26
SNRPF-201ENST00000266735 TMEM235A6NFC5 223 aa13.44□□□□□ -0.26
SNRPF-201ENST00000266735 F2RL2O00254 374 aa13.44□□□□□ -0.26
SNRPF-201ENST00000266735 NPFFO15130 113 aa13.44□□□□□ -0.26
SNRPF-201ENST00000266735 HPGDSO60760 199 aa13.44□□□□□ -0.26
SNRPF-201ENST00000266735 HBZP02008 142 aa13.44□□□□□ -0.26
SNRPF-201ENST00000266735 EIF4EP06730 217 aaKnown RBP13.44□□□□□ -0.26
SNRPF-201ENST00000266735 NFYBP25208 207 aa13.44□□□□□ -0.26
SNRPF-201ENST00000266735 CD34P28906 385 aa13.44□□□□□ -0.26
SNRPF-201ENST00000266735 TALDO1P37837 337 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms