RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 MUCL1Q96DR8 90 aa14.37□□□□□ -0.11
SQLE-201ENST00000265896 PLEKHF2Q9H8W4 249 aa14.37□□□□□ -0.11
SQLE-201ENST00000265896 METTL1Q9UBP6 276 aaKnown RBP14.37□□□□□ -0.11
SQLE-201ENST00000265896 NOSIPQ9Y314 301 aaKnown RBP14.37□□□□□ -0.11
SQLE-201ENST00000265896 MRPL33O75394 65 aaKnown RBP14.37□□□□□ -0.11
SQLE-201ENST00000265896 CST2P09228 141 aa14.37□□□□□ -0.11
SQLE-201ENST00000265896 TUBG1P23258 451 aa14.37□□□□□ -0.11
SQLE-201ENST00000265896 MRPL21Q7Z2W9 205 aaKnown RBP14.37□□□□□ -0.11
SQLE-201ENST00000265896 HLA-CQ95604 372 aa14.37□□□□□ -0.11
SQLE-201ENST00000265896 PRO1933Q9H354 126 aa14.37□□□□□ -0.11
SQLE-201ENST00000265896 RNF150Q9ULK6 438 aa14.37□□□□□ -0.11
SQLE-201ENST00000265896 KCNS2Q9ULS6 477 aa14.37□□□□□ -0.11
SQLE-201ENST00000265896 WDR1O75083 606 aa14.37□□□□□ -0.11
SQLE-201ENST00000265896 MLF1P58340 268 aa14.37□□□□□ -0.11
SQLE-201ENST00000265896 ZNF266Q14584 549 aa14.37□□□□□ -0.11
SQLE-201ENST00000265896 HMGN3Q15651 99 aa14.37□□□□□ -0.11
SQLE-201ENST00000265896 WDR25Q64LD2 544 aaPredicted RBP14.37□□□□□ -0.11
SQLE-201ENST00000265896 TDHQ8IZJ6 230 aa14.37□□□□□ -0.11
SQLE-201ENST00000265896 PLPPR2Q96GM1 343 aa14.37□□□□□ -0.11
SQLE-201ENST00000265896 SIGLEC12Q96PQ1 595 aa14.37□□□□□ -0.11
SQLE-201ENST00000265896 TOLLIPQ9H0E2 274 aa14.37□□□□□ -0.11
SQLE-201ENST00000265896 SEBOXQ9HB31 216 aaPredicted RBP14.37□□□□□ -0.11
SQLE-201ENST00000265896 TAAR3PQ9P1P4 343 aa14.37□□□□□ -0.11
SQLE-201ENST00000265896 PPIHO43447 177 aaKnown RBP14.36□□□□□ -0.11
SQLE-201ENST00000265896 SCAF4O95104 1147 aaKnown RBP14.36□□□□□ -0.11
SQLE-201ENST00000265896 IFNA17P01571 189 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 S100A8P05109 93 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 FOLR3P41439 243 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 LINC00205P59089 165 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 ARL16Q0P5N6 197 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 ELOBQ15370 118 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 LINC00696Q6ZRV3 163 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 FOXL2NBQ6ZUU3 175 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 TMEM105Q8N8V8 129 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 ZNF383Q8NA42 475 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 LYRM2Q9NU23 88 aaPredicted RBP14.36□□□□□ -0.11
SQLE-201ENST00000265896 STRAPQ9Y3F4 350 aaKnown RBP14.36□□□□□ -0.11
SQLE-201ENST00000265896 A0A087WZY1 265 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 LRRC3CA6NJW4 275 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 CD55P08174 381 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 RHEBQ15382 184 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 RNF212Q495C1 297 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 OR8G2PQ6IF36 304 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 TCEAL6Q6IPX3 200 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 OR2V1Q8NHB1 315 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 PFDN5Q99471 154 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 DUSP23Q9BVJ7 150 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 SIT1Q9Y3P8 196 aa14.36□□□□□ -0.11
SQLE-201ENST00000265896 CNOT1A5YKK6 2376 aaKnown RBP14.36□□□□□ -0.11
SQLE-201ENST00000265896 KIAA1324LA8MWY0 1029 aaPredicted RBP14.35□□□□□ -0.11
SQLE-201ENST00000265896 SIRPB1O00241 398 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 TOX3O15405 576 aaPredicted RBP14.35□□□□□ -0.11
SQLE-201ENST00000265896 TMEM42Q69YG0 159 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 OR2T2Q6IF00 324 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.35□□□□□ -0.11
SQLE-201ENST00000265896 GPR146Q96CH1 333 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 TAAR9Q96RI9 348 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 Q9N2K0 584 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 RPRMQ9NS64 109 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 CACNG5Q9UF02 275 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 RPL36A-HNRNPH2H7BZ11 118 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 HSPA12AO43301 675 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 CA11O75493 328 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 SERPINE2P07093 398 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 SOD3P08294 240 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 CEBPDP49716 269 aaPredicted RBP14.35□□□□□ -0.11
SQLE-201ENST00000265896 PAX9P55771 341 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 RAB2AP61019 212 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 LRTM2Q8N967 370 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 OR2Y1Q8NGV0 311 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 PLPPR1Q8TBJ4 325 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 CPT1CQ8TCG5 803 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 NIPSNAP3BQ9BS92 247 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 PLK3Q9H4B4 646 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 PRDM6Q9NQX0 595 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 AURKAIP1Q9NWT8 199 aaPredicted RBP14.35□□□□□ -0.11
SQLE-201ENST00000265896 SPTBN2O15020 2390 aa14.35□□□□□ -0.11
SQLE-201ENST00000265896 CADP27708 2225 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 PGLYRP1O75594 196 aaPredicted RBP14.34□□□□□ -0.11
SQLE-201ENST00000265896 FABP4P15090 132 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 CA6P23280 308 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 COL19A1Q14993 1142 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 HIKESHIQ53FT3 197 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 SPANXN5Q5MJ07 72 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 CXorf65A6NEN9 183 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 TRAPPC2LH3BP13 241 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 TUSC2O75896 110 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 COL8A2P25067 703 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 TESK1Q15569 626 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 TMEM211Q6ICI0 200 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 UNQ6494/PRO21346Q6UXR6 183 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 CXorf67Q86X51 503 aaPredicted RBP14.34□□□□□ -0.11
SQLE-201ENST00000265896 ZDHHC23Q8IYP9 409 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 TINAGQ9UJW2 476 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 HIST1H2BKO60814 126 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 HIST1H2BJP06899 126 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 MMP7P09237 267 aaPredicted RBP14.34□□□□□ -0.11
SQLE-201ENST00000265896 HIST1H2BOP23527 126 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 S100PP25815 95 aa14.34□□□□□ -0.11
SQLE-201ENST00000265896 HIST1H2BBP33778 126 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms