RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 NUDT11Q96G61 164 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 HSPB9Q9BQS6 159 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 VAMP8Q9BV40 100 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 RAB11FIP5Q9BXF6 653 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 CENPMQ9NSP4 180 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 CACNA1GO43497 2377 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 A0A1W2PN81 502 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 NKX2-6A6NCS4 301 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 ZNF878C9JN71 531 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 SSSCA1O60232 199 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 CDS2O95674 445 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 CHRNA7P36544 502 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 HIST1H3AP68431 136 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 CHRFAM7AQ494W8 412 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 OR5AS1Q8N127 324 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 ST6GALNAC3Q8NDV1 305 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 OR52N5Q8NH56 324 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 KCNG3Q8TAE7 436 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 IMMP2LQ96T52 175 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 RTN4RQ9BZR6 473 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 RPRMQ9NS64 109 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 SELENOKQ9Y6D0 94 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 MUC22E2RYF6 1773 aaPredicted RBP7.58□□□□□ -1.2
VAPB-201ENST00000265619 KIAA1549Q9HCM3 1950 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 C5orf63A6NC05 138 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 ST8SIA3O43173 380 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 NKX2-2O95096 273 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 TOMM40O96008 361 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 HLA-DOBP13765 273 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 BLKP51451 505 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 DUSP3P51452 185 aaPredicted RBP7.58□□□□□ -1.2
VAPB-201ENST00000265619 ZNF41P51814 821 aaPredicted RBP7.58□□□□□ -1.2
VAPB-201ENST00000265619 OR1D5P58170 312 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 RPL15P61313 204 aaKnown RBP7.58□□□□□ -1.2
VAPB-201ENST00000265619 MRPS34P82930 218 aaKnown RBP7.58□□□□□ -1.2
VAPB-201ENST00000265619 SMIM15Q7Z3B0 74 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 C6orf201Q7Z4U5 140 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 ATG4DQ86TL0 474 aaPredicted RBP7.58□□□□□ -1.2
VAPB-201ENST00000265619 MRPL52Q86TS9 123 aaKnown RBP7.58□□□□□ -1.2
VAPB-201ENST00000265619 LGI3Q8N145 548 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 TNFRSF14Q92956 283 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 C18orf12Q96KH6 178 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 TMEM59Q9BXS4 323 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 PRSS50Q9UI38 385 aa7.58□□□□□ -1.2
VAPB-201ENST00000265619 BLACEA4D250 179 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 FRMD6-AS1P0C7T7 363 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 HSD11B1P28845 292 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 PRRX1P54821 245 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 HTD2P86397 168 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 PNRC1Q12796 327 aaPredicted RBP7.57□□□□□ -1.2
VAPB-201ENST00000265619 EXT1Q16394 746 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 FBLN7Q53RD9 439 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 FBXO42Q6P3S6 717 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 CRIP3Q6Q6R5 217 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 GRINAQ7Z429 371 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 LINC01551Q86U37 167 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 DTX1Q86Y01 620 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 D2HGDHQ8N465 521 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 MFSD9Q8NBP5 474 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 OR4D5Q8NGN0 318 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 MSI2Q96DH6 328 aaKnown RBP7.57□□□□□ -1.2
VAPB-201ENST00000265619 TECTBQ96PL2 329 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 SMIM7Q9BQ49 75 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 TECTAO75443 2155 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 CPAMD8Q8IZJ3 1885 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 PATE3B3GLJ2 98 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 H3BP45 60 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 IL3RAP26951 378 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 SFTPDP35247 375 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 ADMP35318 185 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 OPRM1P35372 400 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 ACKR1Q16570 336 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 BRICD5Q6PL45 260 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 TMEM252Q8N6L7 170 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 TBL1XR1Q9BZK7 514 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 CISD1Q9NZ45 108 aaKnown RBP7.57□□□□□ -1.2
VAPB-201ENST00000265619 FBXL7Q9UJT9 491 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 CLDN16Q9Y5I7 305 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 COX11Q9Y6N1 276 aa7.57□□□□□ -1.2
VAPB-201ENST00000265619 PRSS37A4D1T9 235 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 H0YIG0 161 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 TGFBR3LH3BV60 316 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 H7BYZ3 331 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 CTRLP40313 264 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 IL13RA2Q14627 380 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 FAM57BQ71RH2 274 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 TMPRSS7Q7RTY8 843 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 OR8G5Q8NG78 346 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 OR4C5Q8NGB2 326 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 OR51E1Q8TCB6 317 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 APH1AQ96BI3 265 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 MMABQ96EY8 250 aaPredicted RBP7.56□□□□□ -1.2
VAPB-201ENST00000265619 SCGB3A2Q96PL1 93 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 RNF2Q99496 336 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 ZFYVE21Q9BQ24 234 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 TMEM9BQ9NQ34 198 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 LAMTOR2Q9Y2Q5 125 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 B3GALT2O43825 422 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 PITX3O75364 302 aa7.56□□□□□ -1.2
VAPB-201ENST00000265619 HYPMO75409 117 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms