RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ZNF391Q9UJN7 358 aa17.14■□□□□ 0.33
CSPG5-201ENST00000264723 STRAPQ9Y3F4 350 aaKnown RBP17.14■□□□□ 0.33
CSPG5-201ENST00000264723 NGFP01138 241 aa17.14■□□□□ 0.33
CSPG5-201ENST00000264723 MPV17LQ2QL34 196 aa17.14■□□□□ 0.33
CSPG5-201ENST00000264723 ADAMTS17Q8TE56 1095 aa17.14■□□□□ 0.33
CSPG5-201ENST00000264723 MYOZ1Q9NP98 299 aaPredicted RBP17.14■□□□□ 0.33
CSPG5-201ENST00000264723 RFNGQ9Y644 331 aa17.14■□□□□ 0.33
CSPG5-201ENST00000264723 LOC390937A0A1W2PQ73 354 aa17.13■□□□□ 0.33
CSPG5-201ENST00000264723 SULT1A1P50225 295 aa17.13■□□□□ 0.33
CSPG5-201ENST00000264723 MDP1Q86V88 176 aa17.13■□□□□ 0.33
CSPG5-201ENST00000264723 LHX4Q969G2 390 aa17.13■□□□□ 0.33
CSPG5-201ENST00000264723 OR2J1Q9GZK6 312 aa17.13■□□□□ 0.33
CSPG5-201ENST00000264723 PSENENQ9NZ42 101 aa17.13■□□□□ 0.33
CSPG5-201ENST00000264723 ABCA1O95477 2261 aa17.13■□□□□ 0.33
CSPG5-201ENST00000264723 WIPF3A6NGB9 483 aa17.13■□□□□ 0.33
CSPG5-201ENST00000264723 FTH1P19P0C7X4 201 aa17.13■□□□□ 0.33
CSPG5-201ENST00000264723 Q96M66 194 aa17.13■□□□□ 0.33
CSPG5-201ENST00000264723 GCM1Q9NP62 436 aa17.13■□□□□ 0.33
CSPG5-201ENST00000264723 ZNF787Q6DD87 383 aa17.13■□□□□ 0.33
CSPG5-201ENST00000264723 LFNGQ8NES3 379 aa17.13■□□□□ 0.33
CSPG5-201ENST00000264723 IGFBP7Q16270 282 aa17.12■□□□□ 0.33
CSPG5-201ENST00000264723 ATP23Q9Y6H3 246 aa17.12■□□□□ 0.33
CSPG5-201ENST00000264723 RNF212BA8MTL3 300 aa17.12■□□□□ 0.33
CSPG5-201ENST00000264723 HBE1P02100 147 aa17.12■□□□□ 0.33
CSPG5-201ENST00000264723 MT-ND4LP03901 98 aa17.12■□□□□ 0.33
CSPG5-201ENST00000264723 HBG1P69891 147 aa17.12■□□□□ 0.33
CSPG5-201ENST00000264723 HBG2P69892 147 aa17.12■□□□□ 0.33
CSPG5-201ENST00000264723 PDLIM3Q53GG5 364 aaPredicted RBP17.12■□□□□ 0.33
CSPG5-201ENST00000264723 GUCD1Q96NT3 240 aa17.12■□□□□ 0.33
CSPG5-201ENST00000264723 A0A1W2PPV4 95 aa17.12■□□□□ 0.33
CSPG5-201ENST00000264723 PPP1R2P9O14990 202 aa17.12■□□□□ 0.33
CSPG5-201ENST00000264723 RBPJQ06330 500 aa17.12■□□□□ 0.33
CSPG5-201ENST00000264723 CALHM1Q8IU99 346 aa17.12■□□□□ 0.33
CSPG5-201ENST00000264723 PRRC2CQ9Y520 2896 aaKnown RBP17.12■□□□□ 0.33
CSPG5-201ENST00000264723 TRGV8A0A0C4DH27 118 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 CRYM-AS1A6NIL9 109 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 RAB5CP51148 216 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 COL19A1Q14993 1142 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 ZNF610Q8N9Z0 462 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 SCCPDHQ8NBX0 429 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 IFT22Q9H7X7 185 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 AUP1Q9Y679 476 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 HEATR1Q9H583 2144 aaKnown RBP17.11■□□□□ 0.33
CSPG5-201ENST00000264723 DNPH1O43598 174 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 GNPNAT1Q96EK6 184 aaPredicted RBP17.11■□□□□ 0.33
CSPG5-201ENST00000264723 TP53RKQ96S44 253 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 IL36RNQ9UBH0 155 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 UBE2L5PA0A1B0GUS4 154 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 SCAF4O95104 1147 aaKnown RBP17.11■□□□□ 0.33
CSPG5-201ENST00000264723 CEACAM6P40199 344 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 FBXW9Q5XUX1 488 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 H2BFWTQ7Z2G1 175 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 FAM117AQ9C073 453 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 PARP11Q9NR21 331 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 DECR2Q9NUI1 292 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 RBFOX3A6NFN3 312 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 ENSAO43768 121 aaKnown RBP17.11■□□□□ 0.33
CSPG5-201ENST00000264723 HNF1AP20823 631 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 PLGLAQ15195 96 aa17.11■□□□□ 0.33
CSPG5-201ENST00000264723 MYPOPQ86VE0 399 aaPredicted RBP17.11■□□□□ 0.33
CSPG5-201ENST00000264723 TRIOO75962 3097 aa17.1■□□□□ 0.33
CSPG5-201ENST00000264723 DFFBO76075 338 aa17.1■□□□□ 0.33
CSPG5-201ENST00000264723 ANOS1P23352 680 aa17.1■□□□□ 0.33
CSPG5-201ENST00000264723 RBMS3Q6XE24 437 aaKnown RBP17.1■□□□□ 0.33
CSPG5-201ENST00000264723 SYNGR1O43759 233 aa17.1■□□□□ 0.33
CSPG5-201ENST00000264723 IL13RA2Q14627 380 aa17.1■□□□□ 0.33
CSPG5-201ENST00000264723 PRAMEF5Q5TYX0 476 aa17.1■□□□□ 0.33
CSPG5-201ENST00000264723 PRAMEF6Q5VXH4 476 aa17.1■□□□□ 0.33
CSPG5-201ENST00000264723 OR4A16Q8NH70 328 aa17.1■□□□□ 0.33
CSPG5-201ENST00000264723 RRP8O43159 456 aaKnown RBP17.1■□□□□ 0.33
CSPG5-201ENST00000264723 YIF1AO95070 293 aa17.1■□□□□ 0.33
CSPG5-201ENST00000264723 SNCAP37840 140 aa17.1■□□□□ 0.33
CSPG5-201ENST00000264723 RBM11P57052 281 aaKnown RBP17.1■□□□□ 0.33
CSPG5-201ENST00000264723 S100A12P80511 92 aa17.1■□□□□ 0.33
CSPG5-201ENST00000264723 MRGPRDQ8TDS7 321 aa17.1■□□□□ 0.33
CSPG5-201ENST00000264723 MRGPRFQ96AM1 343 aa17.1■□□□□ 0.33
CSPG5-201ENST00000264723 USB1Q9BQ65 265 aaKnown RBP17.1■□□□□ 0.33
CSPG5-201ENST00000264723 CHD9Q3L8U1 2897 aa17.09■□□□□ 0.33
CSPG5-201ENST00000264723 FABP1P07148 127 aa17.09■□□□□ 0.33
CSPG5-201ENST00000264723 OR3A1P47881 315 aa17.09■□□□□ 0.33
CSPG5-201ENST00000264723 NUFIP2Q7Z417 695 aaKnown RBP17.09■□□□□ 0.33
CSPG5-201ENST00000264723 TPRX1Q8N7U7 411 aa17.09■□□□□ 0.33
CSPG5-201ENST00000264723 TCEAL7Q9BRU2 100 aa17.09■□□□□ 0.33
CSPG5-201ENST00000264723 ABHD14AQ9BUJ0 271 aa17.09■□□□□ 0.33
CSPG5-201ENST00000264723 RAB5AP20339 215 aa17.09■□□□□ 0.33
CSPG5-201ENST00000264723 ZNF528Q3MIS6 628 aa17.09■□□□□ 0.33
CSPG5-201ENST00000264723 NSUN5P2Q63ZY6 315 aa17.09■□□□□ 0.33
CSPG5-201ENST00000264723 SLC25A40Q8TBP6 338 aa17.09■□□□□ 0.33
CSPG5-201ENST00000264723 HPSE2Q8WWQ2 592 aa17.09■□□□□ 0.33
CSPG5-201ENST00000264723 GALMQ96C23 342 aa17.09■□□□□ 0.33
CSPG5-201ENST00000264723 MARS2Q96GW9 593 aaKnown RBP17.09■□□□□ 0.33
CSPG5-201ENST00000264723 CLEC18AA5D8T8 446 aa17.09■□□□□ 0.33
CSPG5-201ENST00000264723 SELEP16581 610 aa17.09■□□□□ 0.33
CSPG5-201ENST00000264723 P2RY1P47900 373 aa17.09■□□□□ 0.33
CSPG5-201ENST00000264723 EIF4E3Q8N5X7 224 aaKnown RBP17.09■□□□□ 0.33
CSPG5-201ENST00000264723 CLEC18CQ8NCF0 446 aa17.09■□□□□ 0.33
CSPG5-201ENST00000264723 ADGRG7Q96K78 797 aa17.09■□□□□ 0.33
CSPG5-201ENST00000264723 HFEQ30201 348 aa17.08■□□□□ 0.33
CSPG5-201ENST00000264723 OR10D4PQ8NGN7 298 aa17.08■□□□□ 0.33
CSPG5-201ENST00000264723 TECTBQ96PL2 329 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms