RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 ABCA4P78363 2273 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 TRBV6-7A0A0A0MS04 114 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 A0A1B0GW55 424 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 NPIPB11E5RHQ5 1161 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 SIGLEC5O15389 551 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 TUSC2O75896 110 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 DUX4L2P0CJ85 424 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 DUX4L3P0CJ86 424 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 DUX4L4P0CJ87 422 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 DUX4L5P0CJ88 424 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 DUX4L6P0CJ89 424 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 DUX4L7P0CJ90 424 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 SELLP14151 372 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 AADACP22760 399 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 TAS2R31P59538 309 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 HFEQ30201 348 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 DUX4L9Q6RFH8 374 aaPredicted RBP19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 TPRX1Q8N7U7 411 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 OR5D13Q8NGL4 314 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 KIRREL1Q96J84 757 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 ST6GAL2Q96JF0 529 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 FAM234AQ9H0X4 552 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 DNTTIP1Q9H147 329 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 DUX4Q9UBX2 424 aa19.08■□□□□ 0.64
SMARCB1-201ENST00000263121 HRNRQ86YZ3 2850 aaPredicted RBP19.07■□□□□ 0.64
SMARCB1-201ENST00000263121 TNFRSF13BO14836 293 aaPredicted RBP19.07■□□□□ 0.64
SMARCB1-201ENST00000263121 SSNA1O43805 119 aa19.07■□□□□ 0.64
SMARCB1-201ENST00000263121 DIRAS3O95661 229 aa19.07■□□□□ 0.64
SMARCB1-201ENST00000263121 PPYP01298 95 aa19.07■□□□□ 0.64
SMARCB1-201ENST00000263121 PGAM2P15259 253 aa19.07■□□□□ 0.64
SMARCB1-201ENST00000263121 ZBTB25P24278 435 aa19.07■□□□□ 0.64
SMARCB1-201ENST00000263121 EDDM3AQ14507 147 aa19.07■□□□□ 0.64
SMARCB1-201ENST00000263121 MUC20Q8N307 709 aaPredicted RBP19.07■□□□□ 0.64
SMARCB1-201ENST00000263121 ZNF431Q8TF32 576 aaPredicted RBP19.07■□□□□ 0.64
SMARCB1-201ENST00000263121 TMEM230Q96A57 120 aa19.07■□□□□ 0.64
SMARCB1-201ENST00000263121 SPOCK3Q9BQ16 436 aa19.07■□□□□ 0.64
SMARCB1-201ENST00000263121 NCOR1P1Q9H4R4 102 aa19.07■□□□□ 0.64
SMARCB1-201ENST00000263121 KCNIP1Q9NZI2 227 aa19.07■□□□□ 0.64
SMARCB1-201ENST00000263121 SLC23A1Q9UHI7 598 aa19.07■□□□□ 0.64
SMARCB1-201ENST00000263121 DOPEY1Q5JWR5 2465 aa19.06■□□□□ 0.64
SMARCB1-201ENST00000263121 C12orf77C9JDV5 145 aa19.06■□□□□ 0.64
SMARCB1-201ENST00000263121 SULT1A3P0DMM9 295 aa19.06■□□□□ 0.64
SMARCB1-201ENST00000263121 SULT1A4P0DMN0 295 aa19.06■□□□□ 0.64
SMARCB1-201ENST00000263121 UCP3P55916 312 aa19.06■□□□□ 0.64
SMARCB1-201ENST00000263121 P2RX3P56373 397 aa19.06■□□□□ 0.64
SMARCB1-201ENST00000263121 UBE2MP61081 183 aaKnown RBP19.06■□□□□ 0.64
SMARCB1-201ENST00000263121 DHODHQ02127 395 aa19.06■□□□□ 0.64
SMARCB1-201ENST00000263121 DHRS2Q13268 280 aa19.06■□□□□ 0.64
SMARCB1-201ENST00000263121 PPP1R1AQ13522 171 aa19.06■□□□□ 0.64
SMARCB1-201ENST00000263121 C6orf183Q5T699 404 aa19.06■□□□□ 0.64
SMARCB1-201ENST00000263121 FAM216BQ8N7L0 139 aa19.06■□□□□ 0.64
SMARCB1-201ENST00000263121 OR11H7Q8NGC8 314 aa19.06■□□□□ 0.64
SMARCB1-201ENST00000263121 OR13A1Q8NGR1 328 aa19.06■□□□□ 0.64
SMARCB1-201ENST00000263121 UBTD1Q9HAC8 227 aa19.06■□□□□ 0.64
SMARCB1-201ENST00000263121 ODAMA1E959 279 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 NKX6-3A6NJ46 265 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 BOLA2-SMG1P6H3BVE0 249 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 CTSDP07339 412 aaPredicted RBP19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 HNRNPCP07910 306 aaKnown RBP eCLIP19.05■□□□□ 0.641e-6■□□□□ 9.1
SMARCB1-201ENST00000263121 ZNF728P0DKX0 622 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 PI3P19957 117 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 COL8A2P25067 703 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 ERP29P30040 261 aaKnown RBP19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 HERV-K104P61576 105 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 IL13RA1P78552 427 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 H1FOOQ8IZA3 346 aaPredicted RBP19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 LURAP1Q96LR2 239 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 LAMP3Q9UQV4 416 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 A8MV72 311 aaPredicted RBP19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 AKR1C4P17516 323 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 FXYD4P59646 89 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 CR1LQ2VPA4 569 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 TMEM128Q5BJH2 165 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 LYG2Q86SG7 212 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 OR10J5Q8NHC4 309 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 ZFAND1Q8TCF1 268 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 MRGPRDQ8TDS7 321 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 NEU4Q8WWR8 484 aaPredicted RBP19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 TOMM40LQ969M1 308 aa19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 C14orf166Q9Y224 244 aaKnown RBP19.05■□□□□ 0.64
SMARCB1-201ENST00000263121 C9orf170A2RU37 121 aa19.04■□□□□ 0.64
SMARCB1-201ENST00000263121 RP2O75695 350 aa19.04■□□□□ 0.64
SMARCB1-201ENST00000263121 FSTL3O95633 263 aa19.04■□□□□ 0.64
SMARCB1-201ENST00000263121 HLA-AP01891 365 aaKnown RBP19.04■□□□□ 0.64
SMARCB1-201ENST00000263121 TRAT1Q6PIZ9 186 aa19.04■□□□□ 0.64
SMARCB1-201ENST00000263121 PRR18Q8N4B5 295 aa19.04■□□□□ 0.64
SMARCB1-201ENST00000263121 IL1F10Q8WWZ1 152 aa19.04■□□□□ 0.64
SMARCB1-201ENST00000263121 OR1A1Q9P1Q5 309 aa19.04■□□□□ 0.64
SMARCB1-201ENST00000263121 RALYQ9UKM9 306 aaKnown RBP19.04■□□□□ 0.64
SMARCB1-201ENST00000263121 FAM172BPA6NC97 362 aa19.03■□□□□ 0.64
SMARCB1-201ENST00000263121 LYNX1G3V0Z9 82 aa19.03■□□□□ 0.64
SMARCB1-201ENST00000263121 LYNX1P0DP58 116 aa19.03■□□□□ 0.64
SMARCB1-201ENST00000263121 CXCL3P19876 107 aa19.03■□□□□ 0.64
SMARCB1-201ENST00000263121 MRPS11P82912 194 aaKnown RBP19.03■□□□□ 0.64
SMARCB1-201ENST00000263121 CD83Q01151 205 aa19.03■□□□□ 0.64
SMARCB1-201ENST00000263121 OR1L1Q8NH94 360 aa19.03■□□□□ 0.64
SMARCB1-201ENST00000263121 UBALD1Q8TB05 177 aa19.03■□□□□ 0.64
SMARCB1-201ENST00000263121 DCTN5Q9BTE1 182 aa19.03■□□□□ 0.64
SMARCB1-201ENST00000263121 RANGRFQ9HD47 186 aaPredicted RBP19.03■□□□□ 0.64
SMARCB1-201ENST00000263121 DLL4Q9NR61 685 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms