RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 STUMQ69YW2 141 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 ABHD14AQ9BUJ0 271 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 AKIRIN1Q9H9L7 192 aaPredicted RBP7.34□□□□□ -1.23
LDB3-201ENST00000263066 KIF26BQ2KJY2 2108 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 PLXNA3P51805 1871 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 MEGF11A6BM72 1044 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 PDE6DO43924 150 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 ONECUT2O95948 504 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 PPBPP02775 128 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 GAPDHP04406 335 aaKnown RBP7.34□□□□□ -1.23
LDB3-201ENST00000263066 OR10J4P0C629 311 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 ADRA2CP18825 462 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 HIST1H1TP22492 207 aaPredicted RBP7.34□□□□□ -1.23
LDB3-201ENST00000263066 UCP1P25874 307 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 ATP6V0CP27449 155 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 CSNK1A1P48729 337 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 SUCLG1P53597 346 aaKnown RBP7.34□□□□□ -1.23
LDB3-201ENST00000263066 HERV-K104P61576 105 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 RUNX1Q01196 453 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 SGCBQ16585 318 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 CALHM1Q8IU99 346 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 SLC2A12Q8TD20 617 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 LHX4Q969G2 390 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 MS4A6EQ96DS6 147 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 SGCZQ96LD1 299 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 SPACA5Q96QH8 159 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 ZNF71Q9NQZ8 489 aaPredicted RBP7.34□□□□□ -1.23
LDB3-201ENST00000263066 RALYQ9UKM9 306 aaKnown RBP7.34□□□□□ -1.23
LDB3-201ENST00000263066 KLK13Q9UKR3 277 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 TRAV39A0A0B4J263 110 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 MDFIC2A0A1B0GVS7 189 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 A0A1B0GW15 77 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 E9PQ18 207 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 SAP30O75446 220 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 MELTFP08582 738 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 PGCP20142 388 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 P2RY1P47900 373 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 NANOS3P60323 173 aaKnown RBP7.34□□□□□ -1.23
LDB3-201ENST00000263066 TRA2BP62995 288 aaKnown RBP7.34□□□□□ -1.23
LDB3-201ENST00000263066 Q56UQ5 140 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 RTN4IP1Q8WWV3 396 aaPredicted RBP7.34□□□□□ -1.23
LDB3-201ENST00000263066 ASB10Q8WXI3 467 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 ZNF160Q9HCG1 818 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.34□□□□□ -1.23
LDB3-201ENST00000263066 ZNF835Q9Y2P0 537 aa7.34□□□□□ -1.23
LDB3-201ENST00000263066 A8MVM7 634 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 C11orf98E9PRG8 122 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 H3BP45 60 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 NUDT3O95989 172 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 CHRM2P08172 466 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 UQCRFS1P47985 274 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 BAXQ07812 192 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 PLAC9Q5JTB6 97 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 FFAR4Q5NUL3 377 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 ANKRD9Q96BM1 317 aaPredicted RBP7.33□□□□□ -1.24
LDB3-201ENST00000263066 SIGMAR1Q99720 223 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 SMDT1Q9H4I9 107 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 BANF2Q9H503 90 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 RALGAPA1Q6GYQ0 2036 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 ZNF816-ZNF321PA0A0X1KG74 233 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 K7EP13 123 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 CORTO00230 105 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 FCN1O00602 326 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 ANGPTL7O43827 346 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 SSSCA1O60232 199 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 HSPB1P04792 205 aaKnown RBP7.33□□□□□ -1.24
LDB3-201ENST00000263066 KITLGP21583 273 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 CEACAM3P40198 252 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 PSMB3P49720 205 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 SOX8P57073 446 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 FOXK1P85037 733 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 ZXDCQ2QGD7 858 aaPredicted RBP7.33□□□□□ -1.24
LDB3-201ENST00000263066 OR2AJ1Q8NGZ0 328 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 TMEM14AQ9Y6G1 99 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 KCNE3Q9Y6H6 103 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 DOPEY2Q9Y3R5 2298 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 TRAV26-1A0A087WT03 109 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 IGHV1OR21-1A0A087WYE8 117 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 H3BML4 177 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 CTXN1P60606 82 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 PAFAH1B2P68402 229 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 ANKRD55Q3KP44 614 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 CARD17Q5XLA6 110 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 OR5C1Q8NGR4 320 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 NANOS1Q8WY41 292 aaKnown RBP7.33□□□□□ -1.24
LDB3-201ENST00000263066 GNPNAT1Q96EK6 184 aaPredicted RBP7.33□□□□□ -1.24
LDB3-201ENST00000263066 C1orf198Q9H425 327 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 ZNF665Q9H7R5 613 aa7.33□□□□□ -1.24
LDB3-201ENST00000263066 TRBV5-4A0A0C4DH59 114 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 PLPP1O14494 284 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 ZNF823P16415 610 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 CEBPDP49716 269 aaPredicted RBP7.32□□□□□ -1.24
LDB3-201ENST00000263066 DMRTC1Q5HYR2 192 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 OR51A2Q8NGJ7 313 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 MRPL24Q96A35 216 aaKnown RBP7.32□□□□□ -1.24
LDB3-201ENST00000263066 SLAMF6Q96DU3 332 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 GLIPR2Q9H4G4 154 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 MTHFD2LQ9H903 347 aaPredicted RBP7.32□□□□□ -1.24
LDB3-201ENST00000263066 NAT8Q9UHE5 227 aa7.32□□□□□ -1.24
LDB3-201ENST00000263066 ENTPD2Q9Y5L3 495 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms