RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 PKIAP61925 76 aa8.64□□□□□ -1.03
LIG3-201ENST00000262327 RPS23P62266 143 aaKnown RBP8.64□□□□□ -1.03
LIG3-201ENST00000262327 TNFRSF9Q07011 255 aa8.64□□□□□ -1.03
LIG3-201ENST00000262327 ZNF154Q13106 437 aa8.64□□□□□ -1.03
LIG3-201ENST00000262327 EIF3IQ13347 325 aaKnown RBP8.64□□□□□ -1.03
LIG3-201ENST00000262327 PDZD11Q5EBL8 140 aa8.64□□□□□ -1.03
LIG3-201ENST00000262327 DCAF12Q5T6F0 453 aa8.64□□□□□ -1.03
LIG3-201ENST00000262327 LHFPL2Q6ZUX7 228 aa8.64□□□□□ -1.03
LIG3-201ENST00000262327 C17orf78Q8N4C9 275 aa8.64□□□□□ -1.03
LIG3-201ENST00000262327 IMMP1LQ96LU5 166 aa8.64□□□□□ -1.03
LIG3-201ENST00000262327 DDA1Q9BW61 102 aa8.64□□□□□ -1.03
LIG3-201ENST00000262327 LOXL2Q9Y4K0 774 aa8.64□□□□□ -1.03
LIG3-201ENST00000262327 IGHV3-64DA0A0J9YX35 117 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 TSTD3H0UI37 97 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 K7N7A8 449 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 OTX2P32243 289 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 GPM6AP51674 278 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 RBM11P57052 281 aaKnown RBP8.63□□□□□ -1.03
LIG3-201ENST00000262327 FOXL2NBQ6ZUU3 175 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 CPEB3Q8NE35 698 aaKnown RBP8.63□□□□□ -1.03
LIG3-201ENST00000262327 OR4D5Q8NGN0 318 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 SVIPQ8NHG7 77 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 EXTL1Q92935 676 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 TAAR9Q96RI9 348 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 OR2H1Q9GZK4 316 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 CCL28Q9NRJ3 127 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 TTC28Q96AY4 2481 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 PROB1E7EW31 1015 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 SOX15O60248 233 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 MT-CO3P00414 261 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 IL13RA2Q14627 380 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 GPR157Q5UAW9 335 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 OR10D3Q8NH80 312 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 SIRT7Q9NRC8 400 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 GPR179Q6PRD1 2367 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 NCKAP5O14513 1909 aa8.63□□□□□ -1.03
LIG3-201ENST00000262327 ARHGAP21Q5T5U3 1957 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 hCG_38984A0A1B0GV85 526 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 C9J4A7 227 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 ZNF25P17030 456 aaPredicted RBP8.62□□□□□ -1.03
LIG3-201ENST00000262327 FUT3P21217 361 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 CLDN15P56746 228 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 RND3P61587 244 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 VAMP2P63027 116 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 FOXO1Q12778 655 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 MAJINQ3KP22 176 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 SPNS3Q6ZMD2 512 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 TMEM252Q8N6L7 170 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 OR56B2PQ8NGI1 322 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 OR10D4PQ8NGN7 298 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 OR1J1Q8NGS3 322 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 PBDC1Q9BVG4 233 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 GPR61Q9BZJ8 451 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 CACNA1DQ01668 2161 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 A0A087WZY1 265 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 TRDCB7Z8K6 153 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 HS3ST1O14792 307 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 CBR3O75828 277 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 HLA-HP01893 362 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 TAGLN2P37802 199 aaKnown RBP8.62□□□□□ -1.03
LIG3-201ENST00000262327 FUT6P51993 359 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 HMGN3Q15651 99 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 TRIP6Q15654 476 aaKnown RBP8.62□□□□□ -1.03
LIG3-201ENST00000262327 VASH2Q86V25 355 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 CYB561D1Q8N8Q1 229 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 CCDC71LQ8N9Z2 235 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 OR51H1Q8NH63 302 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 FGF23Q9GZV9 251 aaPredicted RBP8.62□□□□□ -1.03
LIG3-201ENST00000262327 GAR1Q9NY12 217 aaKnown RBP8.62□□□□□ -1.03
LIG3-201ENST00000262327 OR6C6A6NF89 314 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 RBFOX3A6NFN3 312 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 ZNF716A6NP11 495 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 H3BQ15 152 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 CHST1O43916 411 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 CST2P09228 141 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 HOXA5P20719 270 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 NDUFA6P56556 154 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 RAC3P60763 192 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 TMEM267Q0VDI3 215 aaPredicted RBP8.62□□□□□ -1.03
LIG3-201ENST00000262327 HERPUD1Q15011 391 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 SPSB3Q6PJ21 355 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 ODF3L1Q8IXM7 274 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 C10orf35Q96D05 121 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 RAB39BQ96DA2 213 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 TMEM222Q9H0R3 208 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 TMED3Q9Y3Q3 217 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 LOC400499M0QZD8 3231 aa8.62□□□□□ -1.03
LIG3-201ENST00000262327 A0A0G2JRQ6 117 aa8.61□□□□□ -1.03
LIG3-201ENST00000262327 PINLYPA6NC86 204 aa8.61□□□□□ -1.03
LIG3-201ENST00000262327 CXCL1P09341 107 aa8.61□□□□□ -1.03
LIG3-201ENST00000262327 B3GALT5-AS1P59052 145 aa8.61□□□□□ -1.03
LIG3-201ENST00000262327 KIAA0141Q14154 515 aaPredicted RBP8.61□□□□□ -1.03
LIG3-201ENST00000262327 GGNQ86UU5 652 aa8.61□□□□□ -1.03
LIG3-201ENST00000262327 SELENOHQ8IZQ5 122 aaKnown RBP8.61□□□□□ -1.03
LIG3-201ENST00000262327 LRTM2Q8N967 370 aa8.61□□□□□ -1.03
LIG3-201ENST00000262327 RDH5Q92781 318 aa8.61□□□□□ -1.03
LIG3-201ENST00000262327 DEPPQ9NTK1 212 aa8.61□□□□□ -1.03
LIG3-201ENST00000262327 ZNF816-ZNF321PA0A0X1KG74 233 aa8.61□□□□□ -1.03
LIG3-201ENST00000262327 P04436 131 aa8.61□□□□□ -1.03
LIG3-201ENST00000262327 MDKP21741 143 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms