RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 RNF7Q9UBF6 113 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 PAM16Q9Y3D7 125 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 SNURFLB1AK76 121 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 PTP4A1Q93096 173 aa12.57□□□□□ -0.4
CUX2-201ENST00000261726 ARFGEF1Q9Y6D6 1849 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 KIR3DL2P43630 455 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 HIKESHIQ53FT3 197 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 VN1R17PQ8TDU5 208 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 RGP1Q92546 391 aaPredicted RBP12.56□□□□□ -0.4
CUX2-201ENST00000261726 MRGPRFQ96AM1 343 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 MBPP02686 304 aaPredicted RBP12.56□□□□□ -0.4
CUX2-201ENST00000261726 ZNF25P17030 456 aaPredicted RBP12.56□□□□□ -0.4
CUX2-201ENST00000261726 GFRA1P56159 465 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 CLEC18BQ6UXF7 455 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 LHX9Q9NQ69 397 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 ASPDHA6ND91 283 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 CGB1A6NKQ9 187 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 LINC01555Q8NAE3 123 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 FAHD2AQ96GK7 314 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 HEXA-AS1Q9H8Q6 139 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 FOCADQ5VW36 1801 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 ANKRD20A5PA0PJZ0 165 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 GABRA6Q16445 453 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 ASCL5Q7RTU5 278 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 ADAT3Q96EY9 351 aaPredicted RBP12.56□□□□□ -0.4
CUX2-201ENST00000261726 RSG1Q9BU20 258 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 SLIRPQ9GZT3 109 aaKnown RBP12.56□□□□□ -0.4
CUX2-201ENST00000261726 SMCHD1A6NHR9 2005 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 MMDQ15546 238 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 NUBPLQ8TB37 319 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 SLC25A33Q9BSK2 321 aa12.56□□□□□ -0.4
CUX2-201ENST00000261726 FXYD1O00168 92 aa12.55□□□□□ -0.4
CUX2-201ENST00000261726 CTSDP07339 412 aaPredicted RBP12.55□□□□□ -0.4
CUX2-201ENST00000261726 CD226Q15762 336 aa12.55□□□□□ -0.4
CUX2-201ENST00000261726 PRSS8Q16651 343 aa12.55□□□□□ -0.4
CUX2-201ENST00000261726 PIGYQ3MUY2 71 aa12.55□□□□□ -0.4
CUX2-201ENST00000261726 AMMECR1LQ6DCA0 310 aa12.55□□□□□ -0.4
CUX2-201ENST00000261726 ANXA10Q9UJ72 324 aa12.55□□□□□ -0.4
CUX2-201ENST00000261726 RTN4RQ9BZR6 473 aa12.55□□□□□ -0.4
CUX2-201ENST00000261726 ISLRO14498 428 aa12.55□□□□□ -0.4
CUX2-201ENST00000261726 RAB29O14966 203 aa12.55□□□□□ -0.4
CUX2-201ENST00000261726 UQCRFS1P47985 274 aa12.55□□□□□ -0.4
CUX2-201ENST00000261726 TMEM92Q6UXU6 159 aa12.55□□□□□ -0.4
CUX2-201ENST00000261726 VAX2Q9UIW0 290 aa12.55□□□□□ -0.4
CUX2-201ENST00000261726 ELOA3CA0A087WX78 387 aaPredicted RBP12.54□□□□□ -0.4
CUX2-201ENST00000261726 AESQ08117 197 aa12.54□□□□□ -0.4
CUX2-201ENST00000261726 NSUN5P2Q63ZY6 315 aa12.54□□□□□ -0.4
CUX2-201ENST00000261726 DEGS2Q6QHC5 323 aa12.54□□□□□ -0.4
CUX2-201ENST00000261726 MS4A7Q9GZW8 240 aaPredicted RBP12.54□□□□□ -0.4
CUX2-201ENST00000261726 FAM181BA6NEQ2 426 aa12.54□□□□□ -0.4
CUX2-201ENST00000261726 RPLP1P05386 114 aaKnown RBP12.54□□□□□ -0.4
CUX2-201ENST00000261726 PNRC1Q12796 327 aaPredicted RBP12.54□□□□□ -0.4
CUX2-201ENST00000261726 SLC35E3Q7Z769 313 aa12.54□□□□□ -0.4
CUX2-201ENST00000261726 OR6X1Q8NH79 312 aa12.54□□□□□ -0.4
CUX2-201ENST00000261726 SLC52A3Q9NQ40 469 aa12.54□□□□□ -0.4
CUX2-201ENST00000261726 MEOX2P50222 304 aa12.54□□□□□ -0.4
CUX2-201ENST00000261726 IGHV1OR15-9A0A0B4J2B8 117 aa12.54□□□□□ -0.4
CUX2-201ENST00000261726 FGF9P31371 208 aaPredicted RBP12.54□□□□□ -0.4
CUX2-201ENST00000261726 ANGPTL4Q9BY76 406 aa12.54□□□□□ -0.4
CUX2-201ENST00000261726 CA10Q9NS85 328 aa12.54□□□□□ -0.4
CUX2-201ENST00000261726 MRM2Q9UI43 246 aaKnown RBP12.54□□□□□ -0.4
CUX2-201ENST00000261726 TCRBV16S1A1N1A0A5B0 115 aa12.54□□□□□ -0.4
CUX2-201ENST00000261726 RPL34P49207 117 aaKnown RBP12.54□□□□□ -0.4
CUX2-201ENST00000261726 LGALSLQ3ZCW2 172 aaPredicted RBP12.54□□□□□ -0.4
CUX2-201ENST00000261726 ZNF383Q8NA42 475 aa12.54□□□□□ -0.4
CUX2-201ENST00000261726 SLC25A40Q8TBP6 338 aa12.54□□□□□ -0.4
CUX2-201ENST00000261726 PRNDQ9UKY0 176 aa12.54□□□□□ -0.4
CUX2-201ENST00000261726 OR51B2Q9Y5P1 312 aa12.54□□□□□ -0.4
CUX2-201ENST00000261726 COL9A1P20849 921 aa12.54□□□□□ -0.4
CUX2-201ENST00000261726 HIGD1AQ9Y241 93 aa12.54□□□□□ -0.4
CUX2-201ENST00000261726 CA2P00918 260 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 PSG2P11465 335 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 EPHA8P29322 1005 aaPredicted RBP12.53□□□□□ -0.4
CUX2-201ENST00000261726 CBLN2Q8IUK8 224 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 TBX21Q9UL17 535 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 NTN1O95631 604 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 CXorf1O96002 111 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 ADAD2Q8NCV1 583 aaKnown RBP12.53□□□□□ -0.4
CUX2-201ENST00000261726 MRPL24Q96A35 216 aaKnown RBP12.53□□□□□ -0.4
CUX2-201ENST00000261726 PARP11Q9NR21 331 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 NTMQ9P121 344 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 CLN8Q9UBY8 286 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 CDC42EP2O14613 210 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 PDE6DO43924 150 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 RAC3P60763 192 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 APOBEC4Q8WW27 367 aaKnown RBP12.53□□□□□ -0.4
CUX2-201ENST00000261726 GLRX2Q9NS18 164 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 PRRC2BQ5JSZ5 2229 aaKnown RBP12.53□□□□□ -0.4
CUX2-201ENST00000261726 FAHD2BQ6P2I3 314 aaPredicted RBP12.53□□□□□ -0.4
CUX2-201ENST00000261726 PET117Q6UWS5 81 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 HILPDAQ9Y5L2 63 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 LOC107984156A0A0G2JMH3 177 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 NKX2-6A6NCS4 301 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 TNFSF14O43557 240 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 RELBQ01201 579 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 HERPUD1Q15011 391 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 ARL17AQ8IVW1 177 aa12.53□□□□□ -0.4
CUX2-201ENST00000261726 EVPLQ92817 2033 aa12.52□□□□□ -0.4
CUX2-201ENST00000261726 OR10J1P30954 320 aa12.52□□□□□ -0.4
CUX2-201ENST00000261726 SLC35B1P78383 322 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms