RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 PAGE4O60829 102 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 ZNF137PP52743 207 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 DLK1P80370 383 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 LSMEM1Q8N8F7 131 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 SMRP1Q8NCR6 262 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 KLK13Q9UKR3 277 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 NPY1RP25929 384 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 RNFT1Q5M7Z0 435 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 ASCL5Q7RTU5 278 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 SLC16A13Q7RTY0 426 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 DOLPP1Q86YN1 238 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 ZNF426Q9BUY5 554 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 RNF122Q9H9V4 155 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 CES1P1Q9UKY3 287 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 OR51B2Q9Y5P1 312 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 RPL36A-HNRNPH2H7BZ11 118 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 SEMA7AO75326 666 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 RPL29P47914 159 aaKnown RBP10.57□□□□□ -0.72
COL8A1-201ENST00000261037 P2RX4Q99571 388 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 NRXN2Q9P2S2 1712 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 ATAD5Q96QE3 1844 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 MFNGO00587 321 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 FOXS1O43638 330 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 SULT1A1P50225 295 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 PPOXP50336 477 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 BSXQ3C1V8 233 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 LRRC3BQ96PB8 259 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 MRPL37Q9BZE1 423 aaKnown RBP10.57□□□□□ -0.72
COL8A1-201ENST00000261037 DUSP15Q9H1R2 295 aaPredicted RBP10.57□□□□□ -0.72
COL8A1-201ENST00000261037 Q9N2K0 584 aa10.57□□□□□ -0.72
COL8A1-201ENST00000261037 A0A1W2PQF6 199 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 J3QT63 122 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 CTDSPLO15194 276 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 UPK3AO75631 287 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 MBPP02686 304 aaPredicted RBP10.56□□□□□ -0.72
COL8A1-201ENST00000261037 IGHV4-34P06331 123 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 ADRA2AP08913 450 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 VSIG8P0DPA2 414 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 WDR73Q6P4I2 378 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 RCC2Q9P258 522 aaKnown RBP10.56□□□□□ -0.72
COL8A1-201ENST00000261037 MESP2Q0VG99 397 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 C1orf185Q5T7R7 199 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 POM121Q96HA1 1249 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 GPA33Q99795 319 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 TRBV23-1A0A0A0MS06 115 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 C16orf97H3BN30 126 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 MMDQ15546 238 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 SLC22A18ASQ8N1D0 253 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 OR10G8Q8NGN5 311 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 Q8WTZ3 238 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 GMPPAQ96IJ6 420 aaPredicted RBP10.56□□□□□ -0.72
COL8A1-201ENST00000261037 CA10Q9NS85 328 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 OR2W1Q9Y3N9 320 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 HILPDAQ9Y5L2 63 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 TUBGCP6Q96RT7 1819 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 ATXN7O15265 892 aaPredicted RBP10.56□□□□□ -0.72
COL8A1-201ENST00000261037 PRSS23O95084 383 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 COL8A1P27658 744 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 TFPI2P48307 235 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 CCL8P80075 99 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 HLA-DRB5Q30154 266 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 FBXW9Q5XUX1 488 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 C16orf82Q7Z2V1 217 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 PRNTQ86SH4 94 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 SLC25A42Q86VD7 318 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 OR10C1Q96KK4 312 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 SEC11CQ9BY50 192 aa10.56□□□□□ -0.72
COL8A1-201ENST00000261037 IGHV3-72A0A0B4J1Y9 119 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 CRHP06850 196 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 ZNF841Q6ZN19 808 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 CBLN2Q8IUK8 224 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 CCL13Q99616 98 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 PRSS50Q9UI38 385 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 HSF4Q9ULV5 492 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 CCL27Q9Y4X3 112 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 SCN1AP35498 2009 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 HMSDA8MTL9 139 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 TMEM255AQ5JRV8 349 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 TCTEX1D1Q8N7M0 179 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 ANGPTL6Q8NI99 470 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 C5orf52A6NGY3 159 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 OR4C45A6NMZ5 311 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 SYNGR1O43759 233 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 ANKRD55Q3KP44 614 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 OR8I2Q8N0Y5 310 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 OR8A1Q8NGG7 326 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 PERPQ96FX8 193 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 ST6GAL2Q96JF0 529 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 HEXA-AS1Q9H8Q6 139 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 SBF2Q86WG5 1849 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 PLXNB2O15031 1838 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 FOCADQ5VW36 1801 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 LOC389332A0A1B0GUA5 103 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 C5orf67F2Z3F1 127 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 MOSPD3O75425 235 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 CLDN14O95500 239 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 CRISP2P16562 243 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 RCC1P18754 421 aaPredicted RBP10.55□□□□□ -0.72
COL8A1-201ENST00000261037 RAG2P55895 527 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 KHDC3LQ587J8 217 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms