RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 ABCA11PQ4W5N1 156 aa14.94□□□□□ -0.02
SSB-201ENST00000260956 OR2A2Q6IF42 318 aa14.94□□□□□ -0.02
SSB-201ENST00000260956 FAM185AQ8N0U4 392 aa14.94□□□□□ -0.02
SSB-201ENST00000260956 STARD4Q96DR4 205 aa14.94□□□□□ -0.02
SSB-201ENST00000260956 USB1Q9BQ65 265 aaKnown RBP14.94□□□□□ -0.02
SSB-201ENST00000260956 C11orf1Q9H5F2 150 aa14.94□□□□□ -0.02
SSB-201ENST00000260956 AMDHD2Q9Y303 409 aa14.94□□□□□ -0.02
SSB-201ENST00000260956 ICE1Q9Y2F5 2266 aa14.94□□□□□ -0.02
SSB-201ENST00000260956 PRR14LQ5THK1 2151 aa14.94□□□□□ -0.02
SSB-201ENST00000260956 SETXQ7Z333 2677 aaKnown RBP14.93□□□□□ -0.02
SSB-201ENST00000260956 DCHS2Q6V1P9 2916 aa14.93□□□□□ -0.02
SSB-201ENST00000260956 NBPF19A0A087WUL8 3843 aa14.93□□□□□ -0.02
SSB-201ENST00000260956 CASP6P55212 293 aa14.93□□□□□ -0.02
SSB-201ENST00000260956 ZNF154Q13106 437 aa14.93□□□□□ -0.02
SSB-201ENST00000260956 LYZL2Q7Z4W2 148 aa14.93□□□□□ -0.02
SSB-201ENST00000260956 CNEP1R1Q8N9A8 125 aa14.93□□□□□ -0.02
SSB-201ENST00000260956 LRRC20Q8TCA0 184 aa14.93□□□□□ -0.02
SSB-201ENST00000260956 ITLN2Q8WWU7 325 aaPredicted RBP14.93□□□□□ -0.02
SSB-201ENST00000260956 ADAT1Q9BUB4 502 aaKnown RBP14.93□□□□□ -0.02
SSB-201ENST00000260956 HES4Q9HCC6 221 aa14.93□□□□□ -0.02
SSB-201ENST00000260956 PFDN2Q9UHV9 154 aa14.93□□□□□ -0.02
SSB-201ENST00000260956 KCNIP3Q9Y2W7 256 aa14.93□□□□□ -0.02
SSB-201ENST00000260956 MPPED1O15442 326 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 MLNRO43193 412 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 WDR1O75083 606 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 HLA-DRB3P79483 266 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 C1orf185Q5T7R7 199 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 UNQ6126/PRO20091Q6UXV3 157 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 BAP18Q8IXM2 172 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 CCDC71LQ8N9Z2 235 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 KLF14Q8TD94 323 aaPredicted RBP14.92□□□□□ -0.02
SSB-201ENST00000260956 TMEM56Q96MV1 263 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 NARFLQ9H6Q4 476 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 TREM2Q9NZC2 230 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 GSKIPQ9P0R6 139 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 TMEM56-RWDD3S4R434 201 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 HSPB6O14558 160 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 IFNA21P01568 189 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 MBPP02686 304 aaPredicted RBP14.92□□□□□ -0.02
SSB-201ENST00000260956 WNT2P09544 360 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 CECR9P0C854 216 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 TPT1P13693 172 aaKnown RBP14.92□□□□□ -0.02
SSB-201ENST00000260956 ZNF146Q15072 292 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 C11orf53Q8IXP5 236 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 Q8IYB0 196 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 LGI3Q8N145 548 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 OR1J1Q8NGS3 322 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 SYT3Q9BQG1 590 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 TMEM222Q9H0R3 208 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 TLNRD1Q9H1K6 362 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 ZDHHC8Q9ULC8 765 aa14.92□□□□□ -0.02
SSB-201ENST00000260956 TMEM210A6NLX4 147 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 TEX46H3BTG2 121 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 K7EPK0 472 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 SLC33A1O00400 549 aaPredicted RBP14.91□□□□□ -0.02
SSB-201ENST00000260956 CRYZL1O95825 349 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 TK1P04183 234 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 CTXN2P0C2S0 81 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 FAM157CP0CG43 387 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 SELEP16581 610 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 KITLGP21583 273 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 S100A10P60903 97 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 TMEM268Q5VZI3 342 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 ZNF818PQ6ZRF7 136 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 CXorf67Q86X51 503 aaPredicted RBP14.91□□□□□ -0.02
SSB-201ENST00000260956 H1FOOQ8IZA3 346 aaPredicted RBP14.91□□□□□ -0.02
SSB-201ENST00000260956 FAM71E2Q8N5Q1 922 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 FAM169BQ8N8A8 192 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 OR4D5Q8NGN0 318 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 OR4A4PQ8NGN8 299 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 PLPPR1Q8TBJ4 325 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 OBP2BQ9NPH6 170 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 NUP50Q9UKX7 468 aa14.91□□□□□ -0.02
SSB-201ENST00000260956 A0A0G2JNJ9 132 aa14.9□□□□□ -0.02
SSB-201ENST00000260956 H0YL77 283 aa14.9□□□□□ -0.02
SSB-201ENST00000260956 ZNF497Q6ZNH5 498 aa14.9□□□□□ -0.02
SSB-201ENST00000260956 ZNF610Q8N9Z0 462 aa14.9□□□□□ -0.02
SSB-201ENST00000260956 LILRB1Q8NHL6 650 aaPredicted RBP14.9□□□□□ -0.02
SSB-201ENST00000260956 RDH5Q92781 318 aa14.9□□□□□ -0.02
SSB-201ENST00000260956 PSMG3-AS1Q96PY0 264 aa14.9□□□□□ -0.02
SSB-201ENST00000260956 Q9UFV3 132 aa14.9□□□□□ -0.02
SSB-201ENST00000260956 PURGQ9UJV8 347 aaKnown RBP14.9□□□□□ -0.02
SSB-201ENST00000260956 POLDIP2Q9Y2S7 368 aa14.9□□□□□ -0.02
SSB-201ENST00000260956 C3orf85A0A1B0GTC6 90 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 GPR31O00270 319 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 DIRAS3O95661 229 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 CLDN1O95832 211 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 OR2H2O95918 312 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 RCC1P18754 421 aaPredicted RBP14.89□□□□□ -0.03
SSB-201ENST00000260956 Q6ZR03 302 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 MRGPRGQ86SM5 289 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 TBC1D26Q86UD7 250 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 SLC35G3Q8N808 338 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 OPN3Q9H1Y3 402 aaPredicted RBP14.89□□□□□ -0.03
SSB-201ENST00000260956 PCDHB10Q9UN67 800 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 TMED3Q9Y3Q3 217 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 ARID1AO14497 2285 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 IGHV2OR16-5A0A0B4J2B6 119 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 IGHV1-18A0A0C4DH31 117 aa14.89□□□□□ -0.03
SSB-201ENST00000260956 KRBOX1C9JBD0 128 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms