RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 DUX4Q9UBX2 424 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 SESN1Q9Y6P5 492 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 NKX6-3A6NJ46 265 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 FCN3O75636 299 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 TFF1P04155 84 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 RLN1P04808 185 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 VSIG10L2P0DP72 767 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 KISS1Q15726 138 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 RAB11BQ15907 218 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 RNF144BQ7Z419 303 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 GAFA1Q96PS6 74 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 OPN4Q9UHM6 478 aa13.9□□□□□ -0.18
SDCBP-201ENST00000260130 RFPL4AA6NLU0 287 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 RFPL4AL1F8VTS6 287 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 F8VVB4 439 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 F8VWA3 439 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 SPRY1O43609 319 aaPredicted RBP13.89□□□□□ -0.19
SDCBP-201ENST00000260130 NDUFB3O43676 98 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 B3GALNT1O75752 331 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 SCO1O75880 301 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 AVPP01185 164 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 GTF2F2P13984 249 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 IL13RA1P78552 427 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 BTNL3Q6UXE8 466 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 OR51D1Q8NGF3 324 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 OR51A2Q8NGJ7 313 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 OR52B4Q8NGK2 314 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 IGHV2-70DA0A0C4DH43 119 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 KIR2DS1A0A191URI9 304 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 SIGLEC5O15389 551 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 FAM157CP0CG43 387 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 PRSS3P35030 304 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 PLA2G7Q13093 441 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 LRRC10Q5BKY1 277 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 CRIP3Q6Q6R5 217 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 C1orf229Q6ZS94 237 aaPredicted RBP13.89□□□□□ -0.19
SDCBP-201ENST00000260130 TMUB2Q71RG4 321 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 Q8IYB0 196 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 OR2AK2Q8NG84 335 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 ST8SIA4Q92187 359 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 ARHGAP32A7KAX9 2087 aa13.89□□□□□ -0.19
SDCBP-201ENST00000260130 TRAV18A0A075B6X5 111 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 C22orf46C9J442 243 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 SLC17A2O00624 439 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 GPR37O15354 613 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 SRD5A1P18405 259 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 ZP3P21754 424 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 PRDX2P32119 198 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 ACTBP60709 375 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 ACTG1P63261 375 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 TAGLNQ01995 201 aaKnown RBP13.88□□□□□ -0.19
SDCBP-201ENST00000260130 PAX8Q06710 450 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 CD177Q8N6Q3 437 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 OR5D18Q8NGL1 313 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 SCARB1Q8WTV0 552 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 FAM3DQ96BQ1 224 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 CPNE2Q96FN4 548 aaPredicted RBP13.88□□□□□ -0.19
SDCBP-201ENST00000260130 SDSLQ96GA7 329 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 POM121Q96HA1 1249 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 NUDT16L1Q9BRJ7 211 aaKnown RBP13.88□□□□□ -0.19
SDCBP-201ENST00000260130 SDHAF2Q9NX18 166 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 ARPC5O15511 151 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 ANGPTL7O43827 346 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 KNG1P01042 644 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 SELLP14151 372 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 IGFBP3P17936 291 aaPredicted RBP13.88□□□□□ -0.19
SDCBP-201ENST00000260130 SRP14P37108 136 aaKnown RBP13.88□□□□□ -0.19
SDCBP-201ENST00000260130 NPBWR2P48146 333 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 C2orf76Q3KRA6 126 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 FGFRL1Q8N441 504 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 TEX29Q8N6K0 151 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 ZNRF1Q8ND25 227 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 TNFAIP8L1Q8WVP5 186 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 PPA2Q9H2U2 334 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 TMEM138Q9NPI0 162 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 CKLFQ9UBR5 152 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 C2CD3Q4AC94 2353 aa13.88□□□□□ -0.19
SDCBP-201ENST00000260130 SULT1C2O00338 296 aa13.87□□□□□ -0.19
SDCBP-201ENST00000260130 GOSR2O14653 212 aa13.87□□□□□ -0.19
SDCBP-201ENST00000260130 ENSAO43768 121 aaKnown RBP13.87□□□□□ -0.19
SDCBP-201ENST00000260130 BCL3P20749 454 aa13.87□□□□□ -0.19
SDCBP-201ENST00000260130 EFNB2P52799 333 aa13.87□□□□□ -0.19
SDCBP-201ENST00000260130 SAXO1Q8IYX7 474 aa13.87□□□□□ -0.19
SDCBP-201ENST00000260130 ZSCAN4Q8NAM6 433 aaPredicted RBP13.87□□□□□ -0.19
SDCBP-201ENST00000260130 OR52N4Q8NGI2 321 aa13.87□□□□□ -0.19
SDCBP-201ENST00000260130 OR51S1Q8NGJ8 323 aa13.87□□□□□ -0.19
SDCBP-201ENST00000260130 CCDC107Q8WV48 283 aa13.87□□□□□ -0.19
SDCBP-201ENST00000260130 EMG1Q92979 244 aaKnown RBP13.87□□□□□ -0.19
SDCBP-201ENST00000260130 SLC25A10Q9UBX3 287 aaPredicted RBP13.87□□□□□ -0.19
SDCBP-201ENST00000260130 OR14J1Q9UGF5 321 aa13.87□□□□□ -0.19
SDCBP-201ENST00000260130 PFDN2Q9UHV9 154 aa13.87□□□□□ -0.19
SDCBP-201ENST00000260130 IGKV1-12A0A0C4DH73 117 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 MFSD2BA6NFX1 497 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 IGKV1D-12P01611 117 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 LIPFP07098 398 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 TMEM225BP0DP42 221 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 H2BFSP57053 126 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 GLT8D1Q68CQ7 371 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 STEAP1BQ6NZ63 245 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 FAM58AQ8N1B3 248 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms