RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 RIPK1Q13546 671 aa15.08■□□□□ 0
TM6SF1-201ENST00000258909 NHLRC3Q5JS37 347 aa15.08■□□□□ 0
TM6SF1-201ENST00000258909 NOL4LQ96MY1 436 aaPredicted RBP15.08■□□□□ 0
TM6SF1-201ENST00000258909 LINC00527Q9UJ94 153 aa15.08■□□□□ 0
TM6SF1-201ENST00000258909 EXOSC1Q9Y3B2 195 aaKnown RBP15.08■□□□□ 0
TM6SF1-201ENST00000258909 TRAV8-7A0A075B6U6 113 aa15.07■□□□□ 0
TM6SF1-201ENST00000258909 TRBV5-5A0A0J9YX44 114 aa15.07■□□□□ 0
TM6SF1-201ENST00000258909 PNMA8CA0A1B0GUJ8 204 aa15.07■□□□□ 0
TM6SF1-201ENST00000258909 TMEM30CPA0ZSE6 113 aa15.07■□□□□ 0
TM6SF1-201ENST00000258909 PSMB11A5LHX3 300 aa15.07■□□□□ 0
TM6SF1-201ENST00000258909 IGFBP3P17936 291 aaPredicted RBP15.07■□□□□ 0
TM6SF1-201ENST00000258909 RAB7AP51149 207 aa15.07■□□□□ 0
TM6SF1-201ENST00000258909 RPS11P62280 158 aaKnown RBP eCLIP15.07■□□□□ 0
TM6SF1-201ENST00000258909 DMKNQ6E0U4 476 aaPredicted RBP15.07■□□□□ 0
TM6SF1-201ENST00000258909 C5orf56Q8N8D9 126 aa15.07■□□□□ 0
TM6SF1-201ENST00000258909 OR10A7Q8NGE5 316 aa15.07■□□□□ 0
TM6SF1-201ENST00000258909 NEK7Q8TDX7 302 aa15.07■□□□□ 0
TM6SF1-201ENST00000258909 ARL11Q969Q4 196 aa15.07■□□□□ 0
TM6SF1-201ENST00000258909 TMEM80Q96HE8 168 aa15.07■□□□□ 0
TM6SF1-201ENST00000258909 IFT22Q9H7X7 185 aa15.07■□□□□ 0
TM6SF1-201ENST00000258909 IGHV3-43A0A0B4J1X8 118 aa15.06■□□□□ 0
TM6SF1-201ENST00000258909 IGHV3-72A0A0B4J1Y9 119 aa15.06■□□□□ 0
TM6SF1-201ENST00000258909 IRGMA1A4Y4 181 aa15.06■□□□□ 0
TM6SF1-201ENST00000258909 C15orf65H3BRN8 121 aa15.06■□□□□ 0
TM6SF1-201ENST00000258909 HSD17B6O14756 317 aa15.06■□□□□ 0
TM6SF1-201ENST00000258909 IGHV3-43DP0DP04 118 aa15.06■□□□□ 0
TM6SF1-201ENST00000258909 GZMHP20718 246 aa15.06■□□□□ 0
TM6SF1-201ENST00000258909 MOB3BQ86TA1 216 aa15.06■□□□□ 0
TM6SF1-201ENST00000258909 SDCBPO00560 298 aaPredicted RBP15.05■□□□□ -0
TM6SF1-201ENST00000258909 MPIG6BO95866 241 aa15.05■□□□□ -0
TM6SF1-201ENST00000258909 Q499Y3 187 aa15.05■□□□□ -0
TM6SF1-201ENST00000258909 SLC16A12Q6ZSM3 486 aa15.05■□□□□ -0
TM6SF1-201ENST00000258909 OR8H3Q8N146 312 aa15.05■□□□□ -0
TM6SF1-201ENST00000258909 GGHQ92820 318 aa15.05■□□□□ -0
TM6SF1-201ENST00000258909 MUL1Q969V5 352 aa15.05■□□□□ -0
TM6SF1-201ENST00000258909 RBMXL1Q96E39 390 aaKnown RBP15.05■□□□□ -0
TM6SF1-201ENST00000258909 PGLYRP3Q96LB9 341 aa15.05■□□□□ -0
TM6SF1-201ENST00000258909 OR14A2Q96R54 314 aa15.05■□□□□ -0
TM6SF1-201ENST00000258909 PAK1IP1Q9NWT1 392 aaPredicted RBP15.05■□□□□ -0
TM6SF1-201ENST00000258909 CHCHD3Q9NX63 227 aaKnown RBP15.05■□□□□ -0
TM6SF1-201ENST00000258909 SERPINE3A8MV23 424 aa15.04■□□□□ -0
TM6SF1-201ENST00000258909 CCRL2O00421 344 aa15.04■□□□□ -0
TM6SF1-201ENST00000258909 MT-ND4P03905 459 aa15.04■□□□□ -0
TM6SF1-201ENST00000258909 GTF2F2P13984 249 aa15.04■□□□□ -0
TM6SF1-201ENST00000258909 SLC35A2P78381 396 aa15.04■□□□□ -0
TM6SF1-201ENST00000258909 ST3GAL4Q11206 333 aa15.04■□□□□ -0
TM6SF1-201ENST00000258909 MPV17LQ2QL34 196 aa15.04■□□□□ -0
TM6SF1-201ENST00000258909 TTC23Q5W5X9 447 aa15.04■□□□□ -0
TM6SF1-201ENST00000258909 C18orf65Q6ZTR6 163 aa15.04■□□□□ -0
TM6SF1-201ENST00000258909 LINC00596Q86U02 117 aa15.04■□□□□ -0
TM6SF1-201ENST00000258909 JAGN1Q8N5M9 183 aa15.04■□□□□ -0
TM6SF1-201ENST00000258909 ZNF485Q8NCK3 441 aa15.04■□□□□ -0
TM6SF1-201ENST00000258909 CYYR1Q96J86 154 aa15.04■□□□□ -0
TM6SF1-201ENST00000258909 CKLFQ9UBR5 152 aa15.04■□□□□ -0
TM6SF1-201ENST00000258909 MRPS28Q9Y2Q9 187 aaKnown RBP15.04■□□□□ -0
TM6SF1-201ENST00000258909 IGHV1-3A0A0C4DH29 117 aa15.03■□□□□ -0
TM6SF1-201ENST00000258909 LINC01548A6NM66 108 aa15.03■□□□□ -0
TM6SF1-201ENST00000258909 ZNF780AO75290 641 aaPredicted RBP15.03■□□□□ -0
TM6SF1-201ENST00000258909 GAPDHP04406 335 aaKnown RBP15.03■□□□□ -0
TM6SF1-201ENST00000258909 ADARB1P78563 741 aaKnown RBP15.03■□□□□ -0
TM6SF1-201ENST00000258909 YIF1BQ5BJH7 314 aa15.03■□□□□ -0
TM6SF1-201ENST00000258909 GLIPR1L1Q6UWM5 242 aa15.03■□□□□ -0
TM6SF1-201ENST00000258909 ZNF497Q6ZNH5 498 aa15.03■□□□□ -0
TM6SF1-201ENST00000258909 DHRSXQ8N5I4 330 aa15.03■□□□□ -0
TM6SF1-201ENST00000258909 GFOD1Q9NXC2 390 aa15.03■□□□□ -0
TM6SF1-201ENST00000258909 AIPO00170 330 aa15.02■□□□□ -0
TM6SF1-201ENST00000258909 FGF16O43320 207 aa15.02■□□□□ -0
TM6SF1-201ENST00000258909 GPX5O75715 221 aa15.02■□□□□ -0
TM6SF1-201ENST00000258909 MAS1P04201 325 aa15.02■□□□□ -0
TM6SF1-201ENST00000258909 ZNF816Q0VGE8 651 aaPredicted RBP15.02■□□□□ -0
TM6SF1-201ENST00000258909 MED21Q13503 144 aa15.02■□□□□ -0
TM6SF1-201ENST00000258909 DOC2BQ14184 412 aa15.02■□□□□ -0
TM6SF1-201ENST00000258909 SETD9Q8NE22 299 aa15.02■□□□□ -0
TM6SF1-201ENST00000258909 OR4K15Q8NH41 348 aa15.02■□□□□ -0
TM6SF1-201ENST00000258909 EAF1Q96JC9 268 aaPredicted RBP15.02■□□□□ -0
TM6SF1-201ENST00000258909 BANF2Q9H503 90 aa15.02■□□□□ -0
TM6SF1-201ENST00000258909 TRBV5-7A0A0A0MS05 114 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 NCBP2LA6PVI3 153 aaKnown RBP15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 SLC31A2O15432 143 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 GNAO1P09471 354 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 VHLP40337 213 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 KRTAP10-11P60412 298 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 LAIR2Q6ISS4 152 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 ETV3LQ6ZN32 361 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 SLC35E3Q7Z769 313 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 PRR18Q8N4B5 295 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 STX19Q8N4C7 294 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 LINC00482Q8N8I6 264 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 OR52M1Q8NGK5 317 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 CHPT1Q8WUD6 406 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 RCC1LQ96I51 464 aaKnown RBP15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 TRAPPC2LQ9UL33 140 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 COL7A1Q02388 2944 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 ZNF736B4DX44 427 aaPredicted RBP15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 C12orf77C9JDV5 145 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 MCRIP1C9JLW8 97 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 K7EIL1 84 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 ORC5O43913 435 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 FSTP19883 344 aa15.01□□□□□ -0.01
TM6SF1-201ENST00000258909 HOXD3P31249 432 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms