RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 BOD1Q96IK1 185 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 ADGRG7Q96K78 797 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 FAM210BQ96KR6 192 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 SNX22Q96L94 193 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 TMEM222Q9H0R3 208 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 SLC25A22Q9H936 323 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 HSF4Q9ULV5 492 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 LAMP3Q9UQV4 416 aa4.09□□□□□ -1.75
USP44-201ENST00000258499 PRRC2CQ9Y520 2896 aaKnown RBP4.09□□□□□ -1.76
USP44-201ENST00000258499 LTBP2Q14767 1821 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 DOCK10Q96BY6 2186 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 SHISA7A6NL88 538 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 PHOX2AO14813 284 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 NDUFA2O43678 99 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 SYNGR3O43761 229 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 IGHV3-13P01766 116 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 IGHV3-7P01780 117 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 TRGC2P03986 189 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 COX6A1P12074 109 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 SUCLG1P53597 346 aaKnown RBP4.09□□□□□ -1.76
USP44-201ENST00000258499 HLA-DRB3P79483 266 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 HGFACQ04756 655 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 KCNMB1Q16558 191 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 SLC25A53Q5H9E4 307 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 C6orf15Q6UXA7 325 aaPredicted RBP4.09□□□□□ -1.76
USP44-201ENST00000258499 ZNF573Q86YE8 665 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 GCNT2Q8N0V5 402 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 FAM58AQ8N1B3 248 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 NABP1Q96AH0 204 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 GALNT14Q96FL9 552 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 SF3B5Q9BWJ5 86 aaKnown RBP4.09□□□□□ -1.76
USP44-201ENST00000258499 HES7Q9BYE0 225 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 TUBD1Q9UJT1 453 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 LOXL2Q9Y4K0 774 aa4.09□□□□□ -1.76
USP44-201ENST00000258499 CACNA1HO95180 2353 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 LAMA1P25391 3075 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 TGIF2-C20orf24A0A0A6YYL0 155 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 IGKV1D-13A0A0B4J2D9 117 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 PQLC2LA1A4F0 135 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 TSTD3H0UI37 97 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 H7BYZ3 331 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 RPL36A-HNRNPH2H7BZ11 118 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 RRP8O43159 456 aaKnown RBP4.08□□□□□ -1.76
USP44-201ENST00000258499 CER1O95813 267 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 IGKV1-13P0DP09 117 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 HIKESHIQ53FT3 197 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 FADS6Q8N9I5 356 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 ZIC4Q8N9L1 334 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 OR4F5Q8NH21 305 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 SAP25Q8TEE9 199 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 NANOS1Q8WY41 292 aaKnown RBP4.08□□□□□ -1.76
USP44-201ENST00000258499 TMEM54Q969K7 222 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 MSI2Q96DH6 328 aaKnown RBP4.08□□□□□ -1.76
USP44-201ENST00000258499 OR4F4Q96R69 305 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 TWSG1Q9GZX9 223 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 GSN-AS1Q9NRJ2 163 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 ZNF391Q9UJN7 358 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 TCFL5Q9UL49 500 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 THADAQ6YHU6 1953 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 FER1L5A0AVI2 2057 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 MAP1LC3B2A6NCE7 125 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 BTBD17A6NE02 478 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 PPP5D1E7EU14 171 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 CLN5O75503 358 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 UMODP07911 640 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 HNF1AP20823 631 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 CEACAM6P40199 344 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 MAGEA5P43359 124 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 UBE2G2P60604 165 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 RPS23P62266 143 aaKnown RBP4.08□□□□□ -1.76
USP44-201ENST00000258499 GNG3P63215 75 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 DTX1Q86Y01 620 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 MRPL41Q8IXM3 137 aaKnown RBP4.08□□□□□ -1.76
USP44-201ENST00000258499 TMEM37Q8WXS4 190 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 ATP5SQ99766 215 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 GPR61Q9BZJ8 451 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 MAP1LC3BQ9GZQ8 125 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 ZNF552Q9H707 407 aaPredicted RBP4.08□□□□□ -1.76
USP44-201ENST00000258499 AURKAIP1Q9NWT8 199 aaPredicted RBP4.08□□□□□ -1.76
USP44-201ENST00000258499 COA4Q9NYJ1 87 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 DOK5Q9P104 306 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 KIAA1456Q9P272 454 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 WASF3Q9UPY6 502 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 NBASA2RRP1 2371 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 TTC28Q96AY4 2481 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 USP34Q70CQ2 3546 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 hCG_38984A0A1B0GV85 526 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 A0A1W2PPV4 95 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 SLC22A20A6NK97 555 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 DEFB108AA8MXU0 73 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 CLDN34H7C241 214 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 CDIPTO14735 213 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 SYNGR2O43760 224 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 IFNA10P01566 189 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 F2RP25116 425 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 PSMB3P49720 205 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 ERVS71-1P61550 626 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 MSMO1Q15800 293 aa4.08□□□□□ -1.76
USP44-201ENST00000258499 RSPO1Q2MKA7 263 aaPredicted RBP4.08□□□□□ -1.76
USP44-201ENST00000258499 NCR3LG1Q68D85 454 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms