RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 C1orf100Q5SVJ3 147 aa18.44■□□□□ 0.54
LSM4-201ENST00000252816 GLT8D1Q68CQ7 371 aa18.44■□□□□ 0.54
LSM4-201ENST00000252816 RAB12Q6IQ22 244 aa18.44■□□□□ 0.54
LSM4-201ENST00000252816 MMP28Q9H239 520 aa18.44■□□□□ 0.54
LSM4-201ENST00000252816 GHRLQ9UBU3 117 aa18.44■□□□□ 0.54
LSM4-201ENST00000252816 PITPNC1Q9UKF7 332 aa18.44■□□□□ 0.54
LSM4-201ENST00000252816 PSG11Q9UQ72 335 aa18.44■□□□□ 0.54
LSM4-201ENST00000252816 PEX16Q9Y5Y5 336 aa18.44■□□□□ 0.54
LSM4-201ENST00000252816 VWFP04275 2813 aa18.44■□□□□ 0.54
LSM4-201ENST00000252816 FAM90A10PA6NDY2 464 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 FAM90A18PA6NE21 464 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 FAM90A16PA6NEW6 464 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 FAM90A20PA6NIJ5 464 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 FAM90A7PA6NKC0 464 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 FAM90A12PA8MX19 464 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 FAM90A5PA8MXJ8 464 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 FAM90A23PA8MXZ1 464 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 MCRIP1C9JLW8 97 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 C15orf65H3BRN8 121 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 J3QR06 171 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 FAM90A15PP0C7V4 464 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 FAM90A13PP0C7W8 464 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 FAM90A14PP0C7W9 464 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 FAM90A24PP0C7X0 464 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 GZMHP20718 246 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 CD24P25063 80 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 TBCEQ15813 527 aaPredicted RBP18.43■□□□□ 0.54
LSM4-201ENST00000252816 FBLN7Q53RD9 439 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 TPTE2P1Q5T6R2 138 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 OR10K2Q6IF99 312 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 UBALD1Q8TB05 177 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 ZNF702PQ9H963 129 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 BLOC1S6Q9UL45 172 aa18.43■□□□□ 0.54
LSM4-201ENST00000252816 VSIG8P0DPA2 414 aa18.42■□□□□ 0.54
LSM4-201ENST00000252816 OR10A7Q8NGE5 316 aa18.42■□□□□ 0.54
LSM4-201ENST00000252816 ARL11Q969Q4 196 aa18.42■□□□□ 0.54
LSM4-201ENST00000252816 CREB3L1Q96BA8 519 aa18.42■□□□□ 0.54
LSM4-201ENST00000252816 GFI1Q99684 422 aa18.42■□□□□ 0.54
LSM4-201ENST00000252816 CST11Q9H112 138 aa18.42■□□□□ 0.54
LSM4-201ENST00000252816 KCNK15Q9H427 330 aa18.42■□□□□ 0.54
LSM4-201ENST00000252816 ETAA1Q9NY74 926 aa18.42■□□□□ 0.54
LSM4-201ENST00000252816 AIPO00170 330 aa18.41■□□□□ 0.54
LSM4-201ENST00000252816 SLC22A1O15245 554 aa18.41■□□□□ 0.54
LSM4-201ENST00000252816 MPIG6BO95866 241 aa18.41■□□□□ 0.54
LSM4-201ENST00000252816 UBBP0CG47 229 aa18.41■□□□□ 0.54
LSM4-201ENST00000252816 FUT3P21217 361 aa18.41■□□□□ 0.54
LSM4-201ENST00000252816 CEACAM3P40198 252 aa18.41■□□□□ 0.54
LSM4-201ENST00000252816 GNG10P50151 68 aa18.41■□□□□ 0.54
LSM4-201ENST00000252816 FABP5Q01469 135 aa18.41■□□□□ 0.54
LSM4-201ENST00000252816 HABP2Q14520 560 aaPredicted RBP18.41■□□□□ 0.54
LSM4-201ENST00000252816 TRAM1Q15629 374 aa18.41■□□□□ 0.54
LSM4-201ENST00000252816 FAM53AQ6NSI3 398 aaPredicted RBP18.41■□□□□ 0.54
LSM4-201ENST00000252816 GAPTQ8N292 157 aa18.41■□□□□ 0.54
LSM4-201ENST00000252816 Q8N2B8 174 aa18.41■□□□□ 0.54
LSM4-201ENST00000252816 OR2T6Q8NHC8 308 aa18.41■□□□□ 0.54
LSM4-201ENST00000252816 ACOT13Q9NPJ3 140 aa18.41■□□□□ 0.54
LSM4-201ENST00000252816 PSMA1P25786 263 aaKnown RBP18.4■□□□□ 0.54
LSM4-201ENST00000252816 BLCAPP62952 87 aa18.4■□□□□ 0.54
LSM4-201ENST00000252816 QRFPP83859 136 aa18.4■□□□□ 0.54
LSM4-201ENST00000252816 SSX1Q16384 188 aa18.4■□□□□ 0.54
LSM4-201ENST00000252816 SYT6Q5T7P8 510 aaPredicted RBP18.4■□□□□ 0.54
LSM4-201ENST00000252816 Q6ZS46 218 aa18.4■□□□□ 0.54
LSM4-201ENST00000252816 SLC16A12Q6ZSM3 486 aa18.4■□□□□ 0.54
LSM4-201ENST00000252816 ZNF367Q7RTV3 350 aa18.4■□□□□ 0.54
LSM4-201ENST00000252816 OR4K15Q8NH41 348 aa18.4■□□□□ 0.54
LSM4-201ENST00000252816 WNK1Q9H4A3 2382 aa18.4■□□□□ 0.54
LSM4-201ENST00000252816 CMYA5Q8N3K9 4069 aa18.39■□□□□ 0.54
LSM4-201ENST00000252816 A0A1W2PPE3 182 aa18.39■□□□□ 0.53
LSM4-201ENST00000252816 UBE2QL1A1L167 161 aa18.39■□□□□ 0.53
LSM4-201ENST00000252816 C12orf77C9JDV5 145 aa18.39■□□□□ 0.53
LSM4-201ENST00000252816 ORC5O43913 435 aa18.39■□□□□ 0.53
LSM4-201ENST00000252816 PDCD6O75340 191 aa18.39■□□□□ 0.53
LSM4-201ENST00000252816 HTR2CP28335 458 aa18.39■□□□□ 0.53
LSM4-201ENST00000252816 BRS3P32247 399 aa18.39■□□□□ 0.53
LSM4-201ENST00000252816 LOXL3P58215 753 aa18.39■□□□□ 0.53
LSM4-201ENST00000252816 UNC119Q13432 240 aa18.39■□□□□ 0.53
LSM4-201ENST00000252816 DIAPH2-AS1Q14236 149 aa18.39■□□□□ 0.53
LSM4-201ENST00000252816 TREML4Q6UXN2 200 aa18.39■□□□□ 0.53
LSM4-201ENST00000252816 SERTAD4Q9NUC0 356 aa18.39■□□□□ 0.53
LSM4-201ENST00000252816 TRAPPC2LQ9UL33 140 aa18.39■□□□□ 0.53
LSM4-201ENST00000252816 AK6Q9Y3D8 172 aaKnown RBP18.39■□□□□ 0.53
LSM4-201ENST00000252816 AMMECR1Q9Y4X0 333 aaPredicted RBP18.39■□□□□ 0.53
LSM4-201ENST00000252816 OOSP1A8MZH6 123 aa18.38■□□□□ 0.53
LSM4-201ENST00000252816 DENRO43583 198 aaKnown RBP18.38■□□□□ 0.53
LSM4-201ENST00000252816 GLAP06280 429 aa18.38■□□□□ 0.53
LSM4-201ENST00000252816 GABARAPL2P60520 117 aa18.38■□□□□ 0.53
LSM4-201ENST00000252816 RPS27AP62979 156 aaKnown RBP18.38■□□□□ 0.53
LSM4-201ENST00000252816 EMX1Q04741 257 aaPredicted RBP18.38■□□□□ 0.53
LSM4-201ENST00000252816 CCDC144NLQ6NUI1 221 aa18.38■□□□□ 0.53
LSM4-201ENST00000252816 C11orf88Q6PI97 169 aa18.38■□□□□ 0.53
LSM4-201ENST00000252816 KLHDC1Q8N7A1 406 aa18.38■□□□□ 0.53
LSM4-201ENST00000252816 OR52M1Q8NGK5 317 aa18.38■□□□□ 0.53
LSM4-201ENST00000252816 OR6M1Q8NGM8 313 aa18.38■□□□□ 0.53
LSM4-201ENST00000252816 RPEQ96AT9 228 aa18.38■□□□□ 0.53
LSM4-201ENST00000252816 TMEM59Q9BXS4 323 aa18.38■□□□□ 0.53
LSM4-201ENST00000252816 GFOD1Q9NXC2 390 aa18.38■□□□□ 0.53
LSM4-201ENST00000252816 IGHV3-43A0A0B4J1X8 118 aa18.37■□□□□ 0.53
LSM4-201ENST00000252816 TMEM14DPA8MWL7 114 aa18.37■□□□□ 0.53
LSM4-201ENST00000252816 SDCBPO00560 298 aaPredicted RBP18.37■□□□□ 0.53
LSM4-201ENST00000252816 TIMM23O14925 209 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms