RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 SEM1Q6ZVN7 128 aa18.35■□□□□ 0.53
CLN6-201ENST00000249806 Q8IYB0 196 aa18.35■□□□□ 0.53
CLN6-201ENST00000249806 OR2W1Q9Y3N9 320 aa18.35■□□□□ 0.53
CLN6-201ENST00000249806 RAB19A4D1S5 217 aa18.35■□□□□ 0.53
CLN6-201ENST00000249806 PGLYRP1O75594 196 aaPredicted RBP18.35■□□□□ 0.53
CLN6-201ENST00000249806 JTBO76095 146 aa18.35■□□□□ 0.53
CLN6-201ENST00000249806 CEBPDP49716 269 aaPredicted RBP18.35■□□□□ 0.53
CLN6-201ENST00000249806 SRPXP78539 464 aa18.35■□□□□ 0.53
CLN6-201ENST00000249806 NHLH2Q02577 135 aa18.35■□□□□ 0.53
CLN6-201ENST00000249806 ZNF826PQ6ZT77 177 aa18.35■□□□□ 0.53
CLN6-201ENST00000249806 CMTM1Q8IZ96 169 aa18.35■□□□□ 0.53
CLN6-201ENST00000249806 HRH4Q9H3N8 390 aa18.35■□□□□ 0.53
CLN6-201ENST00000249806 WFDC1Q9HC57 220 aa18.35■□□□□ 0.53
CLN6-201ENST00000249806 CEACAM1P13688 526 aa18.34■□□□□ 0.53
CLN6-201ENST00000249806 H1FOOQ8IZA3 346 aaPredicted RBP18.34■□□□□ 0.53
CLN6-201ENST00000249806 C1orf162Q8NEQ5 155 aaPredicted RBP18.34■□□□□ 0.53
CLN6-201ENST00000249806 OR14J1Q9UGF5 321 aa18.34■□□□□ 0.53
CLN6-201ENST00000249806 NBEAQ8NFP9 2946 aa18.34■□□□□ 0.53
CLN6-201ENST00000249806 GAPDHP04406 335 aaKnown RBP18.34■□□□□ 0.53
CLN6-201ENST00000249806 FABP6P51161 128 aa18.34■□□□□ 0.53
CLN6-201ENST00000249806 DEFA5Q01523 94 aa18.34■□□□□ 0.53
CLN6-201ENST00000249806 ZNF146Q15072 292 aa18.34■□□□□ 0.53
CLN6-201ENST00000249806 PXDC1Q5TGL8 231 aa18.34■□□□□ 0.53
CLN6-201ENST00000249806 ZNF497Q6ZNH5 498 aa18.34■□□□□ 0.53
CLN6-201ENST00000249806 OR8G5Q8NG78 346 aa18.34■□□□□ 0.53
CLN6-201ENST00000249806 ARL11Q969Q4 196 aa18.34■□□□□ 0.53
CLN6-201ENST00000249806 ZNF71Q9NQZ8 489 aaPredicted RBP18.34■□□□□ 0.53
CLN6-201ENST00000249806 PURGQ9UJV8 347 aaKnown RBP18.34■□□□□ 0.53
CLN6-201ENST00000249806 TRAPPC2LQ9UL33 140 aa18.34■□□□□ 0.53
CLN6-201ENST00000249806 POMT1Q9Y6A1 747 aa18.34■□□□□ 0.53
CLN6-201ENST00000249806 GVINP1Q7Z2Y8 2422 aa18.33■□□□□ 0.53
CLN6-201ENST00000249806 ADAM20O43506 726 aa18.33■□□□□ 0.53
CLN6-201ENST00000249806 CGAP01215 116 aa18.33■□□□□ 0.53
CLN6-201ENST00000249806 EIF5AL1Q6IS14 154 aaKnown RBP18.33■□□□□ 0.53
CLN6-201ENST00000249806 UQCC3Q6UW78 93 aa18.33■□□□□ 0.53
CLN6-201ENST00000249806 BOD1Q96IK1 185 aa18.33■□□□□ 0.53
CLN6-201ENST00000249806 SMIM8Q96KF7 97 aa18.33■□□□□ 0.53
CLN6-201ENST00000249806 CABLES2Q9BTV7 478 aa18.33■□□□□ 0.53
CLN6-201ENST00000249806 ZFP57Q9NU63 452 aa18.33■□□□□ 0.53
CLN6-201ENST00000249806 PROCRQ9UNN8 238 aa18.33■□□□□ 0.53
CLN6-201ENST00000249806 CACNA1DQ01668 2161 aa18.33■□□□□ 0.52
CLN6-201ENST00000249806 SH2D1BO14796 132 aa18.33■□□□□ 0.52
CLN6-201ENST00000249806 WNT9BO14905 357 aa18.33■□□□□ 0.52
CLN6-201ENST00000249806 GPR137BO60478 399 aa18.33■□□□□ 0.52
CLN6-201ENST00000249806 MED6O75586 246 aa18.33■□□□□ 0.52
CLN6-201ENST00000249806 UCP1P25874 307 aa18.33■□□□□ 0.52
CLN6-201ENST00000249806 LPAR6P43657 344 aa18.33■□□□□ 0.52
CLN6-201ENST00000249806 P2RY1P47900 373 aa18.33■□□□□ 0.52
CLN6-201ENST00000249806 C11orf53Q8IXP5 236 aa18.33■□□□□ 0.52
CLN6-201ENST00000249806 C17orf50Q8WW18 174 aa18.33■□□□□ 0.52
CLN6-201ENST00000249806 MAP1BP46821 2468 aaKnown RBP18.32■□□□□ 0.52
CLN6-201ENST00000249806 RP1L1Q8IWN7 2480 aaPredicted RBP18.32■□□□□ 0.52
CLN6-201ENST00000249806 ABCD4O14678 606 aa18.32■□□□□ 0.52
CLN6-201ENST00000249806 MDH2P40926 338 aaKnown RBP18.32■□□□□ 0.52
CLN6-201ENST00000249806 POLR2GP62487 172 aaKnown RBP eCLIP18.32■□□□□ 0.52
CLN6-201ENST00000249806 GNMTQ14749 295 aa18.32■□□□□ 0.52
CLN6-201ENST00000249806 CXorf66Q5JRM2 361 aaPredicted RBP18.32■□□□□ 0.52
CLN6-201ENST00000249806 UBAC2Q8NBM4 344 aa18.32■□□□□ 0.52
CLN6-201ENST00000249806 LRRC46Q96FV0 321 aa18.32■□□□□ 0.52
CLN6-201ENST00000249806 MAGT1Q9H0U3 335 aa18.32■□□□□ 0.52
CLN6-201ENST00000249806 MSL2Q9HCI7 577 aa18.32■□□□□ 0.52
CLN6-201ENST00000249806 TREM2Q9NZC2 230 aa18.32■□□□□ 0.52
CLN6-201ENST00000249806 MUC6Q6W4X9 2439 aa18.32■□□□□ 0.52
CLN6-201ENST00000249806 NUPL2O15504 423 aaKnown RBP18.31■□□□□ 0.52
CLN6-201ENST00000249806 NKX2-1P43699 371 aaPredicted RBP18.31■□□□□ 0.52
CLN6-201ENST00000249806 SULT1A2P50226 295 aa18.31■□□□□ 0.52
CLN6-201ENST00000249806 ASCL1P50553 236 aa18.31■□□□□ 0.52
CLN6-201ENST00000249806 RTP5Q14D33 572 aa18.31■□□□□ 0.52
CLN6-201ENST00000249806 GPR157Q5UAW9 335 aa18.31■□□□□ 0.52
CLN6-201ENST00000249806 Q6ZR03 302 aa18.31■□□□□ 0.52
CLN6-201ENST00000249806 OR51H1Q8NH63 302 aa18.31■□□□□ 0.52
CLN6-201ENST00000249806 SAT2Q96F10 170 aaPredicted RBP18.31■□□□□ 0.52
CLN6-201ENST00000249806 PARP12Q9H0J9 701 aaKnown RBP18.31■□□□□ 0.52
CLN6-201ENST00000249806 TMEM231Q9H6L2 316 aa18.31■□□□□ 0.52
CLN6-201ENST00000249806 MMP26Q9NRE1 261 aa18.31■□□□□ 0.52
CLN6-201ENST00000249806 LUZP4Q9P127 313 aa18.31■□□□□ 0.52
CLN6-201ENST00000249806 ATMQ13315 3056 aa18.31■□□□□ 0.52
CLN6-201ENST00000249806 TMEM218A2RU14 115 aa18.31■□□□□ 0.52
CLN6-201ENST00000249806 TMEM210A6NLX4 147 aa18.31■□□□□ 0.52
CLN6-201ENST00000249806 K7EM74 188 aa18.31■□□□□ 0.52
CLN6-201ENST00000249806 PSPNO60542 156 aa18.31■□□□□ 0.52
CLN6-201ENST00000249806 F2RP25116 425 aa18.31■□□□□ 0.52
CLN6-201ENST00000249806 ID4P47928 161 aa18.31■□□□□ 0.52
CLN6-201ENST00000249806 NMSQ5H8A3 153 aa18.31■□□□□ 0.52
CLN6-201ENST00000249806 SPTBN2O15020 2390 aa18.31■□□□□ 0.52
CLN6-201ENST00000249806 CADP27708 2225 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 IGHV1-18A0A0C4DH31 117 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 TIMM8AO60220 97 aaPredicted RBP18.3■□□□□ 0.52
CLN6-201ENST00000249806 NXPH3O95157 252 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 TESK1Q15569 626 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 PRAMEF6Q5VXH4 476 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 ALKBH2Q6NS38 261 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 IGFL3Q6UXB1 125 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 RPRMLQ8N4K4 120 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 OR10V1Q8NGI7 309 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 UFSP2Q9NUQ7 469 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 GLS2Q9UI32 602 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 BSNQ9UPA5 3926 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 FAM24AA6NFZ4 105 aa18.3■□□□□ 0.52
CLN6-201ENST00000249806 PROB1E7EW31 1015 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms