RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 RFNGQ9Y644 331 aa16.6■□□□□ 0.25
CDC42EP1-201ENST00000249014 TRAV39A0A0B4J263 110 aa16.59■□□□□ 0.25
CDC42EP1-201ENST00000249014 MED19A0JLT2 244 aaPredicted RBP16.59■□□□□ 0.25
CDC42EP1-201ENST00000249014 H0Y980 276 aa16.59■□□□□ 0.25
CDC42EP1-201ENST00000249014 DEGS1O15121 323 aa16.59■□□□□ 0.25
CDC42EP1-201ENST00000249014 WISP2O76076 250 aa16.59■□□□□ 0.25
CDC42EP1-201ENST00000249014 NXPH3O95157 252 aa16.59■□□□□ 0.25
CDC42EP1-201ENST00000249014 CLINT1Q14677 625 aa16.59■□□□□ 0.25
CDC42EP1-201ENST00000249014 ALKBH6Q3KRA9 238 aa16.59■□□□□ 0.25
CDC42EP1-201ENST00000249014 FAM76BQ5HYJ3 339 aa16.59■□□□□ 0.25
CDC42EP1-201ENST00000249014 ODF3L1Q8IXM7 274 aa16.59■□□□□ 0.25
CDC42EP1-201ENST00000249014 SCCPDHQ8NBX0 429 aa16.59■□□□□ 0.25
CDC42EP1-201ENST00000249014 OR10J5Q8NHC4 309 aa16.59■□□□□ 0.25
CDC42EP1-201ENST00000249014 LUZP4Q9P127 313 aa16.59■□□□□ 0.25
CDC42EP1-201ENST00000249014 OR1A1Q9P1Q5 309 aa16.59■□□□□ 0.25
CDC42EP1-201ENST00000249014 TMEM50AO95807 157 aa16.58■□□□□ 0.25
CDC42EP1-201ENST00000249014 OMGP23515 440 aa16.58■□□□□ 0.25
CDC42EP1-201ENST00000249014 CAMLGP49069 296 aa16.58■□□□□ 0.25
CDC42EP1-201ENST00000249014 IDH3GP51553 393 aaPredicted RBP16.58■□□□□ 0.25
CDC42EP1-201ENST00000249014 UCP2P55851 309 aa16.58■□□□□ 0.25
CDC42EP1-201ENST00000249014 PPP1CBP62140 327 aa16.58■□□□□ 0.25
CDC42EP1-201ENST00000249014 P4HA3Q7Z4N8 544 aa16.58■□□□□ 0.25
CDC42EP1-201ENST00000249014 OR5D13Q8NGL4 314 aa16.58■□□□□ 0.25
CDC42EP1-201ENST00000249014 TMEM171Q8WVE6 324 aa16.58■□□□□ 0.25
CDC42EP1-201ENST00000249014 IL1F10Q8WWZ1 152 aa16.58■□□□□ 0.25
CDC42EP1-201ENST00000249014 AKR1E2Q96JD6 320 aa16.58■□□□□ 0.25
CDC42EP1-201ENST00000249014 CABLES2Q9BTV7 478 aa16.58■□□□□ 0.25
CDC42EP1-201ENST00000249014 LYRM2Q9NU23 88 aaPredicted RBP16.58■□□□□ 0.25
CDC42EP1-201ENST00000249014 ERRFI1Q9UJM3 462 aaPredicted RBP16.58■□□□□ 0.25
CDC42EP1-201ENST00000249014 IGHV3-64DA0A0J9YX35 117 aa16.58■□□□□ 0.24
CDC42EP1-201ENST00000249014 DUXBA0A1W2PPF3 345 aa16.58■□□□□ 0.24
CDC42EP1-201ENST00000249014 PROB1E7EW31 1015 aa16.58■□□□□ 0.24
CDC42EP1-201ENST00000249014 SLC33A1O00400 549 aaPredicted RBP16.58■□□□□ 0.24
CDC42EP1-201ENST00000249014 LYZL6O75951 148 aa16.58■□□□□ 0.24
CDC42EP1-201ENST00000249014 F2RP25116 425 aa16.58■□□□□ 0.24
CDC42EP1-201ENST00000249014 SOX8P57073 446 aa16.58■□□□□ 0.24
CDC42EP1-201ENST00000249014 ID3Q02535 119 aa16.58■□□□□ 0.24
CDC42EP1-201ENST00000249014 TMEM252Q8N6L7 170 aa16.58■□□□□ 0.24
CDC42EP1-201ENST00000249014 AIFM2Q9BRQ8 373 aa16.58■□□□□ 0.24
CDC42EP1-201ENST00000249014 RTL8AQ9BWD3 113 aa16.58■□□□□ 0.24
CDC42EP1-201ENST00000249014 C19orf12Q9NSK7 152 aa16.58■□□□□ 0.24
CDC42EP1-201ENST00000249014 NDRG3Q9UGV2 375 aa16.58■□□□□ 0.24
CDC42EP1-201ENST00000249014 SPENQ96T58 3664 aaKnown RBP16.57■□□□□ 0.24
CDC42EP1-201ENST00000249014 NKX2-8O15522 239 aa16.57■□□□□ 0.24
CDC42EP1-201ENST00000249014 PVALBP20472 110 aaPredicted RBP16.57■□□□□ 0.24
CDC42EP1-201ENST00000249014 PLEKHF2Q9H8W4 249 aa16.57■□□□□ 0.24
CDC42EP1-201ENST00000249014 GLRX2Q9NS18 164 aa16.57■□□□□ 0.24
CDC42EP1-201ENST00000249014 CLCF1Q9UBD9 225 aa16.57■□□□□ 0.24
CDC42EP1-201ENST00000249014 ZFHX4Q86UP3 3567 aa16.57■□□□□ 0.24
CDC42EP1-201ENST00000249014 A0A0G2JRQ6 117 aa16.57■□□□□ 0.24
CDC42EP1-201ENST00000249014 SIRPB1O00241 398 aa16.57■□□□□ 0.24
CDC42EP1-201ENST00000249014 OR2H2O95918 312 aa16.57■□□□□ 0.24
CDC42EP1-201ENST00000249014 PRH1P02810 166 aa16.57■□□□□ 0.24
CDC42EP1-201ENST00000249014 LMO1P25800 156 aa16.57■□□□□ 0.24
CDC42EP1-201ENST00000249014 PPT1P50897 306 aa16.57■□□□□ 0.24
CDC42EP1-201ENST00000249014 ERVK11-1P61568 191 aa16.57■□□□□ 0.24
CDC42EP1-201ENST00000249014 TMEM182Q6ZP80 229 aaPredicted RBP16.57■□□□□ 0.24
CDC42EP1-201ENST00000249014 OR51H1Q8NH63 302 aa16.57■□□□□ 0.24
CDC42EP1-201ENST00000249014 TAAR3PQ9P1P4 343 aa16.57■□□□□ 0.24
CDC42EP1-201ENST00000249014 LRP5LA4QPB2 252 aa16.56■□□□□ 0.24
CDC42EP1-201ENST00000249014 PITX3O75364 302 aa16.56■□□□□ 0.24
CDC42EP1-201ENST00000249014 IGLV2-14P01704 120 aa16.56■□□□□ 0.24
CDC42EP1-201ENST00000249014 ABHD14BQ96IU4 210 aa16.56■□□□□ 0.24
CDC42EP1-201ENST00000249014 PRELID1Q9Y255 219 aa16.56■□□□□ 0.24
CDC42EP1-201ENST00000249014 H7C2Y5 167 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 J3QW42 95 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 RAB5CP51148 216 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 UBE2NP61088 152 aaKnown RBP16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 ZNF154Q13106 437 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 GUK1Q16774 197 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 PRR18Q8N4B5 295 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 SLC25A40Q8TBP6 338 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 IL22RA2Q969J5 263 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 CDH20Q9HBT6 801 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 K7N7A8 449 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 CDIPTO14735 213 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 PSG2P11465 335 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 SELEP16581 610 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 CCL11P51671 97 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 VAMP2P63027 116 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 ETV3LQ6ZN32 361 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 FDCSPQ8NFU4 85 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 UBALD1Q8TB05 177 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 STRAPQ9Y3F4 350 aaKnown RBP16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 RNF115Q9Y4L5 304 aa16.55■□□□□ 0.24
CDC42EP1-201ENST00000249014 H0YL77 283 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 CHST1O43916 411 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 TSPAN9O75954 239 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 CST7O76096 145 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 ATP6V0CP27449 155 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 FLI1Q01543 452 aaPredicted RBP16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 TGFBR3Q03167 851 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 MRPL49Q13405 166 aaKnown RBP16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 ZNF266Q14584 549 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 TESK1Q15569 626 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 ZNF497Q6ZNH5 498 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 COMMD1Q8N668 190 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 OR10V1Q8NGI7 309 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 OR5C1Q8NGR4 320 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 TRIB1Q96RU8 372 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms