RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 RTN4IP1Q8WWV3 396 aaPredicted RBP6.7□□□□□ -1.34
CXCR4-201ENST00000241393 CYYR1Q96J86 154 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 HDHD3Q9BSH5 251 aaPredicted RBP6.7□□□□□ -1.34
CXCR4-201ENST00000241393 SEC11CQ9BY50 192 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 ARV1Q9H2C2 271 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 TAF9BQ9HBM6 251 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 ACKR4Q9NPB9 350 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 PARP11Q9NR21 331 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 FBXO9Q9UK97 447 aaPredicted RBP6.7□□□□□ -1.34
CXCR4-201ENST00000241393 ST3GAL6Q9Y274 331 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 NOSIPQ9Y314 301 aaKnown RBP6.7□□□□□ -1.34
CXCR4-201ENST00000241393 STARD10Q9Y365 291 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 TMED3Q9Y3Q3 217 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 SDK2Q58EX2 2172 aa6.7□□□□□ -1.34
CXCR4-201ENST00000241393 PRUNE2Q8WUY3 3088 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 PIGBOS1A0A0B4J2F0 54 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 PQLC2LA1A4F0 135 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 KCNAB3O43448 404 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 SNAPINO95295 136 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 PDGFBP01127 241 aaPredicted RBP6.69□□□□□ -1.34
CXCR4-201ENST00000241393 GLAP06280 429 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 FCGR2CP31995 323 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 LHX2P50458 406 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 RND3P61587 244 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 MPV17LQ2QL34 196 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 TSPO2Q5TGU0 170 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 RPL7L1Q6DKI1 246 aaKnown RBP6.69□□□□□ -1.34
CXCR4-201ENST00000241393 BHLHE23Q8NDY6 225 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 OR2M7Q8NG81 312 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 LYPD6BQ8NI32 183 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 ABHD3Q8WU67 409 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 PIGCQ92535 297 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 GTF3AQ92664 365 aaKnown RBP6.69□□□□□ -1.34
CXCR4-201ENST00000241393 MRPL24Q96A35 216 aaKnown RBP6.69□□□□□ -1.34
CXCR4-201ENST00000241393 ABHD14BQ96IU4 210 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 C18orf12Q96KH6 178 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 MICU1Q9BPX6 476 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 LIME1Q9H400 295 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 SLC2A9Q9NRM0 540 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 AMDHD2Q9Y303 409 aa6.69□□□□□ -1.34
CXCR4-201ENST00000241393 BORCS7-ASMTA0A0B4J1R7 106 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 DUXBA0A1W2PPF3 345 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 PINLYPA6NC86 204 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 ZNF587BE7ETH6 402 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 MASP2O00187 686 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 GPR137BO60478 399 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 LRP3O75074 770 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 SS18L1O75177 396 aaPredicted RBP6.68□□□□□ -1.34
CXCR4-201ENST00000241393 NEURL1O76050 574 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 SYNGR4O95473 234 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 CDS2O95674 445 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 CTXN2P0C2S0 81 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 OR5AC1P0C628 307 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 SEC11BP0C7V7 166 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 PATE4P0C8F1 98 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 OPRM1P35372 400 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 ARR3P36575 388 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 P2RY1P47900 373 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 F2RL1P55085 397 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 CLDN18P56856 261 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 FGF12P61328 243 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 HERV-K104P61576 105 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 FLI1Q01543 452 aaPredicted RBP6.68□□□□□ -1.34
CXCR4-201ENST00000241393 PIGYQ3MUY2 71 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 ANXA2RQ3ZCQ2 193 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 DHRS7BQ6IAN0 325 aaPredicted RBP6.68□□□□□ -1.34
CXCR4-201ENST00000241393 SLC22A25Q6T423 547 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 BTNL8Q6UX41 500 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 LINC00596Q86U02 117 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 PUSL1Q8N0Z8 303 aaKnown RBP6.68□□□□□ -1.34
CXCR4-201ENST00000241393 DEFB123Q8N688 67 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 ZNF611Q8N823 705 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 OR4A4PQ8NGN8 299 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 FGFBP3Q8TAT2 258 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 APOBEC3DQ96AK3 386 aaPredicted RBP6.68□□□□□ -1.34
CXCR4-201ENST00000241393 MSI2Q96DH6 328 aaKnown RBP6.68□□□□□ -1.34
CXCR4-201ENST00000241393 IP6K3Q96PC2 410 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 RIMS4Q9H426 269 aaPredicted RBP6.68□□□□□ -1.34
CXCR4-201ENST00000241393 PLK3Q9H4B4 646 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 OR2S2Q9NQN1 319 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 UQCC1Q9NVA1 299 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 RCC2Q9P258 522 aaKnown RBP6.68□□□□□ -1.34
CXCR4-201ENST00000241393 FBXL17Q9UF56 701 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 NDRG3Q9UGV2 375 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 RTTNQ86VV8 2226 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 LAMA1P25391 3075 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 F8W036 122 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 PRYO14603 147 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 DIRAS3O95661 229 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 HEXAP06865 529 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 ADCYAP1P18509 176 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 RAB5CP51148 216 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 TMEM33P57088 247 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 ARF1P84077 181 aaKnown RBP6.68□□□□□ -1.34
CXCR4-201ENST00000241393 RNPS1Q15287 305 aaKnown RBP6.68□□□□□ -1.34
CXCR4-201ENST00000241393 HMGN3Q15651 99 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 CEACAM21Q3KPI0 293 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 SLC25A26Q70HW3 274 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 MKXQ8IYA7 352 aa6.68□□□□□ -1.34
CXCR4-201ENST00000241393 ZDHHC23Q8IYP9 409 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms