RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 OIT3Q8WWZ8 545 aa12.2□□□□□ -0.46
TARDBP-201ENST00000240185 GMPPAQ96IJ6 420 aaPredicted RBP12.2□□□□□ -0.46
TARDBP-201ENST00000240185 TGIF2-C20orf24A0A0A6YYL0 155 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 HLA-DQA1P01909 254 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 MRGPRX1Q96LB2 322 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 MOSPD3O75425 235 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 RNASE1P07998 156 aaKnown RBP12.19□□□□□ -0.46
TARDBP-201ENST00000240185 SERF2P84101 59 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 WDR25Q64LD2 544 aaPredicted RBP12.19□□□□□ -0.46
TARDBP-201ENST00000240185 WNT2BQ93097 391 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 GGACTQ9BVM4 153 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 MFRPQ9BY79 579 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 TLNRD1Q9H1K6 362 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 PRSS23O95084 383 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 IGLV3-25P01717 112 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 TMEM50BP56557 158 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 ZNF660Q6AZW8 331 aaPredicted RBP12.19□□□□□ -0.46
TARDBP-201ENST00000240185 ZNF519Q8TB69 540 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 TMEM70Q9BUB7 260 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 FOLR2P14207 255 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 PMELP40967 661 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 HOXA4Q00056 320 aaPredicted RBP12.19□□□□□ -0.46
TARDBP-201ENST00000240185 ZNF793Q6ZN11 406 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 PRNTQ86SH4 94 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 F11RQ9Y624 299 aaKnown RBP12.19□□□□□ -0.46
TARDBP-201ENST00000240185 CCL2P13500 99 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 B4GALNT1Q00973 533 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 Q8WTZ3 238 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 RP1P56715 2156 aa12.19□□□□□ -0.46
TARDBP-201ENST00000240185 HSPB1P04792 205 aaKnown RBP12.18□□□□□ -0.46
TARDBP-201ENST00000240185 CEACAM5P06731 702 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 PATE4P0C8F1 98 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 MPLP40238 635 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 DCAF12L2Q5VW00 463 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 FOXQ1Q9C009 403 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 MRPL18Q9H0U6 180 aaKnown RBP12.18□□□□□ -0.46
TARDBP-201ENST00000240185 ALX4Q9H161 411 aaPredicted RBP12.18□□□□□ -0.46
TARDBP-201ENST00000240185 HLA-DRB1P01911 266 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 HOXD4P09016 255 aaPredicted RBP12.18□□□□□ -0.46
TARDBP-201ENST00000240185 IBA57Q5T440 356 aaKnown RBP12.18□□□□□ -0.46
TARDBP-201ENST00000240185 HDHD3Q9BSH5 251 aaPredicted RBP12.18□□□□□ -0.46
TARDBP-201ENST00000240185 KIAA0100Q14667 2235 aaKnown RBP12.18□□□□□ -0.46
TARDBP-201ENST00000240185 IGKV3-7A0A075B6H7 116 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 LINC01387J3KSC0 135 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 FFAR1O14842 300 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 C1QL1O75973 258 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 CEACAM3P40198 252 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 CCL17Q92583 94 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 GNRHR2Q96P88 292 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 PARLQ9H300 379 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 PEF1Q9UBV8 284 aaKnown RBP12.18□□□□□ -0.46
TARDBP-201ENST00000240185 AMMECR1Q9Y4X0 333 aaPredicted RBP12.18□□□□□ -0.46
TARDBP-201ENST00000240185 LGALS7P47929 136 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 ZNF83P51522 516 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 CTAG1AP78358 180 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 MEF2BQ02080 365 aaPredicted RBP12.18□□□□□ -0.46
TARDBP-201ENST00000240185 FZD5Q13467 585 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 OR10D3Q8NH80 312 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 ASCL3Q9NQ33 180 aa12.18□□□□□ -0.46
TARDBP-201ENST00000240185 H0YL77 283 aa12.17□□□□□ -0.46
TARDBP-201ENST00000240185 PLPP3O14495 311 aa12.17□□□□□ -0.46
TARDBP-201ENST00000240185 FCARP24071 287 aa12.17□□□□□ -0.46
TARDBP-201ENST00000240185 NUP37Q8NFH4 326 aa12.17□□□□□ -0.46
TARDBP-201ENST00000240185 COA4Q9NYJ1 87 aa12.17□□□□□ -0.46
TARDBP-201ENST00000240185 PRNDQ9UKY0 176 aa12.17□□□□□ -0.46
TARDBP-201ENST00000240185 PCOLCE2Q9UKZ9 415 aa12.17□□□□□ -0.46
TARDBP-201ENST00000240185 MPC1Q9Y5U8 109 aa12.17□□□□□ -0.46
TARDBP-201ENST00000240185 GAPDHP04406 335 aaKnown RBP12.17□□□□□ -0.46
TARDBP-201ENST00000240185 ATOH7Q8N100 152 aa12.17□□□□□ -0.46
TARDBP-201ENST00000240185 TRGV8A0A0C4DH27 118 aa12.17□□□□□ -0.46
TARDBP-201ENST00000240185 CKS2P33552 79 aa12.17□□□□□ -0.46
TARDBP-201ENST00000240185 RPL34P49207 117 aaKnown RBP12.17□□□□□ -0.46
TARDBP-201ENST00000240185 OR2Y1Q8NGV0 311 aa12.17□□□□□ -0.46
TARDBP-201ENST00000240185 SOSTQ9BQB4 213 aa12.17□□□□□ -0.46
TARDBP-201ENST00000240185 ICE1Q9Y2F5 2266 aa12.17□□□□□ -0.46
TARDBP-201ENST00000240185 TRAV8-7A0A075B6U6 113 aa12.17□□□□□ -0.46
TARDBP-201ENST00000240185 OR4C45A6NMZ5 311 aa12.17□□□□□ -0.46
TARDBP-201ENST00000240185 IGLV3-27P01718 113 aa12.17□□□□□ -0.46
TARDBP-201ENST00000240185 FBXO46Q6PJ61 603 aaPredicted RBP12.17□□□□□ -0.46
TARDBP-201ENST00000240185 PTPMT1Q8WUK0 201 aaPredicted RBP12.17□□□□□ -0.46
TARDBP-201ENST00000240185 PAXXQ9BUH6 204 aa12.17□□□□□ -0.46
TARDBP-201ENST00000240185 SLC23A3Q6PIS1 610 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 WFIKKN1Q96NZ8 548 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 GHITMQ9H3K2 345 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 TUBD1Q9UJT1 453 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 TRGC1P0CF51 173 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 TMIGD3P0DMS9 266 aaPredicted RBP12.16□□□□□ -0.46
TARDBP-201ENST00000240185 MAS1LP35410 378 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 MGAT2Q10469 447 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 RBFOX2O43251 390 aaKnown RBP eCLIP12.16□□□□□ -0.469e-6■□□□□ 10.7
TARDBP-201ENST00000240185 PSG2P11465 335 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 TNFAIP6P98066 277 aaPredicted RBP12.16□□□□□ -0.46
TARDBP-201ENST00000240185 EIF3IQ13347 325 aaKnown RBP12.16□□□□□ -0.46
TARDBP-201ENST00000240185 LRRC75BQ2VPJ9 315 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 AMER3Q8N944 861 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 LSM10Q969L4 123 aaKnown RBP12.16□□□□□ -0.46
TARDBP-201ENST00000240185 TREM2Q9NZC2 230 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 OR5AC2Q9NZP5 309 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 LRP6O75581 1613 aa12.16□□□□□ -0.46
TARDBP-201ENST00000240185 TRGV5A0A0B4J1U4 118 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms