RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 CD300LBA8K4G0 201 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 HS3ST1O14792 307 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 NEURL1O76050 574 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 F2RP25116 425 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 CEBPGP53567 150 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 OR2B8PP59922 312 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 RUNX1Q01196 453 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 HAGHQ16775 308 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 ABHD17BQ5VST6 288 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 RBMS3Q6XE24 437 aaKnown RBP15.99■□□□□ 0.15
CPSF3-201ENST00000238112 OR10J5Q8NHC4 309 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 GTF3AQ92664 365 aaKnown RBP15.99■□□□□ 0.15
CPSF3-201ENST00000238112 MALSU1Q96EH3 234 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 ATP5SQ99766 215 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 FRYLO94915 3013 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 ANKRD30BLA7E2S9 258 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 FAM166BA8MTA8 275 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 EPHA1P21709 976 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 RAB2AP61019 212 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 RPS23P62266 143 aaKnown RBP15.99■□□□□ 0.15
CPSF3-201ENST00000238112 IL24Q13007 206 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 OR8G1Q15617 311 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 STX12Q86Y82 276 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 NANPQ8TBE9 248 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 RDH5Q92781 318 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 POM121L2Q96KW2 1035 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 ZNF488Q96MN9 340 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 LIPGQ9Y5X9 500 aa15.99■□□□□ 0.15
CPSF3-201ENST00000238112 PIGBOS1A0A0B4J2F0 54 aa15.98■□□□□ 0.15
CPSF3-201ENST00000238112 SS18L1O75177 396 aaPredicted RBP15.98■□□□□ 0.15
CPSF3-201ENST00000238112 SERPINE2P07093 398 aa15.98■□□□□ 0.15
CPSF3-201ENST00000238112 ACP1P24666 158 aa15.98■□□□□ 0.15
CPSF3-201ENST00000238112 TLE4Q04727 773 aa15.98■□□□□ 0.15
CPSF3-201ENST00000238112 PCSK4Q6UW60 755 aa15.98■□□□□ 0.15
CPSF3-201ENST00000238112 C20orf204Q6ZNR8 217 aa15.98■□□□□ 0.15
CPSF3-201ENST00000238112 ZNF573Q86YE8 665 aa15.98■□□□□ 0.15
CPSF3-201ENST00000238112 OR5P3Q8WZ94 311 aa15.98■□□□□ 0.15
CPSF3-201ENST00000238112 TCEAL7Q9BRU2 100 aa15.98■□□□□ 0.15
CPSF3-201ENST00000238112 ZPBPQ9BS86 351 aa15.98■□□□□ 0.15
CPSF3-201ENST00000238112 HES7Q9BYE0 225 aa15.98■□□□□ 0.15
CPSF3-201ENST00000238112 TAAR3PQ9P1P4 343 aa15.98■□□□□ 0.15
CPSF3-201ENST00000238112 OR2W1Q9Y3N9 320 aa15.98■□□□□ 0.15
CPSF3-201ENST00000238112 OR51H1Q8NH63 302 aa15.97■□□□□ 0.15
CPSF3-201ENST00000238112 RNASE11Q8TAA1 199 aaKnown RBP15.97■□□□□ 0.15
CPSF3-201ENST00000238112 RNF115Q9Y4L5 304 aa15.97■□□□□ 0.15
CPSF3-201ENST00000238112 H3BQ15 152 aa15.97■□□□□ 0.15
CPSF3-201ENST00000238112 IFNA17P01571 189 aa15.97■□□□□ 0.15
CPSF3-201ENST00000238112 CEACAM1P13688 526 aa15.97■□□□□ 0.15
CPSF3-201ENST00000238112 MAGEA5P43359 124 aa15.97■□□□□ 0.15
CPSF3-201ENST00000238112 RPL23AP62750 156 aaKnown RBP15.97■□□□□ 0.15
CPSF3-201ENST00000238112 HLA-DRB3P79483 266 aa15.97■□□□□ 0.15
CPSF3-201ENST00000238112 SLC25A24Q6NUK1 477 aa15.97■□□□□ 0.15
CPSF3-201ENST00000238112 SLC16A13Q7RTY0 426 aa15.97■□□□□ 0.15
CPSF3-201ENST00000238112 STRADBQ9C0K7 418 aa15.97■□□□□ 0.15
CPSF3-201ENST00000238112 TRBV6-6A0A0A6YYG2 114 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 DFFBO76075 338 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 HBE1P02100 147 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 SRP19P09132 144 aaKnown RBP15.96■□□□□ 0.15
CPSF3-201ENST00000238112 SPINK2P20155 84 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 GNG3P63215 75 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 ZNF324BQ6AW86 544 aaPredicted RBP15.96■□□□□ 0.15
CPSF3-201ENST00000238112 DPPA3Q6W0C5 159 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 FAM58AQ8N1B3 248 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 RBMXL1Q96E39 390 aaKnown RBP15.96■□□□□ 0.15
CPSF3-201ENST00000238112 SMOC1Q9H4F8 434 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 ABI3Q9P2A4 366 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 ERRFI1Q9UJM3 462 aaPredicted RBP15.96■□□□□ 0.15
CPSF3-201ENST00000238112 MPC1Q9Y5U8 109 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 TRAV24A0A0B4J272 114 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 A0A1B0GU03 582 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 OR5B21A6NL26 309 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 JMJD7P0C870 316 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 APLNRP35414 380 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 PAX9P55771 341 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 TAS2R30P59541 319 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 MCEMP1Q8IX19 187 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 IL1F10Q8WWZ1 152 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 TCEAL3Q969E4 200 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 GPR146Q96CH1 333 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 TTTY12Q9BZ98 90 aa15.96■□□□□ 0.15
CPSF3-201ENST00000238112 PCSK5Q92824 1860 aa15.96■□□□□ 0.14
CPSF3-201ENST00000238112 A0A0G2JRQ6 117 aa15.95■□□□□ 0.14
CPSF3-201ENST00000238112 H3BP45 60 aa15.95■□□□□ 0.14
CPSF3-201ENST00000238112 SCAF4O95104 1147 aaKnown RBP15.95■□□□□ 0.14
CPSF3-201ENST00000238112 IFNA5P01569 189 aa15.95■□□□□ 0.14
CPSF3-201ENST00000238112 IGHV2-5P01817 119 aa15.95■□□□□ 0.14
CPSF3-201ENST00000238112 HSPB1P04792 205 aaKnown RBP15.95■□□□□ 0.14
CPSF3-201ENST00000238112 NQO2P16083 231 aa15.95■□□□□ 0.14
CPSF3-201ENST00000238112 MAS1LP35410 378 aa15.95■□□□□ 0.14
CPSF3-201ENST00000238112 TAGLN2P37802 199 aaKnown RBP15.95■□□□□ 0.14
CPSF3-201ENST00000238112 UBE2KP61086 200 aa15.95■□□□□ 0.14
CPSF3-201ENST00000238112 OR1C1Q15619 314 aa15.95■□□□□ 0.14
CPSF3-201ENST00000238112 H1FOOQ8IZA3 346 aaPredicted RBP15.95■□□□□ 0.14
CPSF3-201ENST00000238112 C17orf78Q8N4C9 275 aa15.95■□□□□ 0.14
CPSF3-201ENST00000238112 RAB39BQ96DA2 213 aa15.95■□□□□ 0.14
CPSF3-201ENST00000238112 OR51B6Q9H340 312 aa15.95■□□□□ 0.14
CPSF3-201ENST00000238112 PRO3102Q9H379 93 aa15.95■□□□□ 0.14
CPSF3-201ENST00000238112 AP4M1O00189 453 aa15.95■□□□□ 0.14
CPSF3-201ENST00000238112 PSG2P11465 335 aa15.95■□□□□ 0.14
CPSF3-201ENST00000238112 PLGLB1Q02325 96 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms