RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CNN3Q15417 329 aaKnown RBP11.22□□□□□ -0.61
MSH2-201ENST00000233146 CBLN3Q6UW01 205 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 BHLHA15Q7RTS1 189 aaPredicted RBP11.22□□□□□ -0.61
MSH2-201ENST00000233146 FER1L6-AS1Q8NA97 138 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 TM2D1Q9BX74 207 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 FREM3P0C091 2139 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 PRSS37A4D1T9 235 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 DPRXA6NFQ7 191 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 MDH2P40926 338 aaKnown RBP11.22□□□□□ -0.61
MSH2-201ENST00000233146 TM4SF4P48230 202 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 MGAT2Q10469 447 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 ELAVL3Q14576 367 aaKnown RBP11.22□□□□□ -0.61
MSH2-201ENST00000233146 ZNF765Q7L2R6 523 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 OR5AS1Q8N127 324 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 OR51T1Q8NGJ9 327 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 HOXB13Q92826 284 aaPredicted RBP11.22□□□□□ -0.61
MSH2-201ENST00000233146 SIGLEC12Q96PQ1 595 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 FOXQ1Q9C009 403 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 WNT10AQ9GZT5 417 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 SLC33A1O00400 549 aaPredicted RBP11.22□□□□□ -0.61
MSH2-201ENST00000233146 IFNA5P01569 189 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 TTRP02766 147 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 NPBWR2P48146 333 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 PRRX1P54821 245 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 PHLDA2Q53GA4 152 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 CXorf66Q5JRM2 361 aaPredicted RBP11.22□□□□□ -0.61
MSH2-201ENST00000233146 SPIN3Q5JUX0 258 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 ATG4DQ86TL0 474 aaPredicted RBP11.22□□□□□ -0.61
MSH2-201ENST00000233146 OR2M3Q8NG83 312 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 OR4N2Q8NGD1 307 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 ZNF286AQ9HBT8 521 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 PSG11Q9UQ72 335 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 OR1A2Q9Y585 309 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 J3QR06 171 aa11.21□□□□□ -0.61
MSH2-201ENST00000233146 CT62P0C5K7 136 aa11.21□□□□□ -0.61
MSH2-201ENST00000233146 CTLA4P16410 223 aa11.21□□□□□ -0.61
MSH2-201ENST00000233146 BLVRBP30043 206 aaPredicted RBP11.21□□□□□ -0.61
MSH2-201ENST00000233146 PRICKLE4Q2TBC4 344 aa11.21□□□□□ -0.61
MSH2-201ENST00000233146 MCTS1Q9ULC4 181 aaKnown RBP11.21□□□□□ -0.61
MSH2-201ENST00000233146 PHF1O43189 567 aaPredicted RBP11.21□□□□□ -0.62
MSH2-201ENST00000233146 GNG7O60262 68 aa11.21□□□□□ -0.62
MSH2-201ENST00000233146 EFEMP2O95967 443 aa11.21□□□□□ -0.62
MSH2-201ENST00000233146 NRASP01111 189 aa11.21□□□□□ -0.62
MSH2-201ENST00000233146 KRASP01116 189 aa11.21□□□□□ -0.62
MSH2-201ENST00000233146 PNMTP11086 282 aa11.21□□□□□ -0.62
MSH2-201ENST00000233146 KITLGP21583 273 aa11.21□□□□□ -0.62
MSH2-201ENST00000233146 DEFB125Q8N687 156 aa11.21□□□□□ -0.62
MSH2-201ENST00000233146 ZNF48Q96MX3 618 aaPredicted RBP11.21□□□□□ -0.62
MSH2-201ENST00000233146 APOOQ9BUR5 198 aa11.21□□□□□ -0.62
MSH2-201ENST00000233146 S1PR5Q9H228 398 aa11.21□□□□□ -0.62
MSH2-201ENST00000233146 ANXA10Q9UJ72 324 aa11.21□□□□□ -0.62
MSH2-201ENST00000233146 LRRK1Q38SD2 2015 aa11.21□□□□□ -0.62
MSH2-201ENST00000233146 SERTM2A0A1B0GWG4 89 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 CDIPTO14735 213 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 GPR1P46091 355 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 FMODQ06828 376 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 POM121L1PQ3SYA9 428 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 ASTLQ6HA08 431 aaPredicted RBP11.2□□□□□ -0.62
MSH2-201ENST00000233146 VASH2Q86V25 355 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 PSMG3Q9BT73 122 aaPredicted RBP11.2□□□□□ -0.62
MSH2-201ENST00000233146 CEP290O15078 2479 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 PPIAL4EA0A075B759 164 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 PPIAL4CA0A0B4J2A2 164 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 PPIAL4DF5H284 164 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 FOXS1O43638 330 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 REG1AP05451 166 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 C3orf79P0CE67 100 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 IGLC1P0CG04 106 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 PPIAL4FP0DN26 164 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 PSG9Q00887 426 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 DNM1P34Q6PK57 102 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 SYT13Q7L8C5 426 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 OR1N2Q8NGR9 330 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 FAM206AQ9NX38 181 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 NXT1Q9UKK6 140 aaKnown RBP11.2□□□□□ -0.62
MSH2-201ENST00000233146 PSMB3P49720 205 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 ASCL4Q6XD76 172 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 SGMS2Q8NHU3 365 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 MRPL18Q9H0U6 180 aaKnown RBP11.2□□□□□ -0.62
MSH2-201ENST00000233146 FBRSQ9HAH7 460 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 TMEM74BQ9NUR3 256 aa11.2□□□□□ -0.62
MSH2-201ENST00000233146 POLR2AP24928 1970 aaKnown RBP11.19□□□□□ -0.62
MSH2-201ENST00000233146 SAA2-SAA4A0A096LPE2 208 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 TNFSF12O43508 249 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 CBLN1P23435 193 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 MC5RP33032 325 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 PAX9P55771 341 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 MLF1P58340 268 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 ID3Q02535 119 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 PARS2Q7L3T8 475 aaKnown RBP11.19□□□□□ -0.62
MSH2-201ENST00000233146 ABHD12BQ7Z5M8 362 aaPredicted RBP11.19□□□□□ -0.62
MSH2-201ENST00000233146 COMMD2Q86X83 199 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 OR11L1Q8NGX0 322 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 LHX4Q969G2 390 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 LRFN3Q9BTN0 628 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 MMP17Q9ULZ9 603 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 SERINC4A6NH21 518 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 SPINT1O43278 529 aa11.19□□□□□ -0.62
MSH2-201ENST00000233146 CCR2P41597 374 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms