RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 MSMO1Q15800 293 aa12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 NSUN5P2Q63ZY6 315 aa12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 BSCL2Q96G97 398 aaPredicted RBP12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 Q9N2K0 584 aa12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 PSENENQ9NZ42 101 aa12.85□□□□□ -0.35
UBE2D4-201ENST00000222402 LNP1A1A4G5 178 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 RNF212BA8MTL3 300 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 CEBPZOSA8MTT3 80 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 METTL15P1P0C7V9 234 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 SNRPEP62304 92 aaKnown RBP12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 FOXO1Q12778 655 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 ATP1A1-AS1Q5TC04 95 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 DTX1Q86Y01 620 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 OR5T1Q8NG75 326 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 NUP210LQ5VU65 1888 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 CEACAM6P40199 344 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 CATR1Q13166 79 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 IZUMO4Q1ZYL8 232 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 REPIN1Q9BWE0 567 aaKnown RBP12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 OR2W1Q9Y3N9 320 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 FAM157CP0CG43 387 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 UCP3P55916 312 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 VHLLQ6RSH7 139 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 TCTEX1D2Q8WW35 142 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 WBP1Q96G27 269 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 TMEM9BQ9NQ34 198 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 LIN7CQ9NUP9 197 aaKnown RBP12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 MTCH1Q9NZJ7 389 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 FZR1Q9UM11 496 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 CARHSP1Q9Y2V2 147 aaKnown RBP12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 ATP23Q9Y6H3 246 aa12.84□□□□□ -0.35
UBE2D4-201ENST00000222402 KRASP01116 189 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 PSG2P11465 335 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 S100A2P29034 98 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 PPP1CCP36873 323 aaKnown RBP12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 PPP1CBP62140 327 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 EIF2S3LQ2VIR3 472 aaKnown RBP12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 FBXW9Q5XUX1 488 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 OR2J1Q9GZK6 312 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 FAM234AQ9H0X4 552 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 TMEM100Q9NV29 134 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 IL36GQ9NZH8 169 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 A0A1W2PPH5 198 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 C9orf172C9J069 976 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 J3QT63 122 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 PTAFRP25105 342 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 TGIF1Q15583 401 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 PLPPR2Q96GM1 343 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 DDA1Q9BW61 102 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 LIME1Q9H400 295 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 CACFD1Q9UGQ2 172 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 LIPGQ9Y5X9 500 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 LRP5LA4QPB2 252 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 NEURL1O76050 574 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 HLA-DRB3P79483 266 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 PMP22Q01453 160 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 ETV3LQ6ZN32 361 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 TMEM45BQ96B21 275 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 SLC39A9Q9NUM3 307 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 GNG12Q9UBI6 72 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 MMP24Q9Y5R2 645 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 DOCK10Q96BY6 2186 aa12.83□□□□□ -0.36
UBE2D4-201ENST00000222402 F2RP25116 425 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 LHX2P50458 406 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 ZNF816Q0VGE8 651 aaPredicted RBP12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 IGLV3-1P01715 115 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 DANCRP0C864 163 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 ADCYAP1P18509 176 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 RPS16P62249 146 aaKnown RBP12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 SELENOHQ8IZQ5 122 aaKnown RBP12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 TAAR3PQ9P1P4 343 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 FAM90A10PA6NDY2 464 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 FAM90A18PA6NE21 464 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 FAM90A16PA6NEW6 464 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 FAM90A20PA6NIJ5 464 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 FAM90A8PA6NJQ4 464 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 FAM90A7PA6NKC0 464 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 FAM90A22PA8MWA6 464 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 FAM90A12PA8MX19 464 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 FAM90A5PA8MXJ8 464 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 FAM90A23PA8MXZ1 464 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 MMP7P09237 267 aaPredicted RBP12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 FAM90A15PP0C7V4 464 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 FAM90A13PP0C7W8 464 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 FAM90A14PP0C7W9 464 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 FAM90A24PP0C7X0 464 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 RFESDQ8TAC1 157 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 MSI2Q96DH6 328 aaKnown RBP12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 HINT2Q9BX68 163 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 TINAGQ9UJW2 476 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 WSB1Q9Y6I7 421 aa12.82□□□□□ -0.36
UBE2D4-201ENST00000222402 hCG_1809904A0A1W2PP81 198 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 A0A1W2PR64 198 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 A0A1W2PRV1 198 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 C3orf80F5H4A9 247 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 GFRA1P56159 465 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 CLDN18P56856 261 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 RSRP1Q9BUV0 290 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 LINC00470Q9BZP3 86 aa12.81□□□□□ -0.36
UBE2D4-201ENST00000222402 CEP192Q8TEP8 1941 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms