RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 HILPDAQ9Y5L2 63 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 RP1P56715 2156 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 SVILO95425 2214 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 A0A1W2PPE3 182 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 SPNP16150 400 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 GALR1P47211 349 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 PSG5Q15238 335 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 RPEL1Q2QD12 228 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 MMP26Q9NRE1 261 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 CLDN34H7C241 214 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 P2RY1P47900 373 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 MGAT2Q10469 447 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 C10orf113Q5VZT2 155 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 CLEC18BQ6UXF7 455 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 ZDHHC8Q9ULC8 765 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 SSMEM1Q8WWF3 244 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 ABHD1Q96SE0 405 aa16.51■□□□□ 0.23
SMPD3-201ENST00000219334 ZNF552Q9H707 407 aaPredicted RBP16.51■□□□□ 0.23
SMPD3-201ENST00000219334 TEX50A0A1B0GTY4 177 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 J3QR06 171 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 NPY1RP25929 384 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 PPP1CCP36873 323 aaKnown RBP16.5■□□□□ 0.23
SMPD3-201ENST00000219334 STXBP6Q8NFX7 210 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 OR4P4Q8NGL7 312 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 ITLN1Q8WWA0 313 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 NDUFA2O43678 99 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 DXOO77932 396 aaKnown RBP16.5■□□□□ 0.23
SMPD3-201ENST00000219334 G6PCP35575 357 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 TMEM33P57088 247 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 NHLH1Q02575 133 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 NHLH2Q02577 135 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 MRGPRGQ86SM5 289 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 FAM222BQ8WU58 562 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 MRGPRFQ96AM1 343 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 SLC2A9Q9NRM0 540 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 TRBV5-3A0A0A0MS03 114 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 SCGB1C2P0DMR2 95 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 CSF2RBP32927 897 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 FGF8P55075 233 aaPredicted RBP16.5■□□□□ 0.23
SMPD3-201ENST00000219334 STARD4Q96DR4 205 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 PARP11Q9NR21 331 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 OR5AL1P0C617 328 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 CEACAM21Q3KPI0 293 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 ZNF66Q6ZN08 573 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 IL17BQ9UHF5 180 aa16.5■□□□□ 0.23
SMPD3-201ENST00000219334 CAMPP49913 170 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 TMEM88Q6PEY1 159 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 PGLYRP3Q96LB9 341 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 ZNF488Q96MN9 340 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 TMEM74BQ9NUR3 256 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 A0A1W2PQM1 296 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 TO15178 435 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 VSIG8P0DPA2 414 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 PF4V1P10720 104 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 C19orf57Q0VDD7 668 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 TEX261Q6UWH6 196 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 TMEM37Q8WXS4 190 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 U3KQ87 197 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 MYO5AQ9Y4I1 1855 aaKnown RBP16.49■□□□□ 0.23
SMPD3-201ENST00000219334 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.49■□□□□ 0.23
SMPD3-201ENST00000219334 FCN1O00602 326 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 SCO1O75880 301 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 ADAT3Q96EY9 351 aaPredicted RBP16.49■□□□□ 0.23
SMPD3-201ENST00000219334 PRSS50Q9UI38 385 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 KIAA1324LA8MWY0 1029 aaPredicted RBP16.49■□□□□ 0.23
SMPD3-201ENST00000219334 CTDSPLO15194 276 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 MC5RP33032 325 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 RBM11P57052 281 aaKnown RBP16.49■□□□□ 0.23
SMPD3-201ENST00000219334 NSUN5P2Q63ZY6 315 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 SFXN3Q9BWM7 321 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 SLC35B3Q9H1N7 401 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 MANBALQ9NQG1 85 aa16.49■□□□□ 0.23
SMPD3-201ENST00000219334 THSD7AQ9UPZ6 1657 aa16.48■□□□□ 0.23
SMPD3-201ENST00000219334 UNC13CQ8NB66 2214 aa16.48■□□□□ 0.23
SMPD3-201ENST00000219334 MBPP02686 304 aaPredicted RBP16.48■□□□□ 0.23
SMPD3-201ENST00000219334 FAM87AP0C7U9 286 aa16.48■□□□□ 0.23
SMPD3-201ENST00000219334 LURAP1Q96LR2 239 aa16.48■□□□□ 0.23
SMPD3-201ENST00000219334 CYB5R1Q9UHQ9 305 aa16.48■□□□□ 0.23
SMPD3-201ENST00000219334 IGKV1-8A0A0C4DH67 115 aa16.48■□□□□ 0.23
SMPD3-201ENST00000219334 J3QR89 54 aa16.48■□□□□ 0.23
SMPD3-201ENST00000219334 GUCA2BQ16661 112 aa16.48■□□□□ 0.23
SMPD3-201ENST00000219334 CDCP2Q5VXM1 449 aa16.48■□□□□ 0.23
SMPD3-201ENST00000219334 ZNF107Q9UII5 783 aaPredicted RBP16.48■□□□□ 0.23
SMPD3-201ENST00000219334 CD40P25942 277 aa16.48■□□□□ 0.23
SMPD3-201ENST00000219334 RSPO4Q2I0M5 234 aaPredicted RBP16.48■□□□□ 0.23
SMPD3-201ENST00000219334 GCSAMQ8N6F7 178 aa16.48■□□□□ 0.23
SMPD3-201ENST00000219334 OR1L6Q8NGR2 347 aa16.48■□□□□ 0.23
SMPD3-201ENST00000219334 A0A0U1RQV5 110 aa16.48■□□□□ 0.23
SMPD3-201ENST00000219334 IZUMO4Q1ZYL8 232 aa16.48■□□□□ 0.23
SMPD3-201ENST00000219334 FOXB2Q5VYV0 432 aa16.48■□□□□ 0.23
SMPD3-201ENST00000219334 PITPNC1Q9UKF7 332 aa16.48■□□□□ 0.23
SMPD3-201ENST00000219334 OR51B2Q9Y5P1 312 aa16.48■□□□□ 0.23
SMPD3-201ENST00000219334 HIST1H3AP68431 136 aa16.47■□□□□ 0.23
SMPD3-201ENST00000219334 ATP1A1-AS1Q5TC04 95 aa16.47■□□□□ 0.23
SMPD3-201ENST00000219334 RGPD4Q7Z3J3 1758 aa16.47■□□□□ 0.23
SMPD3-201ENST00000219334 IGSF23A1L1A6 192 aa16.47■□□□□ 0.23
SMPD3-201ENST00000219334 DLL1O00548 723 aa16.47■□□□□ 0.23
SMPD3-201ENST00000219334 COL8A1P27658 744 aa16.47■□□□□ 0.23
SMPD3-201ENST00000219334 WDR73Q6P4I2 378 aa16.47■□□□□ 0.23
SMPD3-201ENST00000219334 CENPVL1A0A0U1RR11 272 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms