RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 ERVFRD-1P60508 538 aa22.41■■□□□ 1.18
CHMP4B-201ENST00000217402 C6orf183Q5T699 404 aa22.41■■□□□ 1.18
CHMP4B-201ENST00000217402 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.41■■□□□ 1.185e-7■■■□□ 15.3
CHMP4B-201ENST00000217402 MOB1BQ7L9L4 216 aa22.41■■□□□ 1.18
CHMP4B-201ENST00000217402 SOSTQ9BQB4 213 aa22.41■■□□□ 1.18
CHMP4B-201ENST00000217402 ST6GALNAC5Q9BVH7 336 aa22.41■■□□□ 1.18
CHMP4B-201ENST00000217402 GAL3ST2Q9H3Q3 398 aa22.41■■□□□ 1.18
CHMP4B-201ENST00000217402 Q9N2K0 584 aa22.41■■□□□ 1.18
CHMP4B-201ENST00000217402 CALYQ9NYX4 217 aa22.41■■□□□ 1.18
CHMP4B-201ENST00000217402 C12orf77C9JDV5 145 aa22.4■■□□□ 1.18
CHMP4B-201ENST00000217402 CD99P14209 185 aa22.4■■□□□ 1.18
CHMP4B-201ENST00000217402 OMGP23515 440 aa22.4■■□□□ 1.18
CHMP4B-201ENST00000217402 DTYMKP23919 212 aa22.4■■□□□ 1.18
CHMP4B-201ENST00000217402 ZNF880Q6PDB4 577 aa22.4■■□□□ 1.18
CHMP4B-201ENST00000217402 RFESDQ8TAC1 157 aa22.4■■□□□ 1.18
CHMP4B-201ENST00000217402 C15orf40Q8WUR7 153 aa22.4■■□□□ 1.18
CHMP4B-201ENST00000217402 TMUB1Q9BVT8 246 aa22.4■■□□□ 1.18
CHMP4B-201ENST00000217402 TAF9BQ9HBM6 251 aa22.4■■□□□ 1.18
CHMP4B-201ENST00000217402 KCNIP1Q9NZI2 227 aa22.4■■□□□ 1.18
CHMP4B-201ENST00000217402 KIAA2026Q5HYC2 2103 aa22.4■■□□□ 1.18
CHMP4B-201ENST00000217402 TPPPO94811 219 aa22.39■■□□□ 1.18
CHMP4B-201ENST00000217402 DLX6P56179 175 aa22.39■■□□□ 1.18
CHMP4B-201ENST00000217402 KRTAP1-1Q07627 177 aa22.39■■□□□ 1.18
CHMP4B-201ENST00000217402 C17orf58Q2M2W7 97 aa22.39■■□□□ 1.18
CHMP4B-201ENST00000217402 FAHD2BQ6P2I3 314 aaPredicted RBP22.39■■□□□ 1.18
CHMP4B-201ENST00000217402 GVQW1Q8N7I0 195 aa22.39■■□□□ 1.18
CHMP4B-201ENST00000217402 ARL11Q969Q4 196 aa22.39■■□□□ 1.18
CHMP4B-201ENST00000217402 FAHD2AQ96GK7 314 aa22.39■■□□□ 1.18
CHMP4B-201ENST00000217402 TAS2R3Q9NYW6 316 aa22.39■■□□□ 1.18
CHMP4B-201ENST00000217402 KBTBD11-OT1A0A1B0GTJ5 212 aa22.39■■□□□ 1.17
CHMP4B-201ENST00000217402 ZNF729A6NN14 1252 aaPredicted RBP22.39■■□□□ 1.17
CHMP4B-201ENST00000217402 LPLP06858 475 aa22.39■■□□□ 1.17
CHMP4B-201ENST00000217402 GZMHP20718 246 aa22.39■■□□□ 1.17
CHMP4B-201ENST00000217402 ETV6P41212 452 aa22.39■■□□□ 1.17
CHMP4B-201ENST00000217402 CR1LQ2VPA4 569 aa22.39■■□□□ 1.17
CHMP4B-201ENST00000217402 PRAMEF5Q5TYX0 476 aa22.39■■□□□ 1.17
CHMP4B-201ENST00000217402 SMR3AQ99954 134 aa22.39■■□□□ 1.17
CHMP4B-201ENST00000217402 IFT46Q9NQC8 304 aa22.39■■□□□ 1.17
CHMP4B-201ENST00000217402 RABL2AQ9UBK7 228 aaPredicted RBP22.39■■□□□ 1.17
CHMP4B-201ENST00000217402 RABL2BQ9UNT1 228 aa22.39■■□□□ 1.17
CHMP4B-201ENST00000217402 ABCA1O95477 2261 aa22.38■■□□□ 1.17
CHMP4B-201ENST00000217402 CGB3P0DN86 165 aa22.38■■□□□ 1.17
CHMP4B-201ENST00000217402 CGB7P0DN87 165 aa22.38■■□□□ 1.17
CHMP4B-201ENST00000217402 DGCR2P98153 550 aa22.38■■□□□ 1.17
CHMP4B-201ENST00000217402 ZNF79Q15937 498 aa22.38■■□□□ 1.17
CHMP4B-201ENST00000217402 LTC4SQ16873 150 aa22.38■■□□□ 1.17
CHMP4B-201ENST00000217402 PYDC2Q56P42 97 aa22.38■■□□□ 1.17
CHMP4B-201ENST00000217402 METTL11BQ5VVY1 283 aa22.38■■□□□ 1.17
CHMP4B-201ENST00000217402 TRAT1Q6PIZ9 186 aa22.38■■□□□ 1.17
CHMP4B-201ENST00000217402 KIR3DL3Q8N743 410 aa22.38■■□□□ 1.17
CHMP4B-201ENST00000217402 OR52I2Q8NH67 350 aa22.38■■□□□ 1.17
CHMP4B-201ENST00000217402 GPX8Q8TED1 209 aa22.38■■□□□ 1.17
CHMP4B-201ENST00000217402 SCPEP1Q9HB40 452 aa22.38■■□□□ 1.17
CHMP4B-201ENST00000217402 C15orf65H3BRN8 121 aa22.37■■□□□ 1.17
CHMP4B-201ENST00000217402 DLX1P56177 255 aa22.37■■□□□ 1.17
CHMP4B-201ENST00000217402 HLA-DRB3P79483 266 aa22.37■■□□□ 1.17
CHMP4B-201ENST00000217402 PRB3Q04118 309 aaPredicted RBP22.37■■□□□ 1.17
CHMP4B-201ENST00000217402 Q8N7P7 452 aa22.37■■□□□ 1.17
CHMP4B-201ENST00000217402 OR1L1Q8NH94 360 aa22.37■■□□□ 1.17
CHMP4B-201ENST00000217402 DMRTB1Q96MA1 342 aa22.37■■□□□ 1.17
CHMP4B-201ENST00000217402 OCSTAMPQ9BR26 566 aa22.37■■□□□ 1.17
CHMP4B-201ENST00000217402 PCGF1Q9BSM1 259 aa22.37■■□□□ 1.17
CHMP4B-201ENST00000217402 SIRT7Q9NRC8 400 aa22.37■■□□□ 1.17
CHMP4B-201ENST00000217402 KPTNQ9Y664 436 aa22.37■■□□□ 1.17
CHMP4B-201ENST00000217402 IGKV1D-8A0A087WSZ0 117 aa22.36■■□□□ 1.17
CHMP4B-201ENST00000217402 M0R1W7 72 aa22.36■■□□□ 1.17
CHMP4B-201ENST00000217402 ORC5O43913 435 aa22.36■■□□□ 1.17
CHMP4B-201ENST00000217402 MMP23AO75900 390 aa22.36■■□□□ 1.17
CHMP4B-201ENST00000217402 HBZP02008 142 aa22.36■■□□□ 1.17
CHMP4B-201ENST00000217402 GATA3P23771 443 aa22.36■■□□□ 1.17
CHMP4B-201ENST00000217402 PAX8Q06710 450 aa22.36■■□□□ 1.17
CHMP4B-201ENST00000217402 HMGN3Q15651 99 aa22.36■■□□□ 1.17
CHMP4B-201ENST00000217402 ZNF782Q6ZMW2 699 aaPredicted RBP22.36■■□□□ 1.17
CHMP4B-201ENST00000217402 C11orf42Q8N5U0 333 aa22.36■■□□□ 1.17
CHMP4B-201ENST00000217402 FCAMRQ8WWV6 532 aa22.36■■□□□ 1.17
CHMP4B-201ENST00000217402 SIRPDQ9H106 197 aa22.36■■□□□ 1.17
CHMP4B-201ENST00000217402 C7orf69Q9H7B7 122 aa22.36■■□□□ 1.17
CHMP4B-201ENST00000217402 ZNF286AQ9HBT8 521 aa22.36■■□□□ 1.17
CHMP4B-201ENST00000217402 OPN4Q9UHM6 478 aa22.36■■□□□ 1.17
CHMP4B-201ENST00000217402 MGAT4AQ9UM21 535 aa22.36■■□□□ 1.17
CHMP4B-201ENST00000217402 WNK2Q9Y3S1 2297 aa22.36■■□□□ 1.17
CHMP4B-201ENST00000217402 POM121CA8CG34 1229 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 C17orf98A8MV24 154 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 TRDCB7Z8K6 153 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 SPINT2O43291 252 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 CD5LO43866 347 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 GDNFP39905 211 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 CBX5P45973 191 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 LINC00299Q6ZSB3 139 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 MFSD4AQ8N468 514 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 AKIP1Q9NQ31 210 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 CSPG4Q6UVK1 2322 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 GABARAPH6UMI1 98 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 SULT1C2O00338 296 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 CTDSPLO15194 276 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 TOX4O94842 621 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 SCTP09683 121 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 MRPS10P82664 201 aaKnown RBP22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 VMO1Q7Z5L0 202 aa22.35■■□□□ 1.17
CHMP4B-201ENST00000217402 SMIM4Q8WVI0 70 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms