RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 WFDC6Q9BQY6 131 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 NKX6-2Q9C056 277 aaPredicted RBP11.91□□□□□ -0.5
SIX4-201ENST00000216513 CHRNA10Q9GZZ6 450 aa11.91□□□□□ -0.5
SIX4-201ENST00000216513 MRM2Q9UI43 246 aaKnown RBP11.91□□□□□ -0.5
SIX4-201ENST00000216513 NDUFA2O43678 99 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 GAPDHP04406 335 aaKnown RBP11.9□□□□□ -0.5
SIX4-201ENST00000216513 PGA4P0DJD7 388 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 PGA3P0DJD8 388 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 MARVELD3Q96A59 401 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 ADTRPQ96IZ2 230 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 ZNF385DQ9H6B1 395 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 SULT1A3P0DMM9 295 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 SULT1A4P0DMN0 295 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 TEX30Q5JUR7 227 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 PDCD11Q14690 1871 aaKnown RBP11.9□□□□□ -0.5
SIX4-201ENST00000216513 IGHV3OR16-12A0A075B7B8 117 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 PRR30Q53SZ7 412 aaPredicted RBP11.9□□□□□ -0.5
SIX4-201ENST00000216513 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 OR4F17Q8NGA8 305 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 MS4A10Q96PG2 267 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 HDHD3Q9BSH5 251 aaPredicted RBP11.9□□□□□ -0.5
SIX4-201ENST00000216513 GREB1LQ9C091 1923 aaPredicted RBP11.9□□□□□ -0.5
SIX4-201ENST00000216513 CDK2AP1O14519 115 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 ZNF787Q6DD87 383 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 PNKDQ8N490 385 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 ZNRF4Q8WWF5 429 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 TMEM204Q9BSN7 226 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 SRRQ9GZT4 340 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 ORM2P19652 201 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 RPUSD3Q6P087 351 aaKnown RBP11.9□□□□□ -0.5
SIX4-201ENST00000216513 OR2W3Q7Z3T1 314 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 GPHA2Q96T91 129 aa11.9□□□□□ -0.5
SIX4-201ENST00000216513 CHEK1O14757 476 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 ADRB1P08588 477 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 HIST1H1DP16402 221 aaKnown RBP11.89□□□□□ -0.51
SIX4-201ENST00000216513 LIPFP07098 398 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 PSMB6P28072 239 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 PRSS53Q2L4Q9 553 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 FNDC7Q5VTL7 733 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 SLC26A10Q8NG04 563 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 GPR27Q9NS67 375 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 AUP1Q9Y679 476 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 LEUTXA8MZ59 168 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 RIPPLY2Q5TAB7 128 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 OR5AP2Q8NGF4 316 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 SCARB1Q8WTV0 552 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 WDR13Q9H1Z4 485 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 CBLN4Q9NTU7 201 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 K7N7A8 449 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 ZNF90Q03938 601 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 C11orf42Q8N5U0 333 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 AKIP1Q9NQ31 210 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 PIPOXQ9P0Z9 390 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 ICE1Q9Y2F5 2266 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 PLA2G5P39877 138 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 ZP4Q12836 540 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 OXA1LQ15070 435 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 SEZ6L2Q6UXD5 910 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 OR10A7Q8NGE5 316 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 CACFD1Q9UGQ2 172 aa11.89□□□□□ -0.51
SIX4-201ENST00000216513 CECR9P0C854 216 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 ZNF708P17019 499 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 C11orf44Q8N8P7 122 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 ST6GALNAC3Q8NDV1 305 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 GPA33Q99795 319 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 NSG2Q9Y328 171 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 TMEM200CA6NKL6 621 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 ADAP1O75689 374 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 IGKV3-11P04433 115 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 ASAH1Q13510 395 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 UNQ5815/PRO19632Q6UWF5 114 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 MESP1Q9BRJ9 268 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 SPRR3Q9UBC9 169 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 MT-ND4LP03901 98 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 HTR1DP28221 377 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 PPP1CCP36873 323 aaKnown RBP11.88□□□□□ -0.51
SIX4-201ENST00000216513 OR1B1Q8NGR6 318 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 ARL2-SNX15V9GYD0 113 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 CACNA1IQ9P0X4 2223 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 COL6A6A6NMZ7 2263 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 ACACAQ13085 2346 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 TCAPO15273 167 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 SOCS1O15524 211 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 H3F3AP84243 136 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 PPP1R1AQ13522 171 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 RGP1Q92546 391 aaPredicted RBP11.88□□□□□ -0.51
SIX4-201ENST00000216513 AURKAIP1Q9NWT8 199 aaPredicted RBP11.88□□□□□ -0.51
SIX4-201ENST00000216513 RNF24Q9Y225 148 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 CXorf66Q5JRM2 361 aaPredicted RBP11.88□□□□□ -0.51
SIX4-201ENST00000216513 FAM222BQ8WU58 562 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 TMEM106BQ9NUM4 274 aa11.88□□□□□ -0.51
SIX4-201ENST00000216513 FAM24AA6NFZ4 105 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 TRDCB7Z8K6 153 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 LYG2Q86SG7 212 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 R3HDM4Q96D70 268 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 CCL27Q9Y4X3 112 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 PROB1E7EW31 1015 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 ZNF727A8MUV8 499 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 IGHV1-2P23083 117 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 HMGN3Q15651 99 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms