RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 TMEM246Q9BRR3 403 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 SHARPINQ9H0F6 387 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 NAA60Q9H7X0 242 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 PRR13Q9NZ81 148 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 DNAJB11Q9UBS4 358 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 ERRFI1Q9UJM3 462 aaPredicted RBP13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 USP24Q9UPU5 2620 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 DYSFO75923 2080 aa13.09□□□□□ -0.31
LAPTM4A-201ENST00000175091 IGSF10Q6WRI0 2623 aa13.08□□□□□ -0.31
LAPTM4A-201ENST00000175091 TRAV39A0A0B4J263 110 aa13.08□□□□□ -0.32
LAPTM4A-201ENST00000175091 CD3EP07766 207 aa13.08□□□□□ -0.32
LAPTM4A-201ENST00000175091 PRDX2P32119 198 aa13.08□□□□□ -0.32
LAPTM4A-201ENST00000175091 SERPINF1P36955 418 aa13.08□□□□□ -0.32
LAPTM4A-201ENST00000175091 SNRPD2P62316 118 aaKnown RBP13.08□□□□□ -0.32
LAPTM4A-201ENST00000175091 TLE1Q04724 770 aa13.08□□□□□ -0.32
LAPTM4A-201ENST00000175091 H1FOOQ8IZA3 346 aaPredicted RBP13.08□□□□□ -0.32
LAPTM4A-201ENST00000175091 FAM222BQ8WU58 562 aa13.08□□□□□ -0.32
LAPTM4A-201ENST00000175091 RTN4IP1Q8WWV3 396 aaPredicted RBP13.08□□□□□ -0.32
LAPTM4A-201ENST00000175091 GALNT14Q96FL9 552 aa13.08□□□□□ -0.32
LAPTM4A-201ENST00000175091 RAB18Q9NP72 206 aa13.08□□□□□ -0.32
LAPTM4A-201ENST00000175091 KCNJ16Q9NPI9 418 aa13.08□□□□□ -0.32
LAPTM4A-201ENST00000175091 RNF7Q9UBF6 113 aa13.08□□□□□ -0.32
LAPTM4A-201ENST00000175091 DSCAMO60469 2012 aa13.08□□□□□ -0.32
LAPTM4A-201ENST00000175091 CFAP46Q8IYW2 2715 aa13.08□□□□□ -0.32
LAPTM4A-201ENST00000175091 IGKV1D-13A0A0B4J2D9 117 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 SIAH2O43255 324 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 IGKV1-13P0DP09 117 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 AESQ08117 197 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 TESK1Q15569 626 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 PHLDA2Q53GA4 152 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 FAM209AQ5JX71 171 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 ASCC1Q8N9N2 400 aaKnown RBP13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 OR10J5Q8NHC4 309 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 NEUROG1Q92886 237 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 PDCD10Q9BUL8 212 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 KIF25Q9UIL4 384 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 PKDREJQ9NTG1 2253 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 IGHV3OR15-7A0A075B7D8 119 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 TEX13DA0A0J9YY54 714 aaPredicted RBP13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 VSTM5A8MXK1 200 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 TNFRSF1AP19438 455 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 GNRHRP30968 328 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 CD80P33681 288 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 GABRA2P47869 451 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 BEX5Q5H9J7 111 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 BOLLQ8N9W6 283 aaKnown RBP13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 CCDC71LQ8N9Z2 235 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 OR11L1Q8NGX0 322 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 ANGPTL6Q8NI99 470 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 GON7Q9BXV9 100 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 TAF9BQ9HBM6 251 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 OR1A1Q9P1Q5 309 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 OR2W1Q9Y3N9 320 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 RNF115Q9Y4L5 304 aa13.07□□□□□ -0.32
LAPTM4A-201ENST00000175091 KIAA2026Q5HYC2 2103 aa13.06□□□□□ -0.32
LAPTM4A-201ENST00000175091 TRAV14DV4A0A0A6YYC5 116 aa13.06□□□□□ -0.32
LAPTM4A-201ENST00000175091 ADAP1O75689 374 aa13.06□□□□□ -0.32
LAPTM4A-201ENST00000175091 RND3P61587 244 aa13.06□□□□□ -0.32
LAPTM4A-201ENST00000175091 EFNB3Q15768 340 aa13.06□□□□□ -0.32
LAPTM4A-201ENST00000175091 LGALSLQ3ZCW2 172 aaPredicted RBP13.06□□□□□ -0.32
LAPTM4A-201ENST00000175091 KRBOX4Q5JUW0 171 aa13.06□□□□□ -0.32
LAPTM4A-201ENST00000175091 ZNF818PQ6ZRF7 136 aa13.06□□□□□ -0.32
LAPTM4A-201ENST00000175091 LDLRAD3Q86YD5 345 aa13.06□□□□□ -0.32
LAPTM4A-201ENST00000175091 FAM185AQ8N0U4 392 aa13.06□□□□□ -0.32
LAPTM4A-201ENST00000175091 SECTM1Q8WVN6 248 aa13.06□□□□□ -0.32
LAPTM4A-201ENST00000175091 IL1F10Q8WWZ1 152 aa13.06□□□□□ -0.32
LAPTM4A-201ENST00000175091 SLA2Q9H6Q3 261 aa13.06□□□□□ -0.32
LAPTM4A-201ENST00000175091 PAIP2BQ9ULR5 123 aaKnown RBP13.06□□□□□ -0.32
LAPTM4A-201ENST00000175091 PPP1R3CQ9UQK1 317 aa13.06□□□□□ -0.32
LAPTM4A-201ENST00000175091 ARFGEF3Q5TH69 2177 aa13.06□□□□□ -0.32
LAPTM4A-201ENST00000175091 OOEPA6NGQ2 149 aa13.05□□□□□ -0.32
LAPTM4A-201ENST00000175091 TUBAL3A6NHL2 446 aa13.05□□□□□ -0.32
LAPTM4A-201ENST00000175091 HMSDA8MTL9 139 aa13.05□□□□□ -0.32
LAPTM4A-201ENST00000175091 FAM25EA8MYX2 175 aa13.05□□□□□ -0.32
LAPTM4A-201ENST00000175091 C12orf77C9JDV5 145 aa13.05□□□□□ -0.32
LAPTM4A-201ENST00000175091 CYB5R3P00387 301 aaPredicted RBP13.05□□□□□ -0.32
LAPTM4A-201ENST00000175091 OR5AC1P0C628 307 aa13.05□□□□□ -0.32
LAPTM4A-201ENST00000175091 CCL8P80075 99 aa13.05□□□□□ -0.32
LAPTM4A-201ENST00000175091 FAM201AQ5SY85 155 aa13.05□□□□□ -0.32
LAPTM4A-201ENST00000175091 STUMQ69YW2 141 aa13.05□□□□□ -0.32
LAPTM4A-201ENST00000175091 GSG1LQ6UXU4 331 aa13.05□□□□□ -0.32
LAPTM4A-201ENST00000175091 PRR18Q8N4B5 295 aa13.05□□□□□ -0.32
LAPTM4A-201ENST00000175091 ZNF565Q8N9K5 539 aa13.05□□□□□ -0.32
LAPTM4A-201ENST00000175091 DSCAML1Q8TD84 2053 aa13.05□□□□□ -0.32
LAPTM4A-201ENST00000175091 GPR31O00270 319 aa13.04□□□□□ -0.32
LAPTM4A-201ENST00000175091 LOXP28300 417 aaPredicted RBP13.04□□□□□ -0.32
LAPTM4A-201ENST00000175091 APOBEC3AP31941 199 aaPredicted RBP13.04□□□□□ -0.32
LAPTM4A-201ENST00000175091 UQCRFS1P47985 274 aa13.04□□□□□ -0.32
LAPTM4A-201ENST00000175091 GLIPR1P48060 266 aa13.04□□□□□ -0.32
LAPTM4A-201ENST00000175091 FGL1Q08830 312 aa13.04□□□□□ -0.32
LAPTM4A-201ENST00000175091 TMEM187Q14656 261 aa13.04□□□□□ -0.32
LAPTM4A-201ENST00000175091 C6orf183Q5T699 404 aa13.04□□□□□ -0.32
LAPTM4A-201ENST00000175091 ZCCHC24Q8N2G6 241 aaKnown RBP13.04□□□□□ -0.32
LAPTM4A-201ENST00000175091 LILRB1Q8NHL6 650 aaPredicted RBP13.04□□□□□ -0.32
LAPTM4A-201ENST00000175091 PPP1R35Q8TAP8 253 aa13.04□□□□□ -0.32
LAPTM4A-201ENST00000175091 PPP1R1CQ8WVI7 109 aa13.04□□□□□ -0.32
LAPTM4A-201ENST00000175091 SEC22AQ96IW7 307 aa13.04□□□□□ -0.32
LAPTM4A-201ENST00000175091 SNX22Q96L94 193 aa13.04□□□□□ -0.32
LAPTM4A-201ENST00000175091 SUCNR1Q9BXA5 334 aa13.04□□□□□ -0.32
LAPTM4A-201ENST00000175091 NMES1Q9C002 83 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms