RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Mrps28Q9CY16 186 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Akip1Q9JJR5 212 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Unc119Q9Z2R6 240 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Rsg1A2A825 258 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 1700015F17RikD3YUK8 150 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Yjefn3F6W8I0 251 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Csn2P10598 231 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Lyl1P27792 278 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Stfa1P35175 97 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Tsr3Q5HZH2 323 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Cnot4Q8BT14 575 aaKnown RBP10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Dhrs7cQ8CHS7 311 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Snapc5Q8R2K7 98 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr830Q8VFJ5 315 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr1155Q8VFR3 314 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr472Q8VG43 310 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Q9CYS6 286 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 TsfmQ9CZR8 324 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Aig1Q9D8B1 262 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 DhdhQ9DBB8 333 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Gm42517A0A1Y7VLQ2 374 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr1158A2BHP7 313 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Prrt2E9PUL5 346 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr62L7MU75 315 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Cd200O54901 278 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Sirt6P59941 334 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Tppp2Q0P5Y3 170 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr125Q14AJ9 320 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Znf511Q6P0X2 227 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Cldnd1Q9CQX5 253 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Prl8a1Q9DAV8 240 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Trex2Q9R1A9 236 aa10.04□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Eml5Q8BQM8 1977 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 TcapO70548 167 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Atp4bP50992 294 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Tmem71Q149F5 287 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Zfp872Q3UVL3 465 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Trav8d-1Q5R1H8 112 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Mrpl22Q8BU88 206 aaKnown RBP10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Slc25a41Q8BVN7 312 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Pom121Q8K3Z9 1200 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Wdr20Q9D5R2 567 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Spint2Q9WU03 252 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 FancmQ8BGE5 2021 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 9130204L05RikG3UWB8 92 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 IghgP01863 330 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Sod2P09671 222 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 UevldQ3U1V6 471 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Slc35e3Q6PGC7 313 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Actbl2Q8BFZ3 376 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Nabp1Q8BGW5 198 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Hbq1aQ8BYM1 145 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Tmem144Q8VEH0 348 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr1002Q8VFK2 318 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr435Q8VFS3 313 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr1294Q8VGE5 312 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Lrrc26Q91W20 331 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Ppp1r35Q9D8C8 260 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Fbxo15Q9QZN0 433 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Fbxw27A0A1D5RLF0 466 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Ube2dnl1A2AFH1 155 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 LalbaP29752 143 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 UbdP63072 162 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Sft2d1Q5SSN7 159 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Prss50Q8BLH5 439 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr1277Q8VF41 303 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr351Q8VGK1 310 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Stard4Q99JV5 224 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Irak1bp1Q9ESJ7 259 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr1490A0A1L1SVH0 321 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Gm4950D3YUM8 205 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 GmlE9PX31 176 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr554E9Q546 317 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 CtsbP10605 339 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Bmp8aP34821 399 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Bmp8bP55105 399 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Ppp1ccP63087 323 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Tas2r120Q7M721 295 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Parp16Q7TMM8 322 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr774Q7TRI5 312 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr453Q7TRV7 317 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Lrrc75aQ7TSF4 339 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Nmnat2Q8BNJ3 307 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Srsf4Q8VE97 489 aaKnown RBP10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Etfrf1Q91V16 86 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Rgs19Q9CX84 216 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Wdr4Q9EP82 413 aa10.03□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Igkv6-29A0A0G2JEI6 115 aa10.02□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Olfr1326-ps1A0A140T8J7 311 aa10.02□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Uck1P52623 277 aa10.02□□□□□ -0.8
Topbp1-201ENSMUST00000035164 F13bQ07968 669 aa10.02□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Q3TEI4 1023 aa10.02□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Tmprss13Q5U405 543 aa10.02□□□□□ -0.8
Topbp1-201ENSMUST00000035164 DdiasQ6NZG4 898 aa10.02□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Tmem42Q9CR22 157 aa10.02□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Ergic1Q9DC16 290 aaKnown RBP10.02□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Dusp13Q9QYJ7 198 aa10.02□□□□□ -0.8
Topbp1-201ENSMUST00000035164 Crybg1A0A0G2JG52 2065 aa10.02□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Tcrg-V5A0A0G2JGV5 113 aa10.02□□□□□ -0.81
Topbp1-201ENSMUST00000035164 Cer1O55233 272 aa10.02□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 41.1 ms