RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Fgf16Q9ESL8 207 aa14.28□□□□□ -0.12
Trim28-201ENSMUST00000005705 SrpxQ9R0M3 464 aa14.28□□□□□ -0.12
Trim28-201ENSMUST00000005705 Ndufa7Q9Z1P6 113 aaKnown RBP14.28□□□□□ -0.12
Trim28-201ENSMUST00000005705 Mbd2Q9Z2E1 414 aa14.28□□□□□ -0.12
Trim28-201ENSMUST00000005705 Gm14597A2CFG5 200 aa14.27□□□□□ -0.12
Trim28-201ENSMUST00000005705 Rabl2E9Q9D5 223 aa14.27□□□□□ -0.12
Trim28-201ENSMUST00000005705 Gramd2aQ3V3G7 320 aa14.27□□□□□ -0.12
Trim28-201ENSMUST00000005705 Pced1aQ6P1Z5 449 aa14.27□□□□□ -0.12
Trim28-201ENSMUST00000005705 Flrt1Q6RKD8 674 aa14.27□□□□□ -0.12
Trim28-201ENSMUST00000005705 Lpar6Q8BMC0 344 aa14.27□□□□□ -0.12
Trim28-201ENSMUST00000005705 Eddm3bQ8K0E4 149 aa14.27□□□□□ -0.12
Trim28-201ENSMUST00000005705 Rtl8bQ9D1F0 113 aa14.27□□□□□ -0.12
Trim28-201ENSMUST00000005705 Stpg4Q9DAG5 247 aa14.27□□□□□ -0.12
Trim28-201ENSMUST00000005705 PaplnQ9EPX2 1280 aa14.27□□□□□ -0.12
Trim28-201ENSMUST00000005705 Mrps34Q9JIK9 218 aa14.27□□□□□ -0.12
Trim28-201ENSMUST00000005705 Tas2r4Q9JKT3 297 aa14.27□□□□□ -0.12
Trim28-201ENSMUST00000005705 Cacna1gQ5SUF7 2381 aa14.27□□□□□ -0.12
Trim28-201ENSMUST00000005705 Olfr1532-ps1A0A0R4J8U2 307 aa14.27□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr1158A2BHP7 313 aa14.27□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr707K7N662 307 aa14.27□□□□□ -0.13
Trim28-201ENSMUST00000005705 Ahsa1Q8BK64 338 aa14.27□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr51Q8VGG9 307 aa14.27□□□□□ -0.13
Trim28-201ENSMUST00000005705 Taf9Q8VI33 264 aa14.27□□□□□ -0.13
Trim28-201ENSMUST00000005705 Tmem123Q91Z22 195 aa14.27□□□□□ -0.13
Trim28-201ENSMUST00000005705 Nudt21Q9CQF3 227 aaKnown RBP14.27□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gpx8Q9D7B7 209 aa14.27□□□□□ -0.13
Trim28-201ENSMUST00000005705 Sec11cQ9D8V7 192 aa14.27□□□□□ -0.13
Trim28-201ENSMUST00000005705 Akip1Q9JJR5 212 aa14.27□□□□□ -0.13
Trim28-201ENSMUST00000005705 Ppt1O88531 306 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Cyb5aP56395 134 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr1385Q7TQT1 309 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Wbp1lQ8BGW2 348 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Ubqln3Q8C5U9 658 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Ppp1r3bQ8C767 284 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Tmem144Q8VEH0 348 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Rnaseh2cQ9CQ18 166 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Tmem186Q9CR76 216 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Nkain1Q9D035 207 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Irak1bp1Q9ESJ7 259 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Ccr9Q9WUT7 369 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Zfp407G3UVV3 2246 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Myo7bQ99MZ6 2113 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Svs6Q64356 99 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Tmem88Q9D0N8 159 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Rab25Q9WTL2 213 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Prss1Q9Z1R9 246 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gm17655A0A1B0GT13 591 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Rab3cP62823 227 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Vmn1r236Q05A06 334 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Nkain2Q4PNJ2 208 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gpr135Q7TQP2 457 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Foxn4Q8K3Q3 521 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 St8sia6Q8K4T1 398 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 LitafQ9JLJ0 161 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Defb3Q9WTL0 63 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Efemp2Q9WVJ9 443 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Lrp4Q8VI56 1905 aa14.26□□□□□ -0.13
Trim28-201ENSMUST00000005705 Trav13d-3J3QMG8 112 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Emg1O35130 244 aaKnown RBP14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gpr33O88416 339 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Il4P07750 140 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Supt4h1aP63271 117 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gpr173Q6PI62 373 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Cacfd1Q8BG21 171 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 LmlnQ8BMN4 681 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Dctn4Q8CBY8 467 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Slc38a2Q8CFE6 504 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Asb13Q8VBX0 278 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr593Q8VF28 327 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Pop4Q9CR08 221 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Tmem50bQ9D1X9 158 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Ndufa9Q9DC69 377 aaKnown RBP14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Elovl1Q9JLJ5 279 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Hacd1Q9QY80 281 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Raet1aO08602 253 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Raet1bO08603 253 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gm6760Q0ZNK3 87 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr1340Q3KPC7 315 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Rnf224Q3UIW8 156 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Ewsr1Q61545 655 aaKnown RBP14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 D1Ertd622eQ8VEB3 207 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr133Q8VG94 312 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr50Q8VGK5 312 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Hyal1Q91ZJ9 462 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Slc31a2Q9CPU9 143 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Arrdc2Q9D668 407 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Wdr5bQ9D7H2 328 aa14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Dtd1Q9DD18 209 aaKnown RBP14.25□□□□□ -0.13
Trim28-201ENSMUST00000005705 Wisp3D3Z5L9 354 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Ceacam16E9QA28 426 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 TcapO70548 167 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Cldn18P56857 264 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Pias2Q8C5D8 621 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gpn1Q8VCE2 372 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Znf385aQ8VD12 386 aaKnown RBP14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Olfr1279Q8VF38 313 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Q9CQT9 129 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Samd8Q9DA37 478 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Smco4Q9JIS3 59 aa14.24□□□□□ -0.13
Trim28-201ENSMUST00000005705 Gm11361A0A1Y7VKY1 152 aa14.24□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms