RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	PROK1	P58294	105 aa		12.14	□□□□□ -0.47
PHGDH-231	ENST00000641939	ATAD3C	Q5T2N8	411 aa		12.14	□□□□□ -0.47
PHGDH-231	ENST00000641939	FAM27D1	Q5T7N8	215 aa		12.14	□□□□□ -0.47
PHGDH-231	ENST00000641939	LIPK	Q5VXJ0	399 aa		12.14	□□□□□ -0.47
PHGDH-231	ENST00000641939	SLC35E4	Q6ICL7	350 aa		12.14	□□□□□ -0.47
PHGDH-231	ENST00000641939	PRSS48	Q7RTY5	328 aa		12.14	□□□□□ -0.47
PHGDH-231	ENST00000641939	LYPD6	Q86Y78	171 aa		12.14	□□□□□ -0.47
PHGDH-231	ENST00000641939	ZNF596	Q8TC21	504 aa		12.14	□□□□□ -0.47
PHGDH-231	ENST00000641939	UFD1	Q92890	307 aa		12.14	□□□□□ -0.47
PHGDH-231	ENST00000641939	CCDC90B	Q9GZT6	254 aa		12.14	□□□□□ -0.47
PHGDH-231	ENST00000641939	TCF7L1	Q9HCS4	588 aa		12.14	□□□□□ -0.47
PHGDH-231	ENST00000641939	ISYNA1	Q9NPH2	558 aa		12.14	□□□□□ -0.47
PHGDH-231	ENST00000641939	RAB26	Q9ULW5	256 aa		12.14	□□□□□ -0.47
PHGDH-231	ENST00000641939	HILPDA	Q9Y5L2	63 aa		12.14	□□□□□ -0.47
PHGDH-231	ENST00000641939	CMYA5	Q8N3K9	4069 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939		A0A087X0M5	115 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939		A0A1B0GX30	115 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	FAM172BP	A6NC97	362 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	HSMCR30	P0CW71	290 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	RAB13	P51153	203 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	GP2	P55259	537 aa	Known RBP	12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	TPBG	Q13641	420 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	RBM48	Q5RL73	367 aa	Known RBP	12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	BRICD5	Q6PL45	260 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	CEACAM19	Q7Z692	300 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	PHYHIP	Q92561	330 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	KIRREL1	Q96J84	757 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	ZNF696	Q9H7X3	374 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	LINC00574	Q9H8X3	128 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	ZNF286A	Q9HBT8	521 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	SPACA1	Q9HBV2	294 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	CALY	Q9NYX4	217 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	DPM3	Q9P2X0	92 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	PITPNC1	Q9UKF7	332 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	TCF19	Q9Y242	345 aa		12.13	□□□□□ -0.47
PHGDH-231	ENST00000641939	F2RL2	O00254	374 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	TOR1A	O14656	332 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	CHST1	O43916	411 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	CRTAP	O75718	401 aa	Predicted RBP	12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	SC5D	O75845	299 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	IL1A	P01583	271 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	IGLV1-47	P01700	117 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	NFYB	P25208	207 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	GABRA5	P31644	462 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	VHL	P40337	213 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	PRRX1	P54821	245 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	SRSF4	Q08170	494 aa	Known RBP	12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	HSD17B12	Q53GQ0	312 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	PRR31	Q5SQ13	230 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	LRRTM1	Q86UE6	522 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	OR4C13	Q8NGP0	309 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	MRGPRD	Q8TDS7	321 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	NEK7	Q8TDX7	302 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	CREB3L1	Q96BA8	519 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	CITED1	Q99966	193 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	SELENOI	Q9C0D9	397 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	BANF2	Q9H503	90 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	RANBP3	Q9H6Z4	567 aa	Predicted RBP	12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	IDI2-AS1	Q9NZ38	188 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	FBLN5	Q9UBX5	448 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	BLOC1S6	Q9UL45	172 aa		12.12	□□□□□ -0.47
PHGDH-231	ENST00000641939	TRAV39	A0A0B4J263	110 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	TMEM30CP	A0ZSE6	113 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939		A6NDX4	124 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	FAM90A10P	A6NDY2	464 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	FAM90A18P	A6NE21	464 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	FAM90A16P	A6NEW6	464 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	FAM90A20P	A6NIJ5	464 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	FAM90A7P	A6NKC0	464 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	FAM90A22P	A8MWA6	464 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	FAM90A12P	A8MX19	464 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	FAM90A5P	A8MXJ8	464 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	FAM90A23P	A8MXZ1	464 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	LEUTX	A8MZ59	168 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	NPIPB11	E5RHQ5	1161 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	UCHL1	P09936	223 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	FAM90A15P	P0C7V4	464 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	FAM90A13P	P0C7W8	464 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	FAM90A14P	P0C7W9	464 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	FAM90A24P	P0C7X0	464 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	MGMT	P16455	207 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	JUNB	P17275	347 aa	Predicted RBP	12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	SRM	P19623	302 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	GZMH	P20718	246 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	CEACAM3	P40198	252 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	KIR2DS4	P43632	304 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	KRTAP10-3	P60369	221 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	MLLT11	Q13015	90 aa	Predicted RBP	12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	RBM39	Q14498	530 aa	Known RBP	12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	TRAM1	Q15629	374 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	HLA-DRB5	Q30154	266 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	GLT8D1	Q68CQ7	371 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	TMEM104	Q8NE00	496 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	RFESD	Q8TAC1	157 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	TMEM203	Q969S6	136 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	NPFFR1	Q9GZQ6	430 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	RCC2	Q9P258	522 aa	Known RBP	12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	GHRL	Q9UBU3	117 aa		12.11	□□□□□ -0.47
PHGDH-231	ENST00000641939	MCRIP1	C9JLW8	97 aa		12.1	□□□□□ -0.47
PHGDH-231	ENST00000641939	BUB1B-PAK6	H3BSN5	160 aa		12.1	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms