RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ZNF841Q6ZN19 808 aa14.49□□□□□ -0.09
PHGDH-230ENST00000641927 GVQW1Q8N7I0 195 aa14.49□□□□□ -0.09
PHGDH-230ENST00000641927 RAB39BQ96DA2 213 aa14.49□□□□□ -0.09
PHGDH-230ENST00000641927 SDHCQ99643 169 aaPredicted RBP14.49□□□□□ -0.09
PHGDH-230ENST00000641927 SSBP3Q9BWW4 388 aaPredicted RBP14.49□□□□□ -0.09
PHGDH-230ENST00000641927 ITPR2Q14571 2701 aa14.49□□□□□ -0.09
PHGDH-230ENST00000641927 VPS13CQ709C8 3753 aa14.49□□□□□ -0.09
PHGDH-230ENST00000641927 ODAMA1E959 279 aa14.49□□□□□ -0.09
PHGDH-230ENST00000641927 GSTZ1O43708 216 aaPredicted RBP14.49□□□□□ -0.09
PHGDH-230ENST00000641927 NAPSAO96009 420 aa14.49□□□□□ -0.09
PHGDH-230ENST00000641927 HEXAP06865 529 aa14.49□□□□□ -0.09
PHGDH-230ENST00000641927 CBX5P45973 191 aa14.49□□□□□ -0.09
PHGDH-230ENST00000641927 INPP1P49441 399 aa14.49□□□□□ -0.09
PHGDH-230ENST00000641927 NPY4RP50391 375 aa14.49□□□□□ -0.09
PHGDH-230ENST00000641927 BAK1Q16611 211 aa14.49□□□□□ -0.09
PHGDH-230ENST00000641927 WDR25Q64LD2 544 aaPredicted RBP14.49□□□□□ -0.09
PHGDH-230ENST00000641927 PRSS57Q6UWY2 283 aa14.49□□□□□ -0.09
PHGDH-230ENST00000641927 F5H0A9 414 aaPredicted RBP14.48□□□□□ -0.09
PHGDH-230ENST00000641927 ORC5O43913 435 aa14.48□□□□□ -0.09
PHGDH-230ENST00000641927 RCC1P18754 421 aaPredicted RBP14.48□□□□□ -0.09
PHGDH-230ENST00000641927 DTYMKP23919 212 aa14.48□□□□□ -0.09
PHGDH-230ENST00000641927 ERP29P30040 261 aaKnown RBP14.48□□□□□ -0.09
PHGDH-230ENST00000641927 GLP1RP43220 463 aa14.48□□□□□ -0.09
PHGDH-230ENST00000641927 ACTBP60709 375 aa14.48□□□□□ -0.09
PHGDH-230ENST00000641927 LMO4P61968 165 aa14.48□□□□□ -0.09
PHGDH-230ENST00000641927 RPL31P62899 125 aaKnown RBP14.48□□□□□ -0.09
PHGDH-230ENST00000641927 ACTG1P63261 375 aa14.48□□□□□ -0.09
PHGDH-230ENST00000641927 DCTN2Q13561 401 aaKnown RBP14.48□□□□□ -0.09
PHGDH-230ENST00000641927 BTN2A1Q7KYR7 527 aa14.48□□□□□ -0.09
PHGDH-230ENST00000641927 MRGPRDQ8TDS7 321 aa14.48□□□□□ -0.09
PHGDH-230ENST00000641927 Q96MF0 132 aa14.48□□□□□ -0.09
PHGDH-230ENST00000641927 OCSTAMPQ9BR26 566 aa14.48□□□□□ -0.09
PHGDH-230ENST00000641927 DCTN5Q9BTE1 182 aa14.48□□□□□ -0.09
PHGDH-230ENST00000641927 CCDC32Q9BV29 185 aa14.48□□□□□ -0.09
PHGDH-230ENST00000641927 ABCB10Q9NRK6 738 aa14.48□□□□□ -0.09
PHGDH-230ENST00000641927 MTFP1Q9UDX5 166 aa14.48□□□□□ -0.09
PHGDH-230ENST00000641927 LANCL1O43813 399 aa14.47□□□□□ -0.09
PHGDH-230ENST00000641927 USF1P22415 310 aaPredicted RBP14.47□□□□□ -0.09
PHGDH-230ENST00000641927 GDNFP39905 211 aa14.47□□□□□ -0.09
PHGDH-230ENST00000641927 PAX5Q02548 391 aa14.47□□□□□ -0.09
PHGDH-230ENST00000641927 Q6ZPA2 131 aa14.47□□□□□ -0.09
PHGDH-230ENST00000641927 FAM185AQ8N0U4 392 aa14.47□□□□□ -0.09
PHGDH-230ENST00000641927 GAPTQ8N292 157 aa14.47□□□□□ -0.09
PHGDH-230ENST00000641927 PRR18Q8N4B5 295 aa14.47□□□□□ -0.09
PHGDH-230ENST00000641927 BORCS5Q969J3 196 aa14.47□□□□□ -0.09
PHGDH-230ENST00000641927 FOXC2Q99958 501 aa14.47□□□□□ -0.09
PHGDH-230ENST00000641927 Q9N2K0 584 aa14.47□□□□□ -0.09
PHGDH-230ENST00000641927 C19orf12Q9NSK7 152 aa14.47□□□□□ -0.09
PHGDH-230ENST00000641927 PDZD2O15018 2839 aa14.47□□□□□ -0.09
PHGDH-230ENST00000641927 CSMD1Q96PZ7 3565 aa14.46□□□□□ -0.09
PHGDH-230ENST00000641927 TRGV10A0A0A0MS01 117 aa14.46□□□□□ -0.09
PHGDH-230ENST00000641927 A0A1W2PQ09 198 aa14.46□□□□□ -0.09
PHGDH-230ENST00000641927 hADV38S2A0JD32 116 aa14.46□□□□□ -0.09
PHGDH-230ENST00000641927 GPR37O15354 613 aa14.46□□□□□ -0.09
PHGDH-230ENST00000641927 IL7P13232 177 aa14.46□□□□□ -0.09
PHGDH-230ENST00000641927 IL2RGP31785 369 aa14.46□□□□□ -0.09
PHGDH-230ENST00000641927 RCVRNP35243 200 aa14.46□□□□□ -0.09
PHGDH-230ENST00000641927 ZNF57Q68EA5 555 aaPredicted RBP14.46□□□□□ -0.09
PHGDH-230ENST00000641927 OR52W1Q6IF63 320 aa14.46□□□□□ -0.09
PHGDH-230ENST00000641927 MOB1BQ7L9L4 216 aa14.46□□□□□ -0.09
PHGDH-230ENST00000641927 ZNF565Q8N9K5 539 aa14.46□□□□□ -0.09
PHGDH-230ENST00000641927 BEST4Q8NFU0 473 aa14.46□□□□□ -0.09
PHGDH-230ENST00000641927 OR13A1Q8NGR1 328 aa14.46□□□□□ -0.09
PHGDH-230ENST00000641927 ZNF286AQ9HBT8 521 aa14.46□□□□□ -0.09
PHGDH-230ENST00000641927 KCNIP1Q9NZI2 227 aa14.46□□□□□ -0.09
PHGDH-230ENST00000641927 OR6C3Q9NZP0 311 aa14.46□□□□□ -0.09
PHGDH-230ENST00000641927 ITGB1BP2Q9UKP3 347 aa14.46□□□□□ -0.09
PHGDH-230ENST00000641927 TRBV6-6A0A0A6YYG2 114 aa14.46□□□□□ -0.1
PHGDH-230ENST00000641927 LINC00854A0A1B0GVQ3 168 aa14.46□□□□□ -0.1
PHGDH-230ENST00000641927 RNF223E7ERA6 249 aa14.46□□□□□ -0.1
PHGDH-230ENST00000641927 HLA-DMAP28067 261 aa14.46□□□□□ -0.1
PHGDH-230ENST00000641927 LCN2P80188 198 aa14.46□□□□□ -0.1
PHGDH-230ENST00000641927 C16orf87Q6PH81 154 aa14.46□□□□□ -0.1
PHGDH-230ENST00000641927 HOGA1Q86XE5 327 aa14.46□□□□□ -0.1
PHGDH-230ENST00000641927 KRTAP1-3Q8IUG1 177 aa14.46□□□□□ -0.1
PHGDH-230ENST00000641927 TRIM63Q969Q1 353 aa14.46□□□□□ -0.1
PHGDH-230ENST00000641927 BAHCC1Q9P281 2608 aa14.45□□□□□ -0.1
PHGDH-230ENST00000641927 MAP1AP78559 2803 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-230ENST00000641927 TRBV23-1A0A0A0MS06 115 aa14.45□□□□□ -0.1
PHGDH-230ENST00000641927 GSTT2BP0CG30 244 aa14.45□□□□□ -0.1
PHGDH-230ENST00000641927 C6orf183Q5T699 404 aa14.45□□□□□ -0.1
PHGDH-230ENST00000641927 TOMM5Q8N4H5 51 aa14.45□□□□□ -0.1
PHGDH-230ENST00000641927 UBALD1Q8TB05 177 aa14.45□□□□□ -0.1
PHGDH-230ENST00000641927 SNAPC3Q92966 411 aa14.45□□□□□ -0.1
PHGDH-230ENST00000641927 LPAR2Q9HBW0 351 aa14.45□□□□□ -0.1
PHGDH-230ENST00000641927 LPAR3Q9UBY5 353 aa14.45□□□□□ -0.1
PHGDH-230ENST00000641927 RBMX2Q9Y388 322 aaKnown RBP14.45□□□□□ -0.1
PHGDH-230ENST00000641927 LOC105371242A0A075B767 164 aa14.44□□□□□ -0.1
PHGDH-230ENST00000641927 IGKV1D-8A0A087WSZ0 117 aa14.44□□□□□ -0.1
PHGDH-230ENST00000641927 TRDCB7Z8K6 153 aa14.44□□□□□ -0.1
PHGDH-230ENST00000641927 UPK1BO75841 260 aa14.44□□□□□ -0.1
PHGDH-230ENST00000641927 CSF1P09603 554 aa14.44□□□□□ -0.1
PHGDH-230ENST00000641927 SSTR5P35346 364 aa14.44□□□□□ -0.1
PHGDH-230ENST00000641927 ARPC4P59998 168 aa14.44□□□□□ -0.1
PHGDH-230ENST00000641927 SSBP1Q04837 148 aaKnown RBP14.44□□□□□ -0.1
PHGDH-230ENST00000641927 MEF2CQ06413 473 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-230ENST00000641927 CHRFAM7AQ494W8 412 aa14.44□□□□□ -0.1
PHGDH-230ENST00000641927 CD276Q5ZPR3 534 aa14.44□□□□□ -0.1
PHGDH-230ENST00000641927 TMEM200BQ69YZ2 307 aa14.44□□□□□ -0.1
PHGDH-230ENST00000641927 ZNF880Q6PDB4 577 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms