RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 WDR31Q8NA23 367 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 OR4D5Q8NGN0 318 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 TAAR6Q96RI8 345 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 LPAR3Q9UBY5 353 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 NSG2Q9Y328 171 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 J3QW42 95 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 GLAP06280 429 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 GRPP07492 148 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 HLA-DRB3P79483 266 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 FAM76BQ5HYJ3 339 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 ZNF880Q6PDB4 577 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 INO80CQ6PI98 192 aaPredicted RBP14.4□□□□□ -0.1
PHGDH-229ENST00000641891 LILRB1Q8NHL6 650 aaPredicted RBP14.4□□□□□ -0.1
PHGDH-229ENST00000641891 PLPPR1Q8TBJ4 325 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 KIRREL1Q96J84 757 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 PLEKHA2Q9HB19 425 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 TMED3Q9Y3Q3 217 aa14.4□□□□□ -0.1
PHGDH-229ENST00000641891 TRBV6-6A0A0A6YYG2 114 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 OR2H2O95918 312 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 RND3P61587 244 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 TCF15Q12870 199 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 ACSF3Q4G176 576 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-229ENST00000641891 CCDC36Q8IYA8 594 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 SELENOHQ8IZQ5 122 aaKnown RBP14.39□□□□□ -0.11
PHGDH-229ENST00000641891 DMBX1Q8NFW5 382 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 OR4A4PQ8NGN8 299 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 UBALD1Q8TB05 177 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 GTF3AQ92664 365 aaKnown RBP14.39□□□□□ -0.11
PHGDH-229ENST00000641891 SARAFQ96BY9 339 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 RIMS4Q9H426 269 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-229ENST00000641891 WFDC1Q9HC57 220 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 OR1A1Q9P1Q5 309 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 RAB19A4D1S5 217 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 IQCF6A8MYZ5 107 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 RAC2P15153 192 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 COX5AP20674 150 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 LPAR6P43657 344 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 ERVK11-1P61568 191 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 DEFA5Q01523 94 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 ZNF695Q8IW36 515 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 KLF14Q8TD94 323 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-229ENST00000641891 IL1F10Q8WWZ1 152 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 ARL11Q969Q4 196 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 HRH4Q9H3N8 390 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 TMEM231Q9H6L2 316 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 IFT22Q9H7X7 185 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 TINAGQ9UJW2 476 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 FZR1Q9UM11 496 aa14.39□□□□□ -0.11
PHGDH-229ENST00000641891 PRR33A8MZF0 331 aa14.38□□□□□ -0.11
PHGDH-229ENST00000641891 SLC33A1O00400 549 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-229ENST00000641891 ABCD4O14678 606 aa14.38□□□□□ -0.11
PHGDH-229ENST00000641891 NUPL2O15504 423 aaKnown RBP14.38□□□□□ -0.11
PHGDH-229ENST00000641891 ST8SIA3O43173 380 aa14.38□□□□□ -0.11
PHGDH-229ENST00000641891 MED6O75586 246 aa14.38□□□□□ -0.11
PHGDH-229ENST00000641891 CTXN2P0C2S0 81 aa14.38□□□□□ -0.11
PHGDH-229ENST00000641891 CEBPDP49716 269 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-229ENST00000641891 OR8G1Q15617 311 aa14.38□□□□□ -0.11
PHGDH-229ENST00000641891 PXDC1Q5TGL8 231 aa14.38□□□□□ -0.11
PHGDH-229ENST00000641891 ZNF324BQ6AW86 544 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-229ENST00000641891 CXorf67Q86X51 503 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-229ENST00000641891 PRR18Q8N4B5 295 aa14.38□□□□□ -0.11
PHGDH-229ENST00000641891 WNT2BQ93097 391 aa14.38□□□□□ -0.11
PHGDH-229ENST00000641891 LRRC46Q96FV0 321 aa14.38□□□□□ -0.11
PHGDH-229ENST00000641891 TMEM56Q96MV1 263 aa14.38□□□□□ -0.11
PHGDH-229ENST00000641891 NRIP2Q9BQI9 281 aa14.38□□□□□ -0.11
PHGDH-229ENST00000641891 TMEM56-RWDD3S4R434 201 aa14.38□□□□□ -0.11
PHGDH-229ENST00000641891 GPR137BO60478 399 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 NXPH2O95156 264 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 PGA5P0DJD9 388 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 CBR1P16152 277 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 EIF5AP63241 154 aaKnown RBP14.37□□□□□ -0.11
PHGDH-229ENST00000641891 UQCC3Q6UW78 93 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 OR10J5Q8NHC4 309 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 OPN3Q9H1Y3 402 aaPredicted RBP14.37□□□□□ -0.11
PHGDH-229ENST00000641891 POLDIP2Q9Y2S7 368 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 POMT1Q9Y6A1 747 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 TSPAN4O14817 238 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 MLNRO43193 412 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 ADAM20O43506 726 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 WDR1O75083 606 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 IGKV3-15P01624 115 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 GAPDHP04406 335 aaKnown RBP14.37□□□□□ -0.11
PHGDH-229ENST00000641891 ADCYAP1P18509 176 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 HOXC12P31275 282 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 ID4P47928 161 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 SRPXP78539 464 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 NHLH2Q02577 135 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 IGF2-ASQ6U949 168 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 H1FOOQ8IZA3 346 aaPredicted RBP14.37□□□□□ -0.11
PHGDH-229ENST00000641891 ZNF610Q8N9Z0 462 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 SMIM8Q96KF7 97 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 MMP26Q9NRE1 261 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 DKK4Q9UBT3 224 aa14.37□□□□□ -0.11
PHGDH-229ENST00000641891 ERRFI1Q9UJM3 462 aaPredicted RBP14.37□□□□□ -0.11
PHGDH-229ENST00000641891 LOC105371267A0A1B0GV96 52 aa14.36□□□□□ -0.11
PHGDH-229ENST00000641891 ZNF891A8MT65 544 aaPredicted RBP14.36□□□□□ -0.11
PHGDH-229ENST00000641891 PGLYRP1O75594 196 aaPredicted RBP14.36□□□□□ -0.11
PHGDH-229ENST00000641891 CEACAM4O75871 244 aa14.36□□□□□ -0.11
PHGDH-229ENST00000641891 JTBO76095 146 aa14.36□□□□□ -0.11
PHGDH-229ENST00000641891 NXPH3O95157 252 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms