RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 ODAMA1E959 279 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 F5H0A9 414 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-218ENST00000641491 MFNGO00587 321 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 ZNF737O75373 536 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 LPLP06858 475 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 DUX4L2P0CJ85 424 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 DUX4L3P0CJ86 424 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 DUX4L4P0CJ87 422 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 DUX4L5P0CJ88 424 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 DUX4L6P0CJ89 424 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 DUX4L7P0CJ90 424 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 PPIAL4GP0DN37 164 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 CD99P14209 185 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 PTBP1P26599 531 aaKnown RBP eCLIP10.76□□□□□ -0.69
PHGDH-218ENST00000641491 KIR2DS4P43632 304 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 KIR2DS1Q14954 304 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 RNASE12Q5GAN4 147 aaKnown RBP10.76□□□□□ -0.69
PHGDH-218ENST00000641491 METTL11BQ5VVY1 283 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 DUX4L9Q6RFH8 374 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-218ENST00000641491 C17orf107Q6ZR85 190 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 DNM1P46Q6ZS02 220 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 LINC00299Q6ZSB3 139 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 PRR18Q8N4B5 295 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 OR4K15Q8NH41 348 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 CCDC107Q8WV48 283 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 ZNF714Q96N38 554 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 TMUB1Q9BVT8 246 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 DUX4Q9UBX2 424 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 KIF25Q9UIL4 384 aa10.76□□□□□ -0.69
PHGDH-218ENST00000641491 TRAV20A0A0B4J274 112 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 A0A0G2JMP0 313 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 A0A0X1KG70 313 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 POM121CA8CG34 1229 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 SULT1C2O00338 296 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 MSMBP08118 114 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 GSTT2BP0CG30 244 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 AMY2BP19961 511 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 DTYMKP23919 212 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 IL2RGP31785 369 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 AP3S2P59780 193 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 ZNF45Q02386 682 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 ZNF846Q147U1 533 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 ZNF260Q3ZCT1 412 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 CHRFAM7AQ494W8 412 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 PLAC9Q5JTB6 97 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 DCAF12L2Q5VW00 463 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 CYB5R2Q6BCY4 276 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 ZNF497Q6ZNH5 498 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 TPRX1Q8N7U7 411 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 OR4M2Q8NGB6 313 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 MRGPRDQ8TDS7 321 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 NUDCD2Q8WVJ2 157 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 DYRK2Q92630 601 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 TSC22D3Q99576 134 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 DCTN5Q9BTE1 182 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 ST6GALNAC5Q9BVH7 336 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 MIXL1Q9H2W2 232 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 UBE2J1Q9Y385 318 aaPredicted RBP10.75□□□□□ -0.69
PHGDH-218ENST00000641491 LINC00312Q9Y6C7 94 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 ACANP16112 2415 aa10.75□□□□□ -0.69
PHGDH-218ENST00000641491 ZNF469Q96JG9 3925 aaPredicted RBP10.75□□□□□ -0.69
PHGDH-218ENST00000641491 A8MXK9 166 aa10.74□□□□□ -0.69
PHGDH-218ENST00000641491 HSPA12AO43301 675 aa10.74□□□□□ -0.69
PHGDH-218ENST00000641491 RBBP9O75884 186 aa10.74□□□□□ -0.69
PHGDH-218ENST00000641491 GZMHP20718 246 aa10.74□□□□□ -0.69
PHGDH-218ENST00000641491 GATA3P23771 443 aa10.74□□□□□ -0.69
PHGDH-218ENST00000641491 RCVRNP35243 200 aa10.74□□□□□ -0.69
PHGDH-218ENST00000641491 GLIPR1P48060 266 aa10.74□□□□□ -0.69
PHGDH-218ENST00000641491 TMEM50BP56557 158 aa10.74□□□□□ -0.69
PHGDH-218ENST00000641491 LMO4P61968 165 aa10.74□□□□□ -0.69
PHGDH-218ENST00000641491 RSBN1Q5VWQ0 802 aaPredicted RBP10.74□□□□□ -0.69
PHGDH-218ENST00000641491 SIGIRRQ6IA17 410 aa10.74□□□□□ -0.69
PHGDH-218ENST00000641491 TEX29Q8N6K0 151 aa10.74□□□□□ -0.69
PHGDH-218ENST00000641491 PLPPR1Q8TBJ4 325 aa10.74□□□□□ -0.69
PHGDH-218ENST00000641491 GINS4Q9BRT9 223 aa10.74□□□□□ -0.69
PHGDH-218ENST00000641491 SHARPINQ9H0F6 387 aa10.74□□□□□ -0.69
PHGDH-218ENST00000641491 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.74□□□□□ -0.69
PHGDH-218ENST00000641491 TAS2R8Q9NYW2 309 aa10.74□□□□□ -0.69
PHGDH-218ENST00000641491 RPUSD1Q9UJJ7 312 aaKnown RBP10.74□□□□□ -0.69
PHGDH-218ENST00000641491 PRRC2AP48634 2157 aaKnown RBP10.74□□□□□ -0.69
PHGDH-218ENST00000641491 IGHV2-70DA0A0C4DH43 119 aa10.73□□□□□ -0.69
PHGDH-218ENST00000641491 ZNF729A6NN14 1252 aaPredicted RBP10.73□□□□□ -0.69
PHGDH-218ENST00000641491 GABARAPH6UMI1 98 aa10.73□□□□□ -0.69
PHGDH-218ENST00000641491 TNFRSF13BO14836 293 aaPredicted RBP10.73□□□□□ -0.69
PHGDH-218ENST00000641491 TGFAP01135 160 aa10.73□□□□□ -0.69
PHGDH-218ENST00000641491 MT-ND4P03905 459 aa10.73□□□□□ -0.69
PHGDH-218ENST00000641491 FCGR3AP08637 254 aa10.73□□□□□ -0.69
PHGDH-218ENST00000641491 FAUP35544 74 aaKnown RBP10.73□□□□□ -0.69
PHGDH-218ENST00000641491 OR3A3P47888 321 aa10.73□□□□□ -0.69
PHGDH-218ENST00000641491 TAS2R46P59540 309 aa10.73□□□□□ -0.69
PHGDH-218ENST00000641491 SEC61A1P61619 476 aaKnown RBP10.73□□□□□ -0.69
PHGDH-218ENST00000641491 TMEM249Q2WGJ8 235 aa10.73□□□□□ -0.69
PHGDH-218ENST00000641491 TMEM30BQ3MIR4 351 aa10.73□□□□□ -0.69
PHGDH-218ENST00000641491 ACTBL2Q562R1 376 aa10.73□□□□□ -0.69
PHGDH-218ENST00000641491 Q8N402 240 aa10.73□□□□□ -0.69
PHGDH-218ENST00000641491 MAPK1IP1LQ8NDC0 245 aa10.73□□□□□ -0.69
PHGDH-218ENST00000641491 MRPL30Q8TCC3 161 aaKnown RBP10.73□□□□□ -0.69
PHGDH-218ENST00000641491 IL1F10Q8WWZ1 152 aa10.73□□□□□ -0.69
PHGDH-218ENST00000641491 ARL11Q969Q4 196 aa10.73□□□□□ -0.69
PHGDH-218ENST00000641491 GALMQ96C23 342 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms