RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 OR13C5Q8NGS8 318 aa11.08□□□□□ -0.64
LINC00339-211ENST00000641009 TOMM40LQ969M1 308 aa11.08□□□□□ -0.64
LINC00339-211ENST00000641009 PHF21AQ96BD5 680 aa11.08□□□□□ -0.64
LINC00339-211ENST00000641009 ORAI1Q96D31 301 aa11.08□□□□□ -0.64
LINC00339-211ENST00000641009 ING4Q9UNL4 249 aa11.08□□□□□ -0.64
LINC00339-211ENST00000641009 PSG11Q9UQ72 335 aa11.08□□□□□ -0.64
LINC00339-211ENST00000641009 TCRBV4S1A1TA0A5B7 111 aa11.07□□□□□ -0.64
LINC00339-211ENST00000641009 LALBAP00709 142 aa11.07□□□□□ -0.64
LINC00339-211ENST00000641009 PF4V1P10720 104 aa11.07□□□□□ -0.64
LINC00339-211ENST00000641009 DCKP27707 260 aa11.07□□□□□ -0.64
LINC00339-211ENST00000641009 DDI2Q5TDH0 399 aa11.07□□□□□ -0.64
LINC00339-211ENST00000641009 TMPRSS11AQ6ZMR5 421 aa11.07□□□□□ -0.64
LINC00339-211ENST00000641009 SUMF2Q8NBJ7 301 aa11.07□□□□□ -0.64
LINC00339-211ENST00000641009 OR56B4Q8NH76 319 aa11.07□□□□□ -0.64
LINC00339-211ENST00000641009 SGCDQ92629 289 aa11.07□□□□□ -0.64
LINC00339-211ENST00000641009 MYDGFQ969H8 173 aa11.07□□□□□ -0.64
LINC00339-211ENST00000641009 DPCDQ9BVM2 203 aaPredicted RBP11.07□□□□□ -0.64
LINC00339-211ENST00000641009 NCOR1P1Q9H4R4 102 aa11.07□□□□□ -0.64
LINC00339-211ENST00000641009 LINC00574Q9H8X3 128 aa11.07□□□□□ -0.64
LINC00339-211ENST00000641009 TMEM138Q9NPI0 162 aa11.07□□□□□ -0.64
LINC00339-211ENST00000641009 CLEC2DQ9UHP7 191 aa11.07□□□□□ -0.64
LINC00339-211ENST00000641009 ST3GAL6Q9Y274 331 aa11.07□□□□□ -0.64
LINC00339-211ENST00000641009 AMMECR1Q9Y4X0 333 aaPredicted RBP11.07□□□□□ -0.64
LINC00339-211ENST00000641009 A0A1W2PPI3 338 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 FAM90A18PA6NE21 464 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 FAM90A16PA6NEW6 464 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 FAM90A20PA6NIJ5 464 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 FAM90A9PA6NNJ1 464 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 FAM90A12PA8MX19 464 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 FAM90A5PA8MXJ8 464 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 NPIPB11E5RHQ5 1161 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 GEMIN2O14893 280 aaKnown RBP11.06□□□□□ -0.64
LINC00339-211ENST00000641009 OGG1O15527 345 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 OR7C1O76099 320 aaPredicted RBP11.06□□□□□ -0.64
LINC00339-211ENST00000641009 SNRNP70P08621 437 aaKnown RBP11.06□□□□□ -0.64
LINC00339-211ENST00000641009 FAM90A15PP0C7V4 464 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 FAM90A13PP0C7W8 464 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 FAM90A14PP0C7W9 464 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 FAM90A24PP0C7X0 464 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 FAM106CPP0CH98 169 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 IGLL1P15814 213 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 CD33P20138 364 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 SERPINA2P20848 420 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 ZNF93P35789 620 aaPredicted RBP11.06□□□□□ -0.64
LINC00339-211ENST00000641009 KCNJ3P48549 501 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 RBM11P57052 281 aaKnown RBP11.06□□□□□ -0.64
LINC00339-211ENST00000641009 PPP3R1P63098 170 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 PAX5Q02548 391 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 LRRC36Q1X8D7 754 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 REC114Q7Z4M0 266 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 OSR2Q8N2R0 312 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 DRAM1Q8N682 238 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 SMIM19Q96E16 107 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 RDH12Q96NR8 316 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 METTL9Q9H1A3 318 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 ZNF281Q9Y2X9 895 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 MOB4Q9Y3A3 225 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 TSSC4Q9Y5U2 329 aaPredicted RBP11.06□□□□□ -0.64
LINC00339-211ENST00000641009 HSPE1-MOB4S4R3N1 261 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 A0A1W2PP11 408 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 A0A1W2PPE3 182 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 MAGEA13PA6NCF6 341 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 M0QZK8 103 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 EBAG9O00559 213 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 PIN1P1O15428 100 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 CSTBP04080 98 aaKnown RBP11.06□□□□□ -0.64
LINC00339-211ENST00000641009 MYL12AP19105 171 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 BDKRB2P30411 391 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 MADCAM1Q13477 382 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 HES1Q14469 280 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 NHLRC3Q5JS37 347 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 KHDC1LQ5JSQ8 128 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 FOXB2Q5VYV0 432 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 ZFP41Q8N8Y5 198 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 OR4X2Q8NGF9 303 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 OR52N1Q8NH53 320 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 MRAPQ8TCY5 172 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 CYGBQ8WWM9 190 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 IFT22Q9H7X7 185 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 PCDHB16Q9NRJ7 776 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 NECAP2Q9NVZ3 263 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 AURKAIP1Q9NWT8 199 aaPredicted RBP11.06□□□□□ -0.64
LINC00339-211ENST00000641009 BABAM2Q9NXR7 383 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 IL36GQ9NZH8 169 aa11.06□□□□□ -0.64
LINC00339-211ENST00000641009 DIMT1Q9UNQ2 313 aaKnown RBP11.06□□□□□ -0.64
LINC00339-211ENST00000641009 EXOSC1Q9Y3B2 195 aaKnown RBP11.06□□□□□ -0.64
LINC00339-211ENST00000641009 IRGMA1A4Y4 181 aa11.05□□□□□ -0.64
LINC00339-211ENST00000641009 PF4P02776 101 aa11.05□□□□□ -0.64
LINC00339-211ENST00000641009 IGFBP3P17936 291 aaPredicted RBP11.05□□□□□ -0.64
LINC00339-211ENST00000641009 RIPK1Q13546 671 aa11.05□□□□□ -0.64
LINC00339-211ENST00000641009 HNF4GQ14541 408 aa11.05□□□□□ -0.64
LINC00339-211ENST00000641009 THNSL2Q86YJ6 484 aa11.05□□□□□ -0.64
LINC00339-211ENST00000641009 WFDC9Q8NEX5 89 aa11.05□□□□□ -0.64
LINC00339-211ENST00000641009 OR10X1Q8NGY0 326 aa11.05□□□□□ -0.64
LINC00339-211ENST00000641009 UBALD1Q8TB05 177 aa11.05□□□□□ -0.64
LINC00339-211ENST00000641009 GHSRQ92847 366 aa11.05□□□□□ -0.64
LINC00339-211ENST00000641009 S100A13Q99584 98 aa11.05□□□□□ -0.64
LINC00339-211ENST00000641009 ZNF184Q99676 751 aaPredicted RBP11.05□□□□□ -0.64
LINC00339-211ENST00000641009 TRBV5-5A0A0J9YX44 114 aa11.04□□□□□ -0.64
LINC00339-211ENST00000641009 TMEM11P17152 192 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms