RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 HOXB4P17483 251 aaPredicted RBP5.39□□□□□ -1.55
RTTN-215ENST00000639487 CEACAM6P40199 344 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 UBE2NP61088 152 aaKnown RBP5.39□□□□□ -1.55
RTTN-215ENST00000639487 HERV-K104P63124 156 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 PSG7Q13046 419 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 PMS2P11Q13670 270 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 OR52W1Q6IF63 320 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 PLET1Q6UQ28 207 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 WDR82Q6UXN9 313 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 C16orf47Q6ZP98 133 aaPredicted RBP5.39□□□□□ -1.55
RTTN-215ENST00000639487 PEG10Q86TG7 708 aaKnown RBP5.39□□□□□ -1.55
RTTN-215ENST00000639487 WDR86Q86TI4 376 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 OR9Q2Q8NGE9 314 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 OR5R1Q8NH85 324 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 NUDT8Q8WV74 236 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 RNFT2Q96EX2 444 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 PECRQ9BY49 303 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 OR11A1Q9GZK7 315 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 JPT1Q9UK76 154 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 STRAPQ9Y3F4 350 aaKnown RBP5.39□□□□□ -1.55
RTTN-215ENST00000639487 COL6A3P12111 3177 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 A0A1W2PQ09 198 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 DEGS1O15121 323 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 ARL6IP5O75915 188 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 SNRPCP09234 159 aaKnown RBP5.39□□□□□ -1.55
RTTN-215ENST00000639487 PVALBP20472 110 aaPredicted RBP5.39□□□□□ -1.55
RTTN-215ENST00000639487 CX3CR1P49238 355 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 RAB25P57735 213 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 RAB1AP62820 205 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 SNTB2Q13425 540 aaKnown RBP5.39□□□□□ -1.55
RTTN-215ENST00000639487 DHRS7BQ6IAN0 325 aaPredicted RBP5.39□□□□□ -1.55
RTTN-215ENST00000639487 STPG2Q8N412 459 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 TMEM104Q8NE00 496 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 OR11L1Q8NGX0 322 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 OR52J3Q8NH60 311 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 CFHR4Q92496 578 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 GCM1Q9NP62 436 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 ZFHX4Q86UP3 3567 aa5.39□□□□□ -1.55
RTTN-215ENST00000639487 MUC6Q6W4X9 2439 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 K7EPK0 472 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 DCTN6O00399 190 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 ENTPD6O75354 484 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 AGFG2O95081 481 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 IGLV1-47P01700 117 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 APOC3P02656 99 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 S100A11P31949 105 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 HNF4GQ14541 408 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 CLEC9AQ6UXN8 241 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 MYPOPQ86VE0 399 aaPredicted RBP5.38□□□□□ -1.55
RTTN-215ENST00000639487 DMBX1Q8NFW5 382 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 OR5M8Q8NGP6 311 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 DAZAP1Q96EP5 407 aaKnown RBP5.38□□□□□ -1.55
RTTN-215ENST00000639487 JMJD8Q96S16 334 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 GFI1Q99684 422 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 TPPP3Q9BW30 176 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 EGLN3Q9H6Z9 239 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 TP53TG3Q9ULZ0 132 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 FREM3P0C091 2139 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 TRAV38-1A0A0B4J264 116 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 FABP12A6NFH5 140 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 OOEPA6NGQ2 149 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 C5orf52A6NGY3 159 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 H3BML4 177 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 MYL9P24844 172 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 UBE2E1P51965 193 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 ERVS71-1P61550 626 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 PKIAP61925 76 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 RPS27AP62979 156 aaKnown RBP5.38□□□□□ -1.55
RTTN-215ENST00000639487 LAPTM4AQ15012 233 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 SMN1Q16637 294 aaKnown RBP5.38□□□□□ -1.55
RTTN-215ENST00000639487 MICBQ29980 383 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 AVPI1Q5T686 147 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 DHRS11Q6UWP2 260 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 LSRQ86X29 649 aaPredicted RBP5.38□□□□□ -1.55
RTTN-215ENST00000639487 PIP4P2Q8N4L2 257 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 OR2AJ1Q8NGZ0 328 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 FGFBP3Q8TAT2 258 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 GLMPQ8WWB7 406 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 FAM46BQ96A09 425 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 TMEM106AQ96A25 262 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 DPCDQ9BVM2 203 aaPredicted RBP5.38□□□□□ -1.55
RTTN-215ENST00000639487 HCAR1Q9BXC0 346 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 TMEM100Q9NV29 134 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 PGPEP1Q9NXJ5 209 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 COA3Q9Y2R0 106 aaPredicted RBP5.38□□□□□ -1.55
RTTN-215ENST00000639487 KLHDC2Q9Y2U9 406 aa5.38□□□□□ -1.55
RTTN-215ENST00000639487 NPIPA5A0A0B4J1W7 369 aa5.37□□□□□ -1.55
RTTN-215ENST00000639487 A0A1W2PQL4 384 aaPredicted RBP5.37□□□□□ -1.55
RTTN-215ENST00000639487 OR2W5A6NFC9 320 aa5.37□□□□□ -1.55
RTTN-215ENST00000639487 HELTA6NFD8 242 aa5.37□□□□□ -1.55
RTTN-215ENST00000639487 SELENOFO60613 162 aa5.37□□□□□ -1.55
RTTN-215ENST00000639487 NRASP01111 189 aa5.37□□□□□ -1.55
RTTN-215ENST00000639487 IGHV1-8P0DP01 117 aa5.37□□□□□ -1.55
RTTN-215ENST00000639487 GRNP28799 593 aaKnown RBP5.37□□□□□ -1.55
RTTN-215ENST00000639487 C21orf33P30042 268 aaPredicted RBP5.37□□□□□ -1.55
RTTN-215ENST00000639487 RPS19P39019 145 aaKnown RBP5.37□□□□□ -1.55
RTTN-215ENST00000639487 TATDN3Q17R31 274 aa5.37□□□□□ -1.55
RTTN-215ENST00000639487 BSXQ3C1V8 233 aa5.37□□□□□ -1.55
RTTN-215ENST00000639487 ARSJQ5FYB0 599 aaPredicted RBP5.37□□□□□ -1.55
RTTN-215ENST00000639487 TMEM91Q6ZNR0 172 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms