RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 MUC5BQ9HC84 5762 aaPredicted RBP0.52□□□□□ -2.33
CCDC7-211ENST00000638889 TRGV2A0A075B6R0 118 aa0.52□□□□□ -2.33
CCDC7-211ENST00000638889 IGHV3OR15-7A0A075B7D8 119 aa0.52□□□□□ -2.33
CCDC7-211ENST00000638889 VPS37CA5D8V6 355 aaPredicted RBP0.52□□□□□ -2.33
CCDC7-211ENST00000638889 ARGFXA6NJG6 315 aa0.52□□□□□ -2.33
CCDC7-211ENST00000638889 CRYGDP07320 174 aa0.52□□□□□ -2.33
CCDC7-211ENST00000638889 PRB4P10163 310 aaPredicted RBP0.52□□□□□ -2.33
CCDC7-211ENST00000638889 PLTPP55058 493 aa0.52□□□□□ -2.33
CCDC7-211ENST00000638889 RAB25P57735 213 aa0.52□□□□□ -2.33
CCDC7-211ENST00000638889 TAL2Q16559 108 aa0.52□□□□□ -2.33
CCDC7-211ENST00000638889 SSX7Q7RTT5 188 aa0.52□□□□□ -2.33
CCDC7-211ENST00000638889 ZIC4Q8N9L1 334 aa0.52□□□□□ -2.33
CCDC7-211ENST00000638889 CASTOR1Q8WTX7 329 aa0.52□□□□□ -2.33
CCDC7-211ENST00000638889 PDCD6IPQ8WUM4 868 aaKnown RBP0.52□□□□□ -2.33
CCDC7-211ENST00000638889 Q9BRP9 147 aa0.52□□□□□ -2.33
CCDC7-211ENST00000638889 DNAJC27Q9NZQ0 273 aa0.52□□□□□ -2.33
CCDC7-211ENST00000638889 IGKV1-12A0A0C4DH73 117 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 DENND4BO75064 1496 aaPredicted RBP0.51□□□□□ -2.33
CCDC7-211ENST00000638889 IGKV1D-12P01611 117 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 SPAM1P38567 509 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 CLDN8P56748 225 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 DAOAP59103 153 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 ZNF117Q03924 483 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 TSPAN31Q12999 210 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 NDUFAF6Q330K2 333 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 LGALS9CQ6DKI2 356 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 FBXO36Q8NEA4 188 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 OR5T3Q8NGG3 340 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 CLHC1Q8NHS4 586 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 SPPL2BQ8TCT7 592 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 C10orf105Q8TEF2 133 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 GPR22Q99680 433 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 BCL2L14Q9BZR8 327 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 ACOT13Q9NPJ3 140 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 DIABLOQ9NR28 239 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 MTCH2Q9Y6C9 303 aa0.51□□□□□ -2.33
CCDC7-211ENST00000638889 TRPM6Q9BX84 2022 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 AHNAKQ09666 5890 aaKnown RBP0.5□□□□□ -2.33
CCDC7-211ENST00000638889 USP42Q9H9J4 1324 aaKnown RBP0.5□□□□□ -2.33
CCDC7-211ENST00000638889 LOC100653049A0A140TA62 436 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 ARRDC5A6NEK1 342 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 TVP23AA6NH52 213 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 KRT34O76011 436 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 CA2P00918 260 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 CD8AP01732 235 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 RWDD2BP57060 319 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 OR2B6P58173 313 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 HIKESHIQ53FT3 197 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 PIP5KL1Q5T9C9 394 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 CLEC20AQ6ZU45 233 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 ZFAND2AQ8N6M9 145 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 VAT1Q99536 393 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 SPZ1Q9BXG8 430 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 RABL2BQ9UNT1 228 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 POMPQ9Y244 141 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 KPTNQ9Y664 436 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 NCKAP5O14513 1909 aa0.5□□□□□ -2.33
CCDC7-211ENST00000638889 AQRO60306 1485 aaKnown RBP eCLIP0.49□□□□□ -2.33
CCDC7-211ENST00000638889 PTPRJQ12913 1337 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 TMEM250H0YL14 139 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 SPOPO43791 374 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 SOD1P00441 154 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 IGKV5-2P06315 115 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 SLC2A1P11166 492 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 ZNF3P17036 446 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 G6PCP35575 357 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 GCLMP48507 274 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 DOC2AQ14183 400 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 TIMM23BQ5SRD1 257 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 FAM201AQ5SY85 155 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 C10orf107Q8IVU9 208 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 C10orf126Q8N4M7 172 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 SPACA4Q8TDM5 124 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 CLDN23Q96B33 292 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 TMIGD2Q96BF3 282 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 ZNF707Q96C28 371 aaPredicted RBP0.49□□□□□ -2.33
CCDC7-211ENST00000638889 BIRC8Q96P09 236 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 CHID1Q9BWS9 393 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 TAPBPLQ9BX59 468 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 BLZF1Q9H2G9 400 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 DOK5Q9P104 306 aa0.49□□□□□ -2.33
CCDC7-211ENST00000638889 A0A1B0GTQ1 180 aa0.48□□□□□ -2.33
CCDC7-211ENST00000638889 K7EN84 100 aa0.48□□□□□ -2.33
CCDC7-211ENST00000638889 TOR1AO14656 332 aa0.48□□□□□ -2.33
CCDC7-211ENST00000638889 DENRO43583 198 aaKnown RBP0.48□□□□□ -2.33
CCDC7-211ENST00000638889 PDCD6O75340 191 aa0.48□□□□□ -2.33
CCDC7-211ENST00000638889 OR4A8P0C604 315 aa0.48□□□□□ -2.33
CCDC7-211ENST00000638889 CD36P16671 472 aa0.48□□□□□ -2.33
CCDC7-211ENST00000638889 ALOX5APP20292 161 aa0.48□□□□□ -2.33
CCDC7-211ENST00000638889 PEBP1P30086 187 aaKnown RBP0.48□□□□□ -2.33
CCDC7-211ENST00000638889 GTF2H1P32780 548 aa0.48□□□□□ -2.33
CCDC7-211ENST00000638889 ARR3P36575 388 aa0.48□□□□□ -2.33
CCDC7-211ENST00000638889 MAGEA12P43365 314 aa0.48□□□□□ -2.33
CCDC7-211ENST00000638889 RHOAP61586 193 aa0.48□□□□□ -2.33
CCDC7-211ENST00000638889 COA5Q86WW8 74 aa0.48□□□□□ -2.33
CCDC7-211ENST00000638889 DRAXINQ8NBI3 349 aaPredicted RBP0.48□□□□□ -2.33
CCDC7-211ENST00000638889 NELFBQ8WX92 580 aa0.48□□□□□ -2.33
CCDC7-211ENST00000638889 BEX2Q9BXY8 128 aa0.48□□□□□ -2.33
CCDC7-211ENST00000638889 VCX3AQ9NNX9 186 aa0.48□□□□□ -2.33
CCDC7-211ENST00000638889 CHRAC1Q9NRG0 131 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms