RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 DRAM1Q8N682 238 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 OR10A7Q8NGE5 316 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 OR51A2Q8NGJ7 313 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 OR52I1Q8NGK6 324 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 OR56B4Q8NH76 319 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 RFESDQ8TAC1 157 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 PLPPR1Q8TBJ4 325 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 HAVCR2Q8TDQ0 301 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 GPER1Q99527 375 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 DNAH9Q9NYC9 4486 aa14.64□□□□□ -0.07
CLN6-220ENST00000637450 A0A1W2PPI3 338 aa14.63□□□□□ -0.07
CLN6-220ENST00000637450 CLIC3O95833 236 aa14.63□□□□□ -0.07
CLN6-220ENST00000637450 GTF2A1P52655 376 aaPredicted RBP14.63□□□□□ -0.07
CLN6-220ENST00000637450 MADCAM1Q13477 382 aa14.63□□□□□ -0.07
CLN6-220ENST00000637450 RSU1Q15404 277 aa14.63□□□□□ -0.07
CLN6-220ENST00000637450 PIGYQ3MUY2 71 aa14.63□□□□□ -0.07
CLN6-220ENST00000637450 LINC00482Q8N8I6 264 aa14.63□□□□□ -0.07
CLN6-220ENST00000637450 OR10K1Q8NGX5 313 aa14.63□□□□□ -0.07
CLN6-220ENST00000637450 MRGPRDQ8TDS7 321 aa14.63□□□□□ -0.07
CLN6-220ENST00000637450 RGP1Q92546 391 aaPredicted RBP14.63□□□□□ -0.07
CLN6-220ENST00000637450 SLC29A1Q99808 456 aa14.63□□□□□ -0.07
CLN6-220ENST00000637450 JAM3Q9BX67 310 aa14.63□□□□□ -0.07
CLN6-220ENST00000637450 RPL36Q9Y3U8 105 aaKnown RBP14.63□□□□□ -0.07
CLN6-220ENST00000637450 KMT2CQ8NEZ4 4911 aaKnown RBP14.63□□□□□ -0.07
CLN6-220ENST00000637450 LOC100130705A0A1B0GUX0 176 aa14.62□□□□□ -0.07
CLN6-220ENST00000637450 LIMS3P0CW19 117 aa14.62□□□□□ -0.07
CLN6-220ENST00000637450 LIMS4P0CW20 117 aa14.62□□□□□ -0.07
CLN6-220ENST00000637450 SOX2P48431 317 aa14.62□□□□□ -0.07
CLN6-220ENST00000637450 RAB7AP51149 207 aa14.62□□□□□ -0.07
CLN6-220ENST00000637450 LTC4SQ16873 150 aa14.62□□□□□ -0.07
CLN6-220ENST00000637450 KLHL22Q53GT1 634 aa14.62□□□□□ -0.07
CLN6-220ENST00000637450 ZNF329Q86UD4 541 aa14.62□□□□□ -0.07
CLN6-220ENST00000637450 OR8H3Q8N146 312 aa14.62□□□□□ -0.07
CLN6-220ENST00000637450 C5orf56Q8N8D9 126 aa14.62□□□□□ -0.07
CLN6-220ENST00000637450 C9orf16Q9BUW7 83 aa14.62□□□□□ -0.07
CLN6-220ENST00000637450 TAS2R4Q9NYW5 299 aa14.62□□□□□ -0.07
CLN6-220ENST00000637450 TRAV39A0A0B4J263 110 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 FGF16O43320 207 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 HTR3BO95264 441 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 TMEM11P17152 192 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 SSTR5P35346 364 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 GNG10P50151 68 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 EGFEM1PQ0D2K5 195 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 HES1Q14469 280 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 HNF4GQ14541 408 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 CCDC58Q4VC31 144 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 ETV3LQ6ZN32 361 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 MRPL41Q8IXM3 137 aaKnown RBP14.61□□□□□ -0.07
CLN6-220ENST00000637450 SUMF2Q8NBJ7 301 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 GPR148Q8TDV2 347 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 CHPT1Q8WUD6 406 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 NOL4LQ96MY1 436 aaPredicted RBP14.61□□□□□ -0.07
CLN6-220ENST00000637450 DPCDQ9BVM2 203 aaPredicted RBP14.61□□□□□ -0.07
CLN6-220ENST00000637450 FAM192AQ9GZU8 254 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 IFT22Q9H7X7 185 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 FAM118AQ9NWS6 357 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 ZNF581Q9P0T4 197 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 ST3GAL6Q9Y274 331 aa14.61□□□□□ -0.07
CLN6-220ENST00000637450 WI2-2373I1.2A0A1W2PRP0 233 aa14.6□□□□□ -0.07
CLN6-220ENST00000637450 CDRT1O95170 752 aa14.6□□□□□ -0.07
CLN6-220ENST00000637450 GZMHP20718 246 aa14.6□□□□□ -0.07
CLN6-220ENST00000637450 RPL23AP62750 156 aaKnown RBP14.6□□□□□ -0.07
CLN6-220ENST00000637450 EBI3Q14213 229 aa14.6□□□□□ -0.07
CLN6-220ENST00000637450 NHLRC3Q5JS37 347 aa14.6□□□□□ -0.07
CLN6-220ENST00000637450 RPL22L1Q6P5R6 122 aaKnown RBP14.6□□□□□ -0.07
CLN6-220ENST00000637450 OR10X1Q8NGY0 326 aa14.6□□□□□ -0.07
CLN6-220ENST00000637450 APH1BQ8WW43 257 aa14.6□□□□□ -0.07
CLN6-220ENST00000637450 METTL9Q9H1A3 318 aa14.6□□□□□ -0.07
CLN6-220ENST00000637450 FGF20Q9NP95 211 aaPredicted RBP14.6□□□□□ -0.07
CLN6-220ENST00000637450 IL36GQ9NZH8 169 aa14.6□□□□□ -0.07
CLN6-220ENST00000637450 ING4Q9UNL4 249 aa14.6□□□□□ -0.07
CLN6-220ENST00000637450 A0A1W2PPE3 182 aa14.59□□□□□ -0.07
CLN6-220ENST00000637450 IGKV1D-33P01593 117 aa14.59□□□□□ -0.07
CLN6-220ENST00000637450 IGKV1-33P01594 117 aa14.59□□□□□ -0.07
CLN6-220ENST00000637450 IGHG2P01859 326 aa14.59□□□□□ -0.07
CLN6-220ENST00000637450 CD2P06729 351 aa14.59□□□□□ -0.07
CLN6-220ENST00000637450 THBS3P49746 956 aa14.59□□□□□ -0.07
CLN6-220ENST00000637450 ZNF816Q0VGE8 651 aaPredicted RBP14.59□□□□□ -0.07
CLN6-220ENST00000637450 DEFB121Q5J5C9 76 aa14.59□□□□□ -0.07
CLN6-220ENST00000637450 XAF1Q6GPH4 301 aa14.59□□□□□ -0.07
CLN6-220ENST00000637450 C10orf67Q8IYJ2 551 aa14.59□□□□□ -0.07
CLN6-220ENST00000637450 OR51D1Q8NGF3 324 aa14.59□□□□□ -0.07
CLN6-220ENST00000637450 TMEM106AQ96A25 262 aa14.59□□□□□ -0.07
CLN6-220ENST00000637450 TMEM138Q9NPI0 162 aa14.59□□□□□ -0.07
CLN6-220ENST00000637450 ZFP57Q9NU63 452 aa14.59□□□□□ -0.07
CLN6-220ENST00000637450 COL7A1Q02388 2944 aa14.59□□□□□ -0.07
CLN6-220ENST00000637450 SERPINE3A8MV23 424 aa14.58□□□□□ -0.08
CLN6-220ENST00000637450 HSD17B6O14756 317 aa14.58□□□□□ -0.08
CLN6-220ENST00000637450 OR7C1O76099 320 aaPredicted RBP14.58□□□□□ -0.08
CLN6-220ENST00000637450 HOXD3P31249 432 aaPredicted RBP14.58□□□□□ -0.08
CLN6-220ENST00000637450 ZNF93P35789 620 aaPredicted RBP14.58□□□□□ -0.08
CLN6-220ENST00000637450 RBM11P57052 281 aaKnown RBP14.58□□□□□ -0.08
CLN6-220ENST00000637450 SMN1Q16637 294 aaKnown RBP14.58□□□□□ -0.08
CLN6-220ENST00000637450 VAX1Q5SQQ9 334 aa14.58□□□□□ -0.08
CLN6-220ENST00000637450 OR2W3Q7Z3T1 314 aa14.58□□□□□ -0.08
CLN6-220ENST00000637450 OR52N1Q8NH53 320 aa14.58□□□□□ -0.08
CLN6-220ENST00000637450 GPR61Q9BZJ8 451 aa14.58□□□□□ -0.08
CLN6-220ENST00000637450 LINC00527Q9UJ94 153 aa14.58□□□□□ -0.08
CLN6-220ENST00000637450 IGHV1-3A0A0C4DH29 117 aa14.57□□□□□ -0.08
CLN6-220ENST00000637450 C15orf65H3BRN8 121 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms