RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 C7orf50Q9BRJ6 194 aaKnown RBP11.13□□□□□ -0.63
LINC00643-207ENST00000637212 HDHD3Q9BSH5 251 aaPredicted RBP11.13□□□□□ -0.63
LINC00643-207ENST00000637212 PATZ1Q9HBE1 687 aaKnown RBP11.13□□□□□ -0.63
LINC00643-207ENST00000637212 MBNL3Q9NUK0 354 aaKnown RBP11.13□□□□□ -0.63
LINC00643-207ENST00000637212 SLC25A10Q9UBX3 287 aaPredicted RBP11.13□□□□□ -0.63
LINC00643-207ENST00000637212 TRAPPC2LQ9UL33 140 aa11.13□□□□□ -0.63
LINC00643-207ENST00000637212 PCDHB10Q9UN67 800 aa11.13□□□□□ -0.63
LINC00643-207ENST00000637212 KIR2DS1A0A191URI9 304 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 CENPXA8MT69 81 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 VWC2LB2RUY7 222 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 ZNF736B4DX44 427 aaPredicted RBP11.12□□□□□ -0.63
LINC00643-207ENST00000637212 TRDCB7Z8K6 153 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 DVL1O14640 695 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 CD74P04233 296 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 KIR2DS4P43632 304 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 TAS2R46P59540 309 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 DEFA1P59665 94 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 DEFA3P59666 94 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 ASAH1Q13510 395 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 KIR2DS1Q14954 304 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 ATXN7L3Q14CW9 347 aaPredicted RBP11.12□□□□□ -0.63
LINC00643-207ENST00000637212 ACTBL2Q562R1 376 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 ZNF57Q68EA5 555 aaPredicted RBP11.12□□□□□ -0.63
LINC00643-207ENST00000637212 PRSS57Q6UWY2 283 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 ZNF841Q6ZN19 808 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 GVQW1Q8N7I0 195 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 BEST4Q8NFU0 473 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 OR8B3Q8NGG8 313 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 CYYR1Q96J86 154 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 COX4I2Q96KJ9 171 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 OR8B2Q96RD0 313 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 PIMREGQ9BSJ6 248 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 ZNF286AQ9HBT8 521 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 KCNIP1Q9NZI2 227 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 OR6C3Q9NZP0 311 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 LPAR3Q9UBY5 353 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 OPN4Q9UHM6 478 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 ZNF230Q9UIE0 474 aaPredicted RBP11.12□□□□□ -0.63
LINC00643-207ENST00000637212 KIF25Q9UIL4 384 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 ITPR2Q14571 2701 aa11.12□□□□□ -0.63
LINC00643-207ENST00000637212 MEIKINA0A087WXM9 373 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 A0A1B0GW55 424 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 ODAMA1E959 279 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 MEIS3P1A6NDR6 274 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 NAP1L6A6NFF2 107 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 F5H0A9 414 aaPredicted RBP11.11□□□□□ -0.63
LINC00643-207ENST00000637212 PLA2G10O15496 165 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 DIRAS3O95661 229 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 CTXN2P0C2S0 81 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 DUX4L2P0CJ85 424 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 DUX4L3P0CJ86 424 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 DUX4L4P0CJ87 422 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 DUX4L5P0CJ88 424 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 DUX4L6P0CJ89 424 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 DUX4L7P0CJ90 424 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 AKAIN1P0CW23 69 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 NDUFB7P17568 137 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 FAUP35544 74 aaKnown RBP11.11□□□□□ -0.63
LINC00643-207ENST00000637212 GLIPR1P48060 266 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 MEF2DQ14814 521 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 C6orf183Q5T699 404 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 STEAP1BQ6NZ63 245 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 DUX4L9Q6RFH8 374 aaPredicted RBP11.11□□□□□ -0.63
LINC00643-207ENST00000637212 OR5AP2Q8NGF4 316 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 OR4K15Q8NH41 348 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 CTSZQ9UBR2 303 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 DUX4Q9UBX2 424 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 ANXA10Q9UJ72 324 aa11.11□□□□□ -0.63
LINC00643-207ENST00000637212 DYSFO75923 2080 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 TRBV23-1A0A0A0MS06 115 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 hADV38S2A0JD32 116 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 CD3DP04234 171 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 SELLP14151 372 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 RPS2P15880 293 aaKnown RBP11.1□□□□□ -0.63
LINC00643-207ENST00000637212 OR3A3P47888 321 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 EDDM3BP56851 147 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 EDDM3AQ14507 147 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 CHRFAM7AQ494W8 412 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 VAX1Q5SQQ9 334 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 CD276Q5ZPR3 534 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 WDR25Q64LD2 544 aaPredicted RBP11.1□□□□□ -0.63
LINC00643-207ENST00000637212 MZT2BQ6NZ67 158 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 OR4A4PQ8NGN8 299 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 CCDC107Q8WV48 283 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 SNAPC3Q92966 411 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 DMRTB1Q96MA1 342 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 BPESC1Q9GZL8 116 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 LINC00574Q9H8X3 128 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 HRASLSQ9HDD0 168 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 RAB9BQ9NP90 201 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 TAS2R3Q9NYW6 316 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 UBE2J1Q9Y385 318 aaPredicted RBP11.1□□□□□ -0.63
LINC00643-207ENST00000637212 CACNA1DQ01668 2161 aa11.1□□□□□ -0.63
LINC00643-207ENST00000637212 TRGV10A0A0A0MS01 117 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 FABP7O15540 132 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 RAB3DO95716 219 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 CGB3P0DN86 165 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 CGB7P0DN87 165 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 SLC25A16P16260 332 aa11.09□□□□□ -0.63
LINC00643-207ENST00000637212 RCC1P18754 421 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms