RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 SIGLEC16A6NMB1 481 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 IFITM5A6NNB3 132 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 FABP5P3A8MUU1 101 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 C9JAW5 83 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 F6UB75 175 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 NPIPB9F8W1W9 429 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 SMIM22K7EJ46 135 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 K7EQS6 105 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 UPK1AO00322 258 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 SAP18O00422 153 aaKnown RBP2.45□□□□□ -2.02
VIM-210ENST00000637053 IGKV1D-16P01601 117 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 ALPLP05186 524 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 TFAP2AP05549 437 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 CSN2P05814 226 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 UCHL1P09936 223 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 PGA4P0DJD7 388 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 PGA3P0DJD8 388 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 PGA5P0DJD9 388 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 SMIM17P0DL12 118 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 EGR2P11161 476 aaPredicted RBP2.45□□□□□ -2.02
VIM-210ENST00000637053 SLC2A2P11168 524 aaPredicted RBP2.45□□□□□ -2.02
VIM-210ENST00000637053 ATF1P18846 271 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 KLK2P20151 261 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 CNTFRP26992 372 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 PSMB9P28065 219 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 S100A2P29034 98 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 G6PCP35575 357 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 CTRLP40313 264 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 SOX3P41225 446 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 ELK3P41970 407 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 PROK1P58294 105 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 ERVFC1-1P60608 527 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 RND3P61587 244 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 RPS25P62851 125 aaKnown RBP2.45□□□□□ -2.02
VIM-210ENST00000637053 RHOGP84095 191 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 SLC10A2Q12908 348 aaPredicted RBP2.45□□□□□ -2.02
VIM-210ENST00000637053 PAFAH1B3Q15102 231 aaKnown RBP2.45□□□□□ -2.02
VIM-210ENST00000637053 OR7A5Q15622 319 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 CD226Q15762 336 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 UNC50Q53HI1 259 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 SPANXN4Q5MJ08 99 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 PIK3CD-AS1Q5SR53 167 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 FAM201AQ5SY85 155 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 C6orf52Q5T4I8 152 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 TRNP1Q6NT89 227 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 FAAP20Q6NZ36 180 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 PRSS54Q6PEW0 395 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 WDR59Q6PJI9 974 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 IL34Q6ZMJ4 242 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 RBM23Q86U06 439 aaKnown RBP2.45□□□□□ -2.02
VIM-210ENST00000637053 P2RY8Q86VZ1 359 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 TGIF2LYQ8IUE0 185 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 SLC22A18ASQ8N1D0 253 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 FBXL14Q8N1E6 418 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 PACRGLQ8N7B6 248 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 ZNF433Q8N7K0 673 aaPredicted RBP2.45□□□□□ -2.02
VIM-210ENST00000637053 TMEM178AQ8NBL3 297 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 OR52E2Q8NGJ4 325 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 OR1N2Q8NGR9 330 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 OR2A1Q8NGT9 310 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 OR2G3Q8NGZ4 309 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 OR6F1Q8NGZ6 308 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 OR2T4Q8NH00 348 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 OR1L1Q8NH94 360 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 ZNF564Q8TBZ8 553 aaPredicted RBP2.45□□□□□ -2.02
VIM-210ENST00000637053 OR51E1Q8TCB6 317 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 RXFP2Q8WXD0 754 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 TMEM159Q96B96 161 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 RTP4Q96DX8 246 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 DNAJA3Q96EY1 480 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 PAGE5Q96GU1 130 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 FMC1Q96HJ9 113 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 BMFQ96LC9 184 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 TRIB3Q96RU7 358 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 PLEKHF1Q96S99 279 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 MGLLQ99685 303 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 MCHR1Q99705 422 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 KIR2DL4Q99706 377 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 RARRES2Q99969 163 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 KCTD14Q9BQ13 255 aaPredicted RBP2.45□□□□□ -2.02
VIM-210ENST00000637053 MRPL45Q9BRJ2 306 aaKnown RBP2.45□□□□□ -2.02
VIM-210ENST00000637053 C1QTNF4Q9BXJ3 329 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 PRSS22Q9GZN4 317 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 TMEM222Q9H0R3 208 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 OR51E2Q9H255 320 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 SRMSQ9H3Y6 488 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 UBQLN4Q9NRR5 601 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 DNAJC27Q9NZQ0 273 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 SLC23A2Q9UGH3 650 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 TBX21Q9UL17 535 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 MCTS1Q9ULC4 181 aaKnown RBP2.45□□□□□ -2.02
VIM-210ENST00000637053 HIGD1AQ9Y241 93 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 BTRCQ9Y297 605 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 KDM5DQ9BY66 1539 aa2.45□□□□□ -2.02
VIM-210ENST00000637053 FMN1Q68DA7 1419 aa2.44□□□□□ -2.02
VIM-210ENST00000637053 SMARCA4P51532 1647 aa2.44□□□□□ -2.02
VIM-210ENST00000637053 TEX50A0A1B0GTY4 177 aa2.44□□□□□ -2.02
VIM-210ENST00000637053 LOC100130705A0A1B0GUX0 176 aa2.44□□□□□ -2.02
VIM-210ENST00000637053 A0A1B0GW64 132 aa2.44□□□□□ -2.02
VIM-210ENST00000637053 DUXBA0A1W2PPF3 345 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms